RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 RBBP6Q7Z6E9 1792 aaKnown RBP0.76□□□□□ -2.29
SMC4-215ENST00000484799 NWD2Q9ULI1 1742 aa0.76□□□□□ -2.29
SMC4-215ENST00000484799 MBD5Q9P267 1494 aa0.76□□□□□ -2.29
SMC4-215ENST00000484799 WDR7Q9Y4E6 1490 aa0.76□□□□□ -2.29
SMC4-215ENST00000484799 APOC4-APOC2K7ER74 178 aa0.76□□□□□ -2.29
SMC4-215ENST00000484799 SPINK7P58062 85 aa0.76□□□□□ -2.29
SMC4-215ENST00000484799 NALCNQ8IZF0 1738 aa0.75□□□□□ -2.29
SMC4-215ENST00000484799 LRRC37A3O60309 1634 aa0.75□□□□□ -2.29
SMC4-215ENST00000484799 ROCK2O75116 1388 aaKnown RBP0.75□□□□□ -2.29
SMC4-215ENST00000484799 F5P12259 2224 aa0.75□□□□□ -2.29
SMC4-215ENST00000484799 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.75□□□□□ -2.29
SMC4-215ENST00000484799 SPTSSBQ8NFR3 76 aa0.75□□□□□ -2.29
SMC4-215ENST00000484799 PRR15LQ9BU68 103 aa0.75□□□□□ -2.29
SMC4-215ENST00000484799 PXDNQ92626 1479 aa0.74□□□□□ -2.29
SMC4-215ENST00000484799 SMG6Q86US8 1419 aaKnown RBP0.74□□□□□ -2.29
SMC4-215ENST00000484799 EDDM3BP56851 147 aa0.74□□□□□ -2.29
SMC4-215ENST00000484799 Q56UQ5 140 aa0.74□□□□□ -2.29
SMC4-215ENST00000484799 S100A7L2Q5SY68 101 aa0.74□□□□□ -2.29
SMC4-215ENST00000484799 SMIM11BQ8TCY0 68 aa0.74□□□□□ -2.29
SMC4-215ENST00000484799 FAM103A1Q9BTL3 118 aaKnown RBP0.74□□□□□ -2.29
SMC4-215ENST00000484799 TNS1Q9HBL0 1735 aaKnown RBP0.74□□□□□ -2.29
SMC4-215ENST00000484799 EIF4G3O43432 1585 aaKnown RBP0.74□□□□□ -2.29
SMC4-215ENST00000484799 DLEU1O43261 78 aa0.73□□□□□ -2.29
SMC4-215ENST00000484799 AKAIN1P0CW23 69 aa0.73□□□□□ -2.29
SMC4-215ENST00000484799 PLAC8Q9NZF1 115 aa0.73□□□□□ -2.29
SMC4-215ENST00000484799 BDP1A6H8Y1 2624 aa0.73□□□□□ -2.29
SMC4-215ENST00000484799 KCPQ6ZWJ8 1503 aa0.73□□□□□ -2.29
SMC4-215ENST00000484799 MYO7AQ13402 2215 aa0.72□□□□□ -2.29
SMC4-215ENST00000484799 LAMC3Q9Y6N6 1575 aa0.72□□□□□ -2.29
SMC4-215ENST00000484799 SPAARA0A1B0GVQ0 90 aa0.72□□□□□ -2.29
SMC4-215ENST00000484799 SIX6O95475 246 aa0.72□□□□□ -2.29
SMC4-215ENST00000484799 APOC2P02655 101 aa0.72□□□□□ -2.29
SMC4-215ENST00000484799 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
SMC4-215ENST00000484799 PP6455Q8WZ26 134 aa0.72□□□□□ -2.29
SMC4-215ENST00000484799 PPP3R2Q96LZ3 170 aa0.72□□□□□ -2.29
SMC4-215ENST00000484799 SIPA1L3O60292 1781 aaPredicted RBP0.72□□□□□ -2.29
SMC4-215ENST00000484799 ARFGEF1Q9Y6D6 1849 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 GVQW2A0A096LPI5 108 aaPredicted RBP0.71□□□□□ -2.3
SMC4-215ENST00000484799 TRAV13-2A0A0B4J235 113 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 CLPSL1A2RUU4 121 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 SMIM6P0DI80 62 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 ACYP2P14621 99 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 Q8N8P6 123 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 LSM10Q969L4 123 aaKnown RBP0.71□□□□□ -2.3
SMC4-215ENST00000484799 Q96NJ1 140 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 AQP10Q96PS8 301 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 SPANXDQ9BXN6 97 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 LINC00312Q9Y6C7 94 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 A2ML1A8K2U0 1454 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 MEGF8Q7Z7M0 2845 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 CASKIN1Q8WXD9 1431 aa0.71□□□□□ -2.3
SMC4-215ENST00000484799 KTN1Q86UP2 1357 aaKnown RBP0.7□□□□□ -2.3
SMC4-215ENST00000484799 A0A1B0GV90 55 aa0.7□□□□□ -2.3
SMC4-215ENST00000484799 VMO1Q7Z5L0 202 aa0.7□□□□□ -2.3
SMC4-215ENST00000484799 TMEM203Q969S6 136 aa0.7□□□□□ -2.3
SMC4-215ENST00000484799 CADP27708 2225 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 LOC100130705A0A1B0GUX0 176 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 TMEM14DPA8MWL7 114 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 MIF4GDA9UHW6 222 aaKnown RBP0.69□□□□□ -2.3
SMC4-215ENST00000484799 HCG22E2RYF7 251 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 TNFP01375 233 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 IFNGP01579 166 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 RBM3P98179 157 aaKnown RBP0.69□□□□□ -2.3
SMC4-215ENST00000484799 Q5VV11 94 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 C8orf59Q8N0T1 100 aaPredicted RBP0.69□□□□□ -2.3
SMC4-215ENST00000484799 WFDC6Q9BQY6 131 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 C2orf88Q9BSF0 95 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 NCOA3Q9Y6Q9 1424 aa0.69□□□□□ -2.3
SMC4-215ENST00000484799 TRGV1A0A0A0MS02 117 aa0.68□□□□□ -2.3
SMC4-215ENST00000484799 INSL4Q14641 139 aa0.68□□□□□ -2.3
SMC4-215ENST00000484799 PATJQ8NI35 1801 aa0.68□□□□□ -2.3
SMC4-215ENST00000484799 QRICH2Q9H0J4 1663 aa0.68□□□□□ -2.3
SMC4-215ENST00000484799 FAM135AQ9P2D6 1515 aa0.68□□□□□ -2.3
SMC4-215ENST00000484799 DOCK11Q5JSL3 2073 aa0.68□□□□□ -2.3
SMC4-215ENST00000484799 BAGE3Q86Y29 109 aa0.67□□□□□ -2.3
SMC4-215ENST00000484799 SCN3BQ9NY72 215 aa0.67□□□□□ -2.3
SMC4-215ENST00000484799 MYH8P13535 1937 aa0.67□□□□□ -2.3
SMC4-215ENST00000484799 CACNA1HO95180 2353 aa0.67□□□□□ -2.3
SMC4-215ENST00000484799 MYOM2P54296 1465 aa0.67□□□□□ -2.3
SMC4-215ENST00000484799 UNC13BO14795 1591 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 PEG3Q9GZU2 1588 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 CUL7Q14999 1698 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 PPIP5K1Q6PFW1 1433 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 SSSCA1O60232 199 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 TPPP2P59282 170 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 MRPS10P82664 201 aaKnown RBP0.66□□□□□ -2.3
SMC4-215ENST00000484799 CATR1Q13166 79 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 Q6ZRX8 168 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 CYP4F30PQ9H0H9 118 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 PROK2Q9HC23 129 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 LENEPQ9Y5L5 61 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
SMC4-215ENST00000484799 SSC5DA1L4H1 1573 aa0.66□□□□□ -2.3
SMC4-215ENST00000484799 PI4KAP42356 2102 aa0.65□□□□□ -2.3
SMC4-215ENST00000484799 CPSF1Q10570 1443 aaKnown RBP0.65□□□□□ -2.3
SMC4-215ENST00000484799 CACNA1EQ15878 2313 aa0.65□□□□□ -2.3
SMC4-215ENST00000484799 ARAP2Q8WZ64 1704 aa0.65□□□□□ -2.31
SMC4-215ENST00000484799 TRAV1-2A0A0B4J238 106 aa0.65□□□□□ -2.31
SMC4-215ENST00000484799 GCHFRP30047 84 aa0.65□□□□□ -2.31
SMC4-215ENST00000484799 GNG4P50150 75 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms