RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 SH2D6Q7Z4S9 175 aa6.44□□□□□ -1.38
SHROOM3-207ENST00000485780 ATP5L2Q7Z4Y8 100 aa6.44□□□□□ -1.38
SHROOM3-207ENST00000485780 GATD1Q8NB37 220 aa6.44□□□□□ -1.38
SHROOM3-207ENST00000485780 FRZBQ92765 325 aa6.44□□□□□ -1.38
SHROOM3-207ENST00000485780 BORCS7Q96B45 105 aa6.44□□□□□ -1.38
SHROOM3-207ENST00000485780 TMEM191AQ9H0A3 160 aa6.44□□□□□ -1.38
SHROOM3-207ENST00000485780 DNAH17Q9UFH2 4485 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 M0QY20 66 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 NUDT3O95989 172 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 SMIM17P0DL12 118 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 SRIP30626 198 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 FAM3BP58499 235 aaPredicted RBP6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 RIGQ13278 110 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 ELOBQ15370 118 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 ZNF56Q15929 161 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 NEGR1Q7Z3B1 354 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 UPK3BQ9BT76 320 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 Q9UF83 564 aa6.43□□□□□ -1.38
SHROOM3-207ENST00000485780 FAT2Q9NYQ8 4349 aa6.42□□□□□ -1.38
SHROOM3-207ENST00000485780 TRBV24-1A0A075B6N3 115 aa6.42□□□□□ -1.38
SHROOM3-207ENST00000485780 TRAV9-1A0A075B6T8 112 aa6.42□□□□□ -1.38
SHROOM3-207ENST00000485780 SSTP61278 116 aa6.42□□□□□ -1.38
SHROOM3-207ENST00000485780 HBBP68871 147 aa6.42□□□□□ -1.38
SHROOM3-207ENST00000485780 SUMO4Q6EEV6 95 aa6.42□□□□□ -1.38
SHROOM3-207ENST00000485780 NEXN-AS1Q8NBZ9 246 aa6.42□□□□□ -1.38
SHROOM3-207ENST00000485780 MRPS16Q9Y3D3 137 aaKnown RBP6.42□□□□□ -1.38
SHROOM3-207ENST00000485780 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
SHROOM3-207ENST00000485780 TRBV7-3A0A075B6L6 115 aa6.41□□□□□ -1.38
SHROOM3-207ENST00000485780 H7C1H1 209 aa6.41□□□□□ -1.38
SHROOM3-207ENST00000485780 MGPP08493 103 aa6.41□□□□□ -1.38
SHROOM3-207ENST00000485780 UBE2D3P61077 147 aa6.41□□□□□ -1.38
SHROOM3-207ENST00000485780 UBE2D2P62837 147 aa6.41□□□□□ -1.38
SHROOM3-207ENST00000485780 ESRGQ1W209 222 aa6.41□□□□□ -1.38
SHROOM3-207ENST00000485780 LYPD5Q6UWN5 251 aa6.41□□□□□ -1.38
SHROOM3-207ENST00000485780 SMIM15Q7Z3B0 74 aa6.41□□□□□ -1.38
SHROOM3-207ENST00000485780 RNF185Q96GF1 192 aa6.41□□□□□ -1.38
SHROOM3-207ENST00000485780 C1orf196B1AJZ1 125 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 F5H697 171 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 M0R2N4 97 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 PHOX2AO14813 284 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 S100A8P05109 93 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 CCL18P55774 89 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 RAB5BP61020 215 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 RPL36AP83881 106 aaKnown RBP6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 RASL11AQ6T310 242 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 ATP6V0E2Q8NHE4 81 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 ZNRF2Q8NHG8 242 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 RPL36ALQ969Q0 106 aaKnown RBP6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 BTF3L4Q96K17 158 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 DNAJC30Q96LL9 226 aa6.4□□□□□ -1.38
SHROOM3-207ENST00000485780 GAGE12JA6NER3 117 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 C5orf52A6NGY3 159 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 RAB4AP20338 218 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 GAGE1Q13065 139 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 GAGE4Q13068 117 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 GAGE5Q13069 117 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 GAGE13Q4V321 117 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 FAM104BQ5XKR9 115 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 MRPL54Q6P161 138 aaKnown RBP6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 KCNIP4Q6PIL6 250 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 AMN1Q8IY45 258 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 MRAP2Q96G30 205 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 GTSF1LQ9H1H1 148 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 NIT2Q9NQR4 276 aa6.39□□□□□ -1.39
SHROOM3-207ENST00000485780 IGLV2-18A0A075B6J9 118 aa6.38□□□□□ -1.39
SHROOM3-207ENST00000485780 TGIF2-C20orf24A0A0A6YYL0 155 aa6.38□□□□□ -1.39
SHROOM3-207ENST00000485780 TRAV26-2A0A0B4J265 109 aa6.38□□□□□ -1.39
SHROOM3-207ENST00000485780 TRBV6-5A0A0K0K1A5 114 aa6.38□□□□□ -1.39
SHROOM3-207ENST00000485780 CAMPP49913 170 aa6.38□□□□□ -1.39
SHROOM3-207ENST00000485780 LINC00336Q6ZUF6 198 aa6.38□□□□□ -1.39
SHROOM3-207ENST00000485780 S100PP25815 95 aa6.37□□□□□ -1.39
SHROOM3-207ENST00000485780 LELP1Q5T871 98 aa6.37□□□□□ -1.39
SHROOM3-207ENST00000485780 DAZ4Q86SG3 579 aaKnown RBP6.37□□□□□ -1.39
SHROOM3-207ENST00000485780 NRACQ8N912 160 aa6.37□□□□□ -1.39
SHROOM3-207ENST00000485780 DAZ3Q9NR90 486 aaKnown RBP6.37□□□□□ -1.39
SHROOM3-207ENST00000485780 PKHD1P08F94 4074 aa6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 GAS8-AS1O95177 125 aa6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 RPS10P46783 165 aaKnown RBP6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 MRPL51Q4U2R6 128 aaKnown RBP6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 Q6ZR54 194 aa6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 TMEM136Q6ZRR5 245 aa6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 RPL39LQ96EH5 51 aaKnown RBP6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 TNFRSF18Q9Y5U5 241 aa6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 URGCP-MRPS24S4R325 110 aa6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 DYNC1H1Q14204 4646 aaKnown RBP6.36□□□□□ -1.39
SHROOM3-207ENST00000485780 PPP1R17O96001 155 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 PPBPP02775 128 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 DNAH10OSP0CZ25 163 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 SNRPEP62304 92 aaKnown RBP6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 RPL32P62910 135 aaKnown RBP6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 COX19Q49B96 90 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 TMEM97Q5BJF2 176 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 OR10J3Q5JRS4 329 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 NTM-AS1Q6ZSK4 140 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 WFDC10BQ8IUB3 73 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 Q9H8V8 135 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 PKD1P98161 4303 aa6.35□□□□□ -1.39
SHROOM3-207ENST00000485780 TRBV6-8A0A0A6YYG3 113 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 TRBV27A0A0K0K1C4 114 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 SDHAF1A6NFY7 115 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms