RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 DAZAP1Q96EP5 407 aaKnown RBP13.24□□□□□ -0.29
ACTB-212ENST00000484841 MANBALQ9NQG1 85 aa13.24□□□□□ -0.29
ACTB-212ENST00000484841 RPL35P42766 123 aaKnown RBP13.23□□□□□ -0.29
ACTB-212ENST00000484841 AP1S3Q96PC3 154 aa13.23□□□□□ -0.29
ACTB-212ENST00000484841 SSBP4Q9BWG4 385 aaPredicted RBP13.23□□□□□ -0.29
ACTB-212ENST00000484841 GNG13Q9P2W3 67 aa13.23□□□□□ -0.29
ACTB-212ENST00000484841 MPV17L2Q567V2 206 aa13.21□□□□□ -0.29
ACTB-212ENST00000484841 EIF5AL1Q6IS14 154 aaKnown RBP13.21□□□□□ -0.29
ACTB-212ENST00000484841 TPPP3Q9BW30 176 aa13.21□□□□□ -0.29
ACTB-212ENST00000484841 HLA-DQA1P01909 254 aa13.2□□□□□ -0.3
ACTB-212ENST00000484841 RPS20P60866 119 aaKnown RBP13.2□□□□□ -0.3
ACTB-212ENST00000484841 ENHOQ6UWT2 76 aa13.2□□□□□ -0.3
ACTB-212ENST00000484841 SCXQ7RTU7 201 aa13.2□□□□□ -0.3
ACTB-212ENST00000484841 DEFB104AQ8WTQ1 72 aa13.2□□□□□ -0.3
ACTB-212ENST00000484841 DERL1Q9BUN8 251 aa13.2□□□□□ -0.3
ACTB-212ENST00000484841 TRBV25-1A0A075B6N4 114 aa13.19□□□□□ -0.3
ACTB-212ENST00000484841 H7C1H1 209 aa13.19□□□□□ -0.3
ACTB-212ENST00000484841 MGPP08493 103 aa13.19□□□□□ -0.3
ACTB-212ENST00000484841 MIAQ16674 131 aa13.19□□□□□ -0.3
ACTB-212ENST00000484841 RAB5CP51148 216 aa13.18□□□□□ -0.3
ACTB-212ENST00000484841 OR2D3Q8NGH3 330 aa13.18□□□□□ -0.3
ACTB-212ENST00000484841 CHAC1Q9BUX1 264 aa13.18□□□□□ -0.3
ACTB-212ENST00000484841 XKRY2A2RUG3 117 aa13.17□□□□□ -0.3
ACTB-212ENST00000484841 CACNG7P62955 275 aa13.17□□□□□ -0.3
ACTB-212ENST00000484841 CENPWQ5EE01 88 aa13.17□□□□□ -0.3
ACTB-212ENST00000484841 FER1L6-AS1Q8NA97 138 aa13.17□□□□□ -0.3
ACTB-212ENST00000484841 FAT1Q14517 4588 aa13.16□□□□□ -0.3
ACTB-212ENST00000484841 GNG4P50150 75 aa13.16□□□□□ -0.3
ACTB-212ENST00000484841 GAGE6Q13070 117 aa13.16□□□□□ -0.3
ACTB-212ENST00000484841 C11orf52Q96A22 123 aa13.16□□□□□ -0.3
ACTB-212ENST00000484841 VAX2Q9UIW0 290 aa13.16□□□□□ -0.3
ACTB-212ENST00000484841 IGHV1-24A0A0C4DH33 117 aa13.15□□□□□ -0.3
ACTB-212ENST00000484841 USP17L23D6RBM5 183 aa13.15□□□□□ -0.3
ACTB-212ENST00000484841 IFNA1P01562 189 aa13.15□□□□□ -0.3
ACTB-212ENST00000484841 CCL20P78556 96 aa13.15□□□□□ -0.3
ACTB-212ENST00000484841 BIN3Q9NQY0 253 aa13.15□□□□□ -0.3
ACTB-212ENST00000484841 KIF25-AS1Q9Y6Z4 181 aa13.15□□□□□ -0.3
ACTB-212ENST00000484841 DMBT1Q9UGM3 2413 aaPredicted RBP13.14□□□□□ -0.31
ACTB-212ENST00000484841 VPS13BQ7Z7G8 4022 aa13.14□□□□□ -0.31
ACTB-212ENST00000484841 TRAV1-1A0A0B4J248 108 aa13.14□□□□□ -0.31
ACTB-212ENST00000484841 GZMBP10144 247 aa13.14□□□□□ -0.31
ACTB-212ENST00000484841 CLPSL2Q6UWE3 100 aa13.14□□□□□ -0.31
ACTB-212ENST00000484841 NTM-AS1Q6ZSK4 140 aa13.14□□□□□ -0.31
ACTB-212ENST00000484841 SMIM12Q96EX1 92 aa13.14□□□□□ -0.31
ACTB-212ENST00000484841 F2Z2F3 143 aa13.13□□□□□ -0.31
ACTB-212ENST00000484841 PDE6DO43924 150 aa13.13□□□□□ -0.31
ACTB-212ENST00000484841 P01737 135 aa13.13□□□□□ -0.31
ACTB-212ENST00000484841 RBX1P62877 108 aa13.13□□□□□ -0.31
ACTB-212ENST00000484841 LINC00269Q8N2A0 174 aa13.13□□□□□ -0.31
ACTB-212ENST00000484841 CIRBP-AS1Q8TBR5 109 aa13.13□□□□□ -0.31
ACTB-212ENST00000484841 SRRM2Q9UQ35 2752 aaKnown RBP13.13□□□□□ -0.31
ACTB-212ENST00000484841 FLG2Q5D862 2391 aaPredicted RBP13.13□□□□□ -0.31
ACTB-212ENST00000484841 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
ACTB-212ENST00000484841 MEF2BQ02080 365 aaPredicted RBP13.12□□□□□ -0.31
ACTB-212ENST00000484841 MED9Q9NWA0 146 aa13.12□□□□□ -0.31
ACTB-212ENST00000484841 RAB19A4D1S5 217 aa13.11□□□□□ -0.31
ACTB-212ENST00000484841 M0QY20 66 aa13.11□□□□□ -0.31
ACTB-212ENST00000484841 IGLC6P0CF74 106 aa13.11□□□□□ -0.31
ACTB-212ENST00000484841 IQCJQ1A5X6 159 aa13.11□□□□□ -0.31
ACTB-212ENST00000484841 SUMO4Q6EEV6 95 aa13.11□□□□□ -0.31
ACTB-212ENST00000484841 DGAT2L7PQ6IED9 249 aa13.11□□□□□ -0.31
ACTB-212ENST00000484841 IGLV2-8P01709 118 aa13.1□□□□□ -0.31
ACTB-212ENST00000484841 PRR34Q9NV39 138 aa13.1□□□□□ -0.31
ACTB-212ENST00000484841 C19orf71A6NCJ1 209 aa13.09□□□□□ -0.31
ACTB-212ENST00000484841 KRTAP29-1A8MX34 341 aaPredicted RBP13.09□□□□□ -0.31
ACTB-212ENST00000484841 UBE2L6O14933 153 aa13.09□□□□□ -0.31
ACTB-212ENST00000484841 SULT1A2P50226 295 aa13.09□□□□□ -0.31
ACTB-212ENST00000484841 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
ACTB-212ENST00000484841 REG3AQ06141 175 aa13.09□□□□□ -0.31
ACTB-212ENST00000484841 RASL11AQ6T310 242 aa13.09□□□□□ -0.31
ACTB-212ENST00000484841 TMEM243Q9BU79 118 aa13.09□□□□□ -0.31
ACTB-212ENST00000484841 DPH3P1Q9H4G8 78 aa13.09□□□□□ -0.31
ACTB-212ENST00000484841 PRSS1P07477 247 aa13.08□□□□□ -0.32
ACTB-212ENST00000484841 CLRN3Q8NCR9 226 aa13.08□□□□□ -0.32
ACTB-212ENST00000484841 LYZL1Q6UWQ5 148 aa13.07□□□□□ -0.32
ACTB-212ENST00000484841 NIT2Q9NQR4 276 aa13.07□□□□□ -0.32
ACTB-212ENST00000484841 IGLV10-54A0A075B6I4 117 aa13.06□□□□□ -0.32
ACTB-212ENST00000484841 TRAV8-4A0A0B4J246 113 aa13.06□□□□□ -0.32
ACTB-212ENST00000484841 NTF3P20783 257 aa13.06□□□□□ -0.32
ACTB-212ENST00000484841 HERC1Q15751 4861 aa13.06□□□□□ -0.32
ACTB-212ENST00000484841 BCL2P10415 239 aa13.05□□□□□ -0.32
ACTB-212ENST00000484841 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
ACTB-212ENST00000484841 C9orf163Q8N9P6 203 aa13.05□□□□□ -0.32
ACTB-212ENST00000484841 RPL37AP61513 92 aaKnown RBP13.04□□□□□ -0.32
ACTB-212ENST00000484841 COTL1Q14019 142 aa13.04□□□□□ -0.32
ACTB-212ENST00000484841 TWIST1Q15672 202 aa13.04□□□□□ -0.32
ACTB-212ENST00000484841 WDR73Q6P4I2 378 aa13.04□□□□□ -0.32
ACTB-212ENST00000484841 SLC51BQ86UW2 128 aa13.04□□□□□ -0.32
ACTB-212ENST00000484841 PGLYRP4Q96LB8 373 aa13.04□□□□□ -0.32
ACTB-212ENST00000484841 AP5S1Q9NUS5 200 aa13.04□□□□□ -0.32
ACTB-212ENST00000484841 A0A1B0GUV1 79 aa13.03□□□□□ -0.32
ACTB-212ENST00000484841 AMTP48728 403 aa13.03□□□□□ -0.32
ACTB-212ENST00000484841 C9orf62Q8N4C0 152 aa13.03□□□□□ -0.32
ACTB-212ENST00000484841 C20orf203Q8NBC4 194 aa13.03□□□□□ -0.32
ACTB-212ENST00000484841 NUDT10Q8NFP7 164 aa13.03□□□□□ -0.32
ACTB-212ENST00000484841 NUDT11Q96G61 164 aa13.03□□□□□ -0.32
ACTB-212ENST00000484841 DNAH8Q96JB1 4490 aa13.03□□□□□ -0.32
ACTB-212ENST00000484841 hDV102S1A0JD36 115 aa13.02□□□□□ -0.33
ACTB-212ENST00000484841 SMIM15Q7Z3B0 74 aa13.02□□□□□ -0.33
ACTB-212ENST00000484841 RPP21Q9H633 154 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms