RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 SLC25A5P05141 298 aaKnown RBP3.75□□□□□ -1.81
CCDC39-205ENST00000485055 PRSS2P07478 247 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 SLC25A6P12236 298 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 PRCDQ00LT1 54 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 PEA15Q15121 130 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 KHDC3LQ587J8 217 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 Q6ZUT4 128 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 RNF182Q8N6D2 247 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 TOMM6Q96B49 74 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 DHRS4-AS1Q9P1J3 65 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 TRAV13-1A0A0B4J241 112 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 I3L2K1 104 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 PITX3O75364 302 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 IGKV1-5P01602 117 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 RRN3P1Q2M238 152 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 CASC10Q5T4H9 136 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 NPVFQ9HCQ7 196 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 COL7A1Q02388 2944 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 COLCA2A8K830 154 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 E7EUB6 86 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 NCR2O95944 276 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 CBLN1P23435 193 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 C9orf153Q5TBE3 101 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 PRSS3P2Q8NHM4 247 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 CELA1Q9UNI1 258 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 LYSTQ99698 3801 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 K7EIM0 57 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 ETV6P41212 452 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 ZNF846Q147U1 533 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 C15orf32Q32M92 178 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 KCNRGQ8N5I3 272 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 PYGO2Q9BRQ0 406 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 NACAE9PAV3 2078 aa3.74□□□□□ -1.81
CCDC39-205ENST00000485055 IGHV1-58A0A0C4DH39 117 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 A8MTW9 85 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 H3BQ15 152 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 IGKV1-39P01597 117 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 IGKV1D-39P04432 117 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 NMBP08949 121 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 ELK1P19419 428 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 NFYAP23511 347 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-205ENST00000485055 SNRPD3P62318 126 aaKnown RBP3.73□□□□□ -1.81
CCDC39-205ENST00000485055 C11orf87Q6NUJ2 197 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 ZNF575Q86XF7 245 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 SVBPQ8N300 66 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 OR5H2Q8NGV7 314 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 VSIG2Q96IQ7 327 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 EPDR1Q9UM22 224 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 KLK5Q9Y337 293 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-205ENST00000485055 MRPS16Q9Y3D3 137 aaKnown RBP3.73□□□□□ -1.81
CCDC39-205ENST00000485055 CST7O76096 145 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 LTAP01374 205 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 HBBP68871 147 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 WT1-ASQ06250 92 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 LINC00299Q6ZSB3 139 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 OR4B1Q8NGF8 309 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 SMIM4Q8WVI0 70 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 OCR1Q9BZK8 76 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 RPRMQ9NS64 109 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 PRAC2D3DTV9 90 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 PRB2P02812 416 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-205ENST00000485055 CTSGP08311 255 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 LGALS3P17931 250 aaKnown RBP3.73□□□□□ -1.81
CCDC39-205ENST00000485055 INPP1P49441 399 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 TMEM258P61165 79 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 YPEL3P61236 119 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-205ENST00000485055 C2orf83Q53S99 150 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 NMSQ5H8A3 153 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 ATOH7Q8N100 152 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 HIST3H2BBQ8N257 126 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 CSNK1G2-AS1Q8NCQ2 148 aa3.73□□□□□ -1.81
CCDC39-205ENST00000485055 FAM103A1Q9BTL3 118 aaKnown RBP3.73□□□□□ -1.81
CCDC39-205ENST00000485055 WNK1Q9H4A3 2382 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 GRIFINA4D1Z8 144 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 MEIS3P1A6NDR6 274 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 ZNF90Q03938 601 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 TMEM183BQ1AE95 376 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 DEFB121Q5J5C9 76 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 OR8A1Q8NGG7 326 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 SLC25A22Q9H936 323 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 IGHV3-16A0A0C4DH30 117 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 PYYP10082 97 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 FABP4P15090 132 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 IQCJQ1A5X6 159 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 RBMXL1Q96E39 390 aaKnown RBP3.72□□□□□ -1.81
CCDC39-205ENST00000485055 TUBA4BQ9H853 241 aa3.72□□□□□ -1.81
CCDC39-205ENST00000485055 A0A0D9SG52 128 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 IGHV7-4-1A0A0J9YVY3 117 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 CRYM-AS1A6NIL9 109 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 SLC25A4P12235 298 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 FHL2Q14192 279 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 TWIST1Q15672 202 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 ORMDL2Q53FV1 153 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 DAND5Q8N907 189 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 PARLQ9H300 379 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 RNASE2P10153 161 aaKnown RBP3.71□□□□□ -1.82
CCDC39-205ENST00000485055 LGALS9BQ3B8N2 356 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 ZC2HC1BQ5TFG8 222 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 LGALS9CQ6DKI2 356 aa3.71□□□□□ -1.82
CCDC39-205ENST00000485055 MORN3Q6PF18 240 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms