RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 IGLV2-8P01709 118 aa7.46□□□□□ -1.22
SCFD1-206ENST00000484733 SPANXN1Q5VSR9 72 aa7.46□□□□□ -1.22
SCFD1-206ENST00000484733 TMUB2Q71RG4 321 aa7.46□□□□□ -1.22
SCFD1-206ENST00000484733 BCL2L11O43521 198 aa7.45□□□□□ -1.22
SCFD1-206ENST00000484733 CRPP02741 224 aa7.45□□□□□ -1.22
SCFD1-206ENST00000484733 EIF5AP63241 154 aaKnown RBP7.45□□□□□ -1.22
SCFD1-206ENST00000484733 MIAQ16674 131 aa7.45□□□□□ -1.22
SCFD1-206ENST00000484733 MPV17L2Q567V2 206 aa7.45□□□□□ -1.22
SCFD1-206ENST00000484733 CIRBP-AS1Q8TBR5 109 aa7.45□□□□□ -1.22
SCFD1-206ENST00000484733 H2AFB1P0C5Y9 115 aa7.45□□□□□ -1.22
SCFD1-206ENST00000484733 C15orf54Q8N8G6 183 aa7.45□□□□□ -1.22
SCFD1-206ENST00000484733 C11orf52Q96A22 123 aa7.45□□□□□ -1.22
SCFD1-206ENST00000484733 ANGP03950 147 aaKnown RBP7.44□□□□□ -1.22
SCFD1-206ENST00000484733 NTM-AS1Q6ZSK4 140 aa7.44□□□□□ -1.22
SCFD1-206ENST00000484733 PRR34Q9NV39 138 aa7.44□□□□□ -1.22
SCFD1-206ENST00000484733 KANTRA0A1W2PQU2 76 aa7.44□□□□□ -1.22
SCFD1-206ENST00000484733 F5H697 171 aa7.44□□□□□ -1.22
SCFD1-206ENST00000484733 DGAT2L7PQ6IED9 249 aa7.44□□□□□ -1.22
SCFD1-206ENST00000484733 AP1S3Q96PC3 154 aa7.44□□□□□ -1.22
SCFD1-206ENST00000484733 CHCHD5Q9BSY4 110 aa7.44□□□□□ -1.22
SCFD1-206ENST00000484733 MANBALQ9NQG1 85 aa7.44□□□□□ -1.22
SCFD1-206ENST00000484733 TRAV1-1A0A0B4J248 108 aa7.43□□□□□ -1.22
SCFD1-206ENST00000484733 SMIM17P0DL12 118 aa7.43□□□□□ -1.22
SCFD1-206ENST00000484733 RPL35P42766 123 aaKnown RBP7.43□□□□□ -1.22
SCFD1-206ENST00000484733 RPS20P60866 119 aaKnown RBP7.43□□□□□ -1.22
SCFD1-206ENST00000484733 KRTAP26-1Q6PEX3 210 aa7.43□□□□□ -1.22
SCFD1-206ENST00000484733 A0A1B0GV50 99 aa7.43□□□□□ -1.22
SCFD1-206ENST00000484733 USP17L23D6RBM5 183 aa7.43□□□□□ -1.22
SCFD1-206ENST00000484733 OXTP01178 125 aa7.43□□□□□ -1.22
SCFD1-206ENST00000484733 IGLC6P0CF74 106 aa7.43□□□□□ -1.22
SCFD1-206ENST00000484733 IQCJQ1A5X6 159 aa7.43□□□□□ -1.22
SCFD1-206ENST00000484733 SMIM12Q96EX1 92 aa7.43□□□□□ -1.22
SCFD1-206ENST00000484733 TRBV25-1A0A075B6N4 114 aa7.42□□□□□ -1.22
SCFD1-206ENST00000484733 RBX1P62877 108 aa7.42□□□□□ -1.22
SCFD1-206ENST00000484733 CACNG7P62955 275 aa7.42□□□□□ -1.22
SCFD1-206ENST00000484733 DERL1Q9BUN8 251 aa7.42□□□□□ -1.22
SCFD1-206ENST00000484733 PKHD1L1Q86WI1 4243 aa7.42□□□□□ -1.22
SCFD1-206ENST00000484733 MUC21A0A0G2JKD1 596 aa7.41□□□□□ -1.22
SCFD1-206ENST00000484733 MUC21A0A140T8X8 626 aa7.41□□□□□ -1.22
SCFD1-206ENST00000484733 C19orf71A6NCJ1 209 aa7.41□□□□□ -1.22
SCFD1-206ENST00000484733 H7C1H1 209 aa7.41□□□□□ -1.22
SCFD1-206ENST00000484733 M0QY20 66 aa7.41□□□□□ -1.22
SCFD1-206ENST00000484733 PRSS1P07477 247 aa7.41□□□□□ -1.22
SCFD1-206ENST00000484733 RAB5CP51148 216 aa7.41□□□□□ -1.22
SCFD1-206ENST00000484733 CCL20P78556 96 aa7.41□□□□□ -1.22
SCFD1-206ENST00000484733 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
SCFD1-206ENST00000484733 IGHV1-24A0A0C4DH33 117 aa7.4□□□□□ -1.22
SCFD1-206ENST00000484733 FER1L6-AS1Q8NA97 138 aa7.4□□□□□ -1.22
SCFD1-206ENST00000484733 GAGE6Q13070 117 aa7.4□□□□□ -1.23
SCFD1-206ENST00000484733 CLRN3Q8NCR9 226 aa7.4□□□□□ -1.23
SCFD1-206ENST00000484733 DAZAP1Q96EP5 407 aaKnown RBP7.4□□□□□ -1.23
SCFD1-206ENST00000484733 GNG13Q9P2W3 67 aa7.4□□□□□ -1.23
SCFD1-206ENST00000484733 FAT3Q8TDW7 4589 aa7.4□□□□□ -1.23
SCFD1-206ENST00000484733 F2Z2F3 143 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 HLA-DQA1P01909 254 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 CENPWQ5EE01 88 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 LINC00269Q8N2A0 174 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 OR2D3Q8NGH3 330 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 A0A1B0GUV1 79 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 XKRY2A2RUG3 117 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 TEX46H3BTG2 121 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 SERTAD4-AS1Q5TG53 156 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 SUMO4Q6EEV6 95 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 WDR73Q6P4I2 378 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
SCFD1-206ENST00000484733 TRAV8-4A0A0B4J246 113 aa7.38□□□□□ -1.23
SCFD1-206ENST00000484733 P01737 135 aa7.38□□□□□ -1.23
SCFD1-206ENST00000484733 GZMBP10144 247 aa7.38□□□□□ -1.23
SCFD1-206ENST00000484733 SSTP61278 116 aa7.38□□□□□ -1.23
SCFD1-206ENST00000484733 PGLYRP4Q96LB8 373 aa7.38□□□□□ -1.23
SCFD1-206ENST00000484733 PDE6DO43924 150 aa7.38□□□□□ -1.23
SCFD1-206ENST00000484733 MGPP08493 103 aa7.38□□□□□ -1.23
SCFD1-206ENST00000484733 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
SCFD1-206ENST00000484733 REG3AQ06141 175 aa7.38□□□□□ -1.23
SCFD1-206ENST00000484733 EIF5AL1Q6IS14 154 aaKnown RBP7.38□□□□□ -1.23
SCFD1-206ENST00000484733 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
SCFD1-206ENST00000484733 RAB19A4D1S5 217 aa7.37□□□□□ -1.23
SCFD1-206ENST00000484733 TRGC1P0CF51 173 aa7.37□□□□□ -1.23
SCFD1-206ENST00000484733 GNG4P50150 75 aa7.37□□□□□ -1.23
SCFD1-206ENST00000484733 SULT1A2P50226 295 aa7.37□□□□□ -1.23
SCFD1-206ENST00000484733 CNBPP62633 177 aaKnown RBP7.37□□□□□ -1.23
SCFD1-206ENST00000484733 SDIM1Q6ZPB5 146 aa7.37□□□□□ -1.23
SCFD1-206ENST00000484733 C20orf203Q8NBC4 194 aa7.37□□□□□ -1.23
SCFD1-206ENST00000484733 TMEM243Q9BU79 118 aa7.37□□□□□ -1.23
SCFD1-206ENST00000484733 NIT2Q9NQR4 276 aa7.36□□□□□ -1.23
SCFD1-206ENST00000484733 IFNA1P01562 189 aa7.36□□□□□ -1.23
SCFD1-206ENST00000484733 MEF2BQ02080 365 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-206ENST00000484733 CIRBPQ14011 172 aaKnown RBP7.36□□□□□ -1.23
SCFD1-206ENST00000484733 CLPSL2Q6UWE3 100 aa7.36□□□□□ -1.23
SCFD1-206ENST00000484733 TPPP3Q9BW30 176 aa7.36□□□□□ -1.23
SCFD1-206ENST00000484733 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
SCFD1-206ENST00000484733 LRP1Q07954 4544 aaKnown RBP7.36□□□□□ -1.23
SCFD1-206ENST00000484733 NKX2-5P52952 324 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-206ENST00000484733 LYZL1Q6UWQ5 148 aa7.35□□□□□ -1.23
SCFD1-206ENST00000484733 C9orf62Q8N4C0 152 aa7.35□□□□□ -1.23
SCFD1-206ENST00000484733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-206ENST00000484733 NTF3P20783 257 aa7.34□□□□□ -1.23
SCFD1-206ENST00000484733 TAGLN2P37802 199 aaKnown RBP7.34□□□□□ -1.23
SCFD1-206ENST00000484733 CTRLP40313 264 aa7.34□□□□□ -1.23
SCFD1-206ENST00000484733 CNFNQ9BYD5 112 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms