RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 A0A087WWC5 75 aa10.95□□□□□ -0.66
DDR1-246ENST00000485023 BTF3P20290 206 aaKnown RBP10.95□□□□□ -0.66
DDR1-246ENST00000485023 ADIRFQ15847 76 aa10.95□□□□□ -0.66
DDR1-246ENST00000485023 A8MWL6 223 aa10.94□□□□□ -0.66
DDR1-246ENST00000485023 TMEM241Q24JQ0 296 aa10.94□□□□□ -0.66
DDR1-246ENST00000485023 NFE4Q86UQ8 179 aa10.94□□□□□ -0.66
DDR1-246ENST00000485023 DPH3P1Q9H4G8 78 aa10.94□□□□□ -0.66
DDR1-246ENST00000485023 K7EP13 123 aa10.93□□□□□ -0.66
DDR1-246ENST00000485023 M0QY20 66 aa10.93□□□□□ -0.66
DDR1-246ENST00000485023 RPL23P62829 140 aaKnown RBP10.93□□□□□ -0.66
DDR1-246ENST00000485023 SPATA12Q7Z6I5 190 aa10.93□□□□□ -0.66
DDR1-246ENST00000485023 DAZ4Q86SG3 579 aaKnown RBP10.93□□□□□ -0.66
DDR1-246ENST00000485023 ISOC2Q96AB3 205 aa10.93□□□□□ -0.66
DDR1-246ENST00000485023 CNFNQ9BYD5 112 aa10.93□□□□□ -0.66
DDR1-246ENST00000485023 DAZ3Q9NR90 486 aaKnown RBP10.93□□□□□ -0.66
DDR1-246ENST00000485023 IBA57-AS1B1ANH7 110 aa10.92□□□□□ -0.66
DDR1-246ENST00000485023 H7C1H1 209 aa10.92□□□□□ -0.66
DDR1-246ENST00000485023 FOXA3P55318 350 aaPredicted RBP10.92□□□□□ -0.66
DDR1-246ENST00000485023 FAM74A3Q4VXF1 159 aa10.92□□□□□ -0.66
DDR1-246ENST00000485023 CT83Q5H943 113 aa10.92□□□□□ -0.66
DDR1-246ENST00000485023 WDR73Q6P4I2 378 aa10.92□□□□□ -0.66
DDR1-246ENST00000485023 C15orf54Q8N8G6 183 aa10.92□□□□□ -0.66
DDR1-246ENST00000485023 OSTCQ9NRP0 149 aa10.92□□□□□ -0.66
DDR1-246ENST00000485023 NAT8Q9UHE5 227 aa10.92□□□□□ -0.66
DDR1-246ENST00000485023 URGCP-MRPS24S4R325 110 aa10.92□□□□□ -0.66
DDR1-246ENST00000485023 TRAV26-2A0A0B4J265 109 aa10.91□□□□□ -0.66
DDR1-246ENST00000485023 RAB14P61106 215 aa10.91□□□□□ -0.66
DDR1-246ENST00000485023 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.91□□□□□ -0.66
DDR1-246ENST00000485023 DEFB104AQ8WTQ1 72 aa10.91□□□□□ -0.66
DDR1-246ENST00000485023 TSKUQ8WUA8 353 aa10.91□□□□□ -0.66
DDR1-246ENST00000485023 BORCS7Q96B45 105 aa10.91□□□□□ -0.66
DDR1-246ENST00000485023 TRBV6-8A0A0A6YYG3 113 aa10.9□□□□□ -0.66
DDR1-246ENST00000485023 HIGD1CA8MV81 97 aa10.9□□□□□ -0.66
DDR1-246ENST00000485023 C16orf90A8MZG2 172 aa10.9□□□□□ -0.66
DDR1-246ENST00000485023 PSCAO43653 123 aa10.9□□□□□ -0.66
DDR1-246ENST00000485023 FUSP35637 526 aaKnown RBP eCLIP10.9□□□□□ -0.66
DDR1-246ENST00000485023 KRTAP10-2P60368 255 aa10.9□□□□□ -0.66
DDR1-246ENST00000485023 RASL11AQ6T310 242 aa10.9□□□□□ -0.66
DDR1-246ENST00000485023 SMIM15Q7Z3B0 74 aa10.9□□□□□ -0.66
DDR1-246ENST00000485023 NIT1Q86X76 327 aa10.9□□□□□ -0.66
DDR1-246ENST00000485023 V9GYV3 84 aa10.9□□□□□ -0.66
DDR1-246ENST00000485023 A0A087WX48 190 aa10.89□□□□□ -0.67
DDR1-246ENST00000485023 TMEM262E9PQX1 116 aa10.89□□□□□ -0.67
DDR1-246ENST00000485023 CHCHD5Q9BSY4 110 aa10.89□□□□□ -0.67
DDR1-246ENST00000485023 SMDT1Q9H4I9 107 aa10.89□□□□□ -0.67
DDR1-246ENST00000485023 KIAA1109Q2LD37 5005 aa10.89□□□□□ -0.67
DDR1-246ENST00000485023 KCNIP4Q6PIL6 250 aa10.88□□□□□ -0.67
DDR1-246ENST00000485023 NTM-AS1Q6ZSK4 140 aa10.88□□□□□ -0.67
DDR1-246ENST00000485023 DNAJC30Q96LL9 226 aa10.88□□□□□ -0.67
DDR1-246ENST00000485023 KLK12Q9UKR0 248 aa10.88□□□□□ -0.67
DDR1-246ENST00000485023 A0A087WTM6 91 aa10.87□□□□□ -0.67
DDR1-246ENST00000485023 GATD1Q8NB37 220 aa10.87□□□□□ -0.67
DDR1-246ENST00000485023 GFRA4Q9GZZ7 299 aa10.87□□□□□ -0.67
DDR1-246ENST00000485023 NIT2Q9NQR4 276 aa10.87□□□□□ -0.67
DDR1-246ENST00000485023 A0A1B0GUT8 65 aa10.86□□□□□ -0.67
DDR1-246ENST00000485023 EREGO14944 169 aa10.86□□□□□ -0.67
DDR1-246ENST00000485023 GAGE6Q13070 117 aa10.86□□□□□ -0.67
DDR1-246ENST00000485023 LAGE3Q14657 143 aa10.86□□□□□ -0.67
DDR1-246ENST00000485023 MPV17L2Q567V2 206 aa10.86□□□□□ -0.67
DDR1-246ENST00000485023 NUP35Q8NFH5 326 aa10.86□□□□□ -0.67
DDR1-246ENST00000485023 RPL39LQ96EH5 51 aaKnown RBP10.86□□□□□ -0.67
DDR1-246ENST00000485023 TRBV25-1A0A075B6N4 114 aa10.85□□□□□ -0.67
DDR1-246ENST00000485023 DNAH5Q8TE73 4624 aa10.85□□□□□ -0.67
DDR1-246ENST00000485023 FAM231BA6NCW3 169 aa10.84□□□□□ -0.67
DDR1-246ENST00000485023 IFITM2Q01629 132 aa10.84□□□□□ -0.67
DDR1-246ENST00000485023 TMEM97Q5BJF2 176 aa10.84□□□□□ -0.67
DDR1-246ENST00000485023 CLLU1Q5K131 121 aa10.84□□□□□ -0.67
DDR1-246ENST00000485023 Q8N976 141 aa10.84□□□□□ -0.67
DDR1-246ENST00000485023 UBE2WQ96B02 151 aa10.84□□□□□ -0.67
DDR1-246ENST00000485023 NAT8BQ9UHF3 227 aa10.84□□□□□ -0.67
DDR1-246ENST00000485023 LRP1BQ9NZR2 4599 aa10.84□□□□□ -0.67
DDR1-246ENST00000485023 TRAV8-3A0A0A6YYJ7 113 aa10.83□□□□□ -0.68
DDR1-246ENST00000485023 IGHV1-24A0A0C4DH33 117 aa10.83□□□□□ -0.68
DDR1-246ENST00000485023 IGKV2D-24A0A075B6R9 120 aa10.82□□□□□ -0.68
DDR1-246ENST00000485023 LECT2O14960 151 aa10.82□□□□□ -0.68
DDR1-246ENST00000485023 GAS8-AS1O95177 125 aa10.82□□□□□ -0.68
DDR1-246ENST00000485023 RIGQ13278 110 aa10.82□□□□□ -0.68
DDR1-246ENST00000485023 ATRAIDQ6UW56 229 aa10.82□□□□□ -0.68
DDR1-246ENST00000485023 CLPSL2Q6UWE3 100 aa10.82□□□□□ -0.68
DDR1-246ENST00000485023 AMN1Q8IY45 258 aa10.82□□□□□ -0.68
DDR1-246ENST00000485023 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
DDR1-246ENST00000485023 TM2D2Q9BX73 214 aa10.82□□□□□ -0.68
DDR1-246ENST00000485023 SMIM27A0A1W2PRY6 76 aa10.81□□□□□ -0.68
DDR1-246ENST00000485023 CRPP02741 224 aa10.81□□□□□ -0.68
DDR1-246ENST00000485023 ANGP03950 147 aaKnown RBP10.81□□□□□ -0.68
DDR1-246ENST00000485023 ELOBQ15370 118 aa10.81□□□□□ -0.68
DDR1-246ENST00000485023 IQCJQ1A5X6 159 aa10.81□□□□□ -0.68
DDR1-246ENST00000485023 TMEM191AQ9H0A3 160 aa10.81□□□□□ -0.68
DDR1-246ENST00000485023 LRCOL1A6NCL2 159 aa10.8□□□□□ -0.68
DDR1-246ENST00000485023 AMTP48728 403 aa10.8□□□□□ -0.68
DDR1-246ENST00000485023 CAMPP49913 170 aa10.8□□□□□ -0.68
DDR1-246ENST00000485023 RBX1P62877 108 aa10.8□□□□□ -0.68
DDR1-246ENST00000485023 COTL1Q14019 142 aa10.8□□□□□ -0.68
DDR1-246ENST00000485023 WFDC2Q14508 124 aa10.8□□□□□ -0.68
DDR1-246ENST00000485023 RNF185Q96GF1 192 aa10.8□□□□□ -0.68
DDR1-246ENST00000485023 TMEM243Q9BU79 118 aa10.8□□□□□ -0.68
DDR1-246ENST00000485023 SMKR1H3BMG3 65 aa10.79□□□□□ -0.68
DDR1-246ENST00000485023 NCR2O95944 276 aa10.79□□□□□ -0.68
DDR1-246ENST00000485023 PKIAP61925 76 aa10.79□□□□□ -0.68
DDR1-246ENST00000485023 MRPL54Q6P161 138 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms