RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 MYH6P13533 1939 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 NUP205Q92621 2012 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 CCDC88CQ9P219 2028 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 ADAMTSL1Q8N6G6 1762 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 RAPGEF6Q8TEU7 1601 aa1.15□□□□□ -2.22
ITGB1-213ENST00000484088 ITSN1Q15811 1721 aa1.15□□□□□ -2.22
ITGB1-213ENST00000484088 CHD2O14647 1828 aaKnown RBP1.15□□□□□ -2.22
ITGB1-213ENST00000484088 SBF2Q86WG5 1849 aa1.15□□□□□ -2.22
ITGB1-213ENST00000484088 FANCMQ8IYD8 2048 aa1.15□□□□□ -2.22
ITGB1-213ENST00000484088 IGLV2-18A0A075B6J9 118 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 IGLV3-9A0A075B6K5 115 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 IGKV1D-17A0A075B6S4 117 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 TMSB15BA0A087X1C1 80 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 TRAV40A0A0B4J280 105 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 IGKV1-6A0A0C4DH72 117 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 TRBV30A0A0K0K1B3 111 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 CXorf51AA0A1B0GTR3 108 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 C19orf71A6NCJ1 209 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 LINC01549A6NIU2 74 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 F8WEM9 126 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 H3BPC8 53 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 CHKB-CPT1BH3BT56 60 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 H7C2G1 150 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 NDUFB1O75438 58 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 PPYP01298 95 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 CRPP02741 224 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 SAA2P0DJI9 122 aaPredicted RBP1.15□□□□□ -2.23
ITGB1-213ENST00000484088 CCL5P13501 91 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 FCER1GP30273 86 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 RPL28P46779 137 aaKnown RBP1.15□□□□□ -2.23
ITGB1-213ENST00000484088 UBE2D1P51668 147 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 C10orf128Q5T292 105 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 FAM74A4Q5TZK3 123 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 LYPD5Q6UWN5 251 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 ZCCHC23Q6ZST2 131 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 CLECL1Q8IZS7 167 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 FAM19A2Q8N3H0 131 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 TMEM105Q8N8V8 129 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 LINC00474Q9P2X8 69 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 MROH2AA6NES4 1674 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 UBR2Q8IWV8 1755 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 BRCA1P38398 1863 aaKnown RBP1.15□□□□□ -2.23
ITGB1-213ENST00000484088 FER1L6Q2WGJ9 1857 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 CCDC88AQ3V6T2 1871 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 DOCK5Q9H7D0 1870 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 NCKAP5O14513 1909 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 ECM29Q5VYK3 1845 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 MON2Q7Z3U7 1717 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 XRN1Q8IZH2 1706 aaKnown RBP1.15□□□□□ -2.23
ITGB1-213ENST00000484088 KDM6BO15054 1643 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 NEXMIFQ5QGS0 1516 aa1.15□□□□□ -2.23
ITGB1-213ENST00000484088 NUP214P35658 2090 aaPredicted RBP1.14□□□□□ -2.23
ITGB1-213ENST00000484088 ANKRD12Q6UB98 2062 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 TMEM131Q92545 1883 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 STRCQ7RTU9 1775 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 PPRC1Q5VV67 1664 aaKnown RBP1.14□□□□□ -2.23
ITGB1-213ENST00000484088 PREX1Q8TCU6 1659 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 IGLV10-54A0A075B6I4 117 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 TRBV6-8A0A0A6YYG3 113 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 TRAV22A0A0B4J277 110 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 TEX49A0A1B0GTD5 131 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 CTXND1A0A1B0GTU2 59 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 SDHAF1A6NFY7 115 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 HIGD1CA8MV81 97 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 D6R8Y8 96 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 E7EUB6 86 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 DNAL4O96015 105 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 IFI6P09912 130 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 PLNP26678 52 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 ELOF1P60002 83 aaKnown RBP1.14□□□□□ -2.23
ITGB1-213ENST00000484088 PRR9Q5T870 116 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 Q6ZS52 159 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 MUSTN1Q8IVN3 82 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 FAM223AQ8IWN6 122 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 Q8N814 137 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 ZNF563Q8TA94 476 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 KLF14Q8TD94 323 aaPredicted RBP1.14□□□□□ -2.23
ITGB1-213ENST00000484088 AMELXQ99217 191 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 WFDC6Q9BQY6 131 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 TMEM14BQ9NUH8 114 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 UBE2D4Q9Y2X8 147 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 ICOSQ9Y6W8 199 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 ZSWIM8A7E2V4 1837 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 IFT172Q9UG01 1749 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 CICQ96RK0 1608 aaPredicted RBP1.14□□□□□ -2.23
ITGB1-213ENST00000484088 SLIT2O94813 1529 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 DYSFO75923 2080 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 SCN9AQ15858 1988 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 ANK1P16157 1881 aa1.14□□□□□ -2.23
ITGB1-213ENST00000484088 CDC42BPGQ6DT37 1551 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 MROH2BQ7Z745 1585 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 GPR179Q6PRD1 2367 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 POLEQ07864 2286 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 PARP14Q460N5 1801 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 HMCN1Q96RW7 5635 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 RGPD1P0DJD0 1748 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 COL24A1Q17RW2 1714 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 A0A087WSZ3 146 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 IGKV2D-26A0A0A0MRZ7 120 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 IGHV3-15A0A0B4J1V0 119 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms