RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 SAA4P35542 130 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 RPL13AP40429 203 aaKnown RBP3.52□□□□□ -1.85
SSBP1-211ENST00000484178 EFNA4P52798 201 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
SSBP1-211ENST00000484178 DLX1P56177 255 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 NDPQ00604 133 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 ATXN8Q156A1 80 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 ZNF876PQ49A33 203 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 MORN3Q6PF18 240 aaPredicted RBP3.52□□□□□ -1.85
SSBP1-211ENST00000484178 CLEC19AQ6UXS0 136 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 TRPT1Q86TN4 253 aaKnown RBP3.52□□□□□ -1.85
SSBP1-211ENST00000484178 NDUFA11Q86Y39 141 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 ZFAND2AQ8N6M9 145 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 C5orf56Q8N8D9 126 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 RASL10AQ92737 203 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 GTSF1LQ9H1H1 148 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 PYGO1Q9Y3Y4 419 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
SSBP1-211ENST00000484178 TECTAO75443 2155 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 KNTC1P50748 2209 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 TRAV25A0A0B4J276 109 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 LOC107984156A0A0G2JMH3 177 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 TRBV30A0A0K0K1B3 111 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 KLLNB2CW77 178 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 H3BT86 120 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 J3QQQ9 107 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 K7ERJ3 54 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 M0R2P5 195 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 TSPAN13O95857 204 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 IGHV3-30P01768 117 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 TRGV3P03979 118 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 SPINK8P0C7L1 97 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 IGHV3-30-5P0DP03 117 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 IFITM1P13164 125 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 KLRB1Q12918 225 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 ECSCRQ19T08 205 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 ZFAND6Q6FIF0 208 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 ZFP2Q6ZN57 461 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 ARL17AQ8IVW1 177 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 TEX29Q8N6K0 151 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 DAZ1Q9NQZ3 744 aaKnown RBP3.51□□□□□ -1.85
SSBP1-211ENST00000484178 ERG28Q9UKR5 140 aa3.51□□□□□ -1.85
SSBP1-211ENST00000484178 DNAH14Q0VDD8 3507 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 TRAV2A0A0B4J234 112 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 CCL21O00585 134 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 CFC1BP0CG36 223 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 CFC1P0CG37 223 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 RNASE4P34096 147 aaKnown RBP3.5□□□□□ -1.85
SSBP1-211ENST00000484178 NBL1P41271 181 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 PSMB2P49721 201 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 SNRPD3P62318 126 aaKnown RBP3.5□□□□□ -1.85
SSBP1-211ENST00000484178 Q6ZUT4 128 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 GPHB5Q86YW7 130 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 RNF182Q8N6D2 247 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 NAA38Q9BRA0 125 aaKnown RBP3.5□□□□□ -1.85
SSBP1-211ENST00000484178 IMUPQ9GZP8 106 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 ZNF256Q9Y2P7 627 aaPredicted RBP3.5□□□□□ -1.85
SSBP1-211ENST00000484178 KIF25-AS1Q9Y6Z4 181 aa3.5□□□□□ -1.85
SSBP1-211ENST00000484178 IGLV4-69A0A075B6H9 119 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 TRBV10-2A0A0K0K1G8 114 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 TMEM223A0PJW6 202 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 LYNX1G3V0Z9 82 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 I3L3M4 83 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 SLC25A20O43772 301 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 SNCGO76070 127 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 IGHG2P01859 326 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 ATP5G1P05496 136 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 MGPP08493 103 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 LYNX1P0DP58 116 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 GATA1P15976 413 aaPredicted RBP3.49□□□□□ -1.85
SSBP1-211ENST00000484178 FXYD7P58549 80 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 CIRBPQ14011 172 aaKnown RBP3.49□□□□□ -1.85
SSBP1-211ENST00000484178 PRR30Q53SZ7 412 aaPredicted RBP3.49□□□□□ -1.85
SSBP1-211ENST00000484178 SH2D6Q7Z4S9 175 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 LINC01561Q8N1V8 128 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 ANKRD29Q8N6D5 301 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 C14orf178Q8N769 122 aaPredicted RBP3.49□□□□□ -1.85
SSBP1-211ENST00000484178 LINC01560Q8TB33 94 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 DNAJC30Q96LL9 226 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 CARD19Q96LW7 228 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 C9orf85Q96MD7 179 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 PRORYQ9H606 182 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 TP53TG1Q9Y2A0 90 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 SZT2Q5T011 3432 aa3.49□□□□□ -1.85
SSBP1-211ENST00000484178 NAV3Q8IVL0 2385 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 TRIOO75962 3097 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 TRAV26-2A0A0B4J265 109 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 A0A1B0GVY2 172 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 IGHV3-23P01764 117 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 RNASE3P12724 160 aaKnown RBP3.48□□□□□ -1.85
SSBP1-211ENST00000484178 LINC00315P59091 139 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 TMEM170BQ5T4T1 132 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 C20orf203Q8NBC4 194 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 LINC00467Q9BRT7 94 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 ANAPC13Q9BS18 74 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 TIMM21Q9BVV7 248 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 S4R3C0 116 aa3.48□□□□□ -1.85
SSBP1-211ENST00000484178 ZDBF2Q9HCK1 2354 aa3.47□□□□□ -1.85
SSBP1-211ENST00000484178 PLCE1Q9P212 2302 aa3.47□□□□□ -1.85
SSBP1-211ENST00000484178 IGHV1OR15-1A0A075B7D0 117 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms