RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
RPP40-206ENST00000483546 MGPP08493 103 aa10.65□□□□□ -0.7
RPP40-206ENST00000483546 WFDC10BQ8IUB3 73 aa10.65□□□□□ -0.7
RPP40-206ENST00000483546 NEXN-AS1Q8NBZ9 246 aa10.65□□□□□ -0.7
RPP40-206ENST00000483546 FRZBQ92765 325 aa10.65□□□□□ -0.7
RPP40-206ENST00000483546 PGLYRP4Q96LB8 373 aa10.65□□□□□ -0.7
RPP40-206ENST00000483546 Q9UF83 564 aa10.65□□□□□ -0.7
RPP40-206ENST00000483546 M0QY20 66 aa10.64□□□□□ -0.71
RPP40-206ENST00000483546 TMEM97Q5BJF2 176 aa10.64□□□□□ -0.71
RPP40-206ENST00000483546 LINC01556Q5JQF7 62 aa10.64□□□□□ -0.71
RPP40-206ENST00000483546 NAT8BQ9UHF3 227 aa10.64□□□□□ -0.71
RPP40-206ENST00000483546 DNAH10Q8IVF4 4471 aa10.63□□□□□ -0.71
RPP40-206ENST00000483546 RTL8CO15255 209 aa10.63□□□□□ -0.71
RPP40-206ENST00000483546 SUMO4Q6EEV6 95 aa10.63□□□□□ -0.71
RPP40-206ENST00000483546 DAZ4Q86SG3 579 aaKnown RBP10.63□□□□□ -0.71
RPP40-206ENST00000483546 KRTAP1-5Q9BYS1 174 aa10.63□□□□□ -0.71
RPP40-206ENST00000483546 DAZ3Q9NR90 486 aaKnown RBP10.63□□□□□ -0.71
RPP40-206ENST00000483546 SMIM27A0A1W2PRY6 76 aa10.62□□□□□ -0.71
RPP40-206ENST00000483546 PPP1R2P9O14990 202 aa10.62□□□□□ -0.71
RPP40-206ENST00000483546 RIGQ13278 110 aa10.62□□□□□ -0.71
RPP40-206ENST00000483546 RASL11AQ6T310 242 aa10.62□□□□□ -0.71
RPP40-206ENST00000483546 TNFRSF18Q9Y5U5 241 aa10.62□□□□□ -0.71
RPP40-206ENST00000483546 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
RPP40-206ENST00000483546 NUP35Q8NFH5 326 aa10.61□□□□□ -0.71
RPP40-206ENST00000483546 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
RPP40-206ENST00000483546 A0A1B0GW15 77 aa10.6□□□□□ -0.71
RPP40-206ENST00000483546 PRSS29PA6NIE9 313 aa10.6□□□□□ -0.71
RPP40-206ENST00000483546 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
RPP40-206ENST00000483546 PKIAP61925 76 aa10.59□□□□□ -0.71
RPP40-206ENST00000483546 ANAPC16Q96DE5 110 aa10.59□□□□□ -0.71
RPP40-206ENST00000483546 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
RPP40-206ENST00000483546 FRAS1Q86XX4 4008 aa10.59□□□□□ -0.71
RPP40-206ENST00000483546 TRBV6-8A0A0A6YYG3 113 aa10.58□□□□□ -0.72
RPP40-206ENST00000483546 MT-ND4LP03901 98 aa10.58□□□□□ -0.72
RPP40-206ENST00000483546 KCNIP4Q6PIL6 250 aa10.58□□□□□ -0.72
RPP40-206ENST00000483546 URGCP-MRPS24S4R325 110 aa10.58□□□□□ -0.72
RPP40-206ENST00000483546 DNAH2Q9P225 4427 aa10.58□□□□□ -0.72
RPP40-206ENST00000483546 TMEM218A2RU14 115 aa10.57□□□□□ -0.72
RPP40-206ENST00000483546 LINC00862A6NCI5 91 aa10.57□□□□□ -0.72
RPP40-206ENST00000483546 S100A8P05109 93 aa10.57□□□□□ -0.72
RPP40-206ENST00000483546 LAGE3Q14657 143 aa10.57□□□□□ -0.72
RPP40-206ENST00000483546 GATD1Q8NB37 220 aa10.57□□□□□ -0.72
RPP40-206ENST00000483546 IBA57-AS1B1ANH7 110 aa10.56□□□□□ -0.72
RPP40-206ENST00000483546 COMMD7Q86VX2 200 aa10.56□□□□□ -0.72
RPP40-206ENST00000483546 NIT1Q86X76 327 aa10.56□□□□□ -0.72
RPP40-206ENST00000483546 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
RPP40-206ENST00000483546 SEC11CQ9BY50 192 aa10.56□□□□□ -0.72
RPP40-206ENST00000483546 DNAH17Q9UFH2 4485 aa10.55□□□□□ -0.72
RPP40-206ENST00000483546 F8W036 122 aa10.55□□□□□ -0.72
RPP40-206ENST00000483546 ELOBQ15370 118 aa10.55□□□□□ -0.72
RPP40-206ENST00000483546 TRBV25-1A0A075B6N4 114 aa10.54□□□□□ -0.72
RPP40-206ENST00000483546 A0A087WX48 190 aa10.54□□□□□ -0.72
RPP40-206ENST00000483546 PPP1R17O96001 155 aa10.54□□□□□ -0.72
RPP40-206ENST00000483546 IGHV3-30P01768 117 aa10.54□□□□□ -0.72
RPP40-206ENST00000483546 IGHV3-33P01772 117 aa10.54□□□□□ -0.72
RPP40-206ENST00000483546 IGHV3-30-3P0DP02 117 aa10.54□□□□□ -0.72
RPP40-206ENST00000483546 IGHV3-30-5P0DP03 117 aa10.54□□□□□ -0.72
RPP40-206ENST00000483546 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
RPP40-206ENST00000483546 Q6ZRN7 208 aaPredicted RBP10.54□□□□□ -0.72
RPP40-206ENST00000483546 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
RPP40-206ENST00000483546 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
RPP40-206ENST00000483546 IGHV1-24A0A0C4DH33 117 aa10.53□□□□□ -0.72
RPP40-206ENST00000483546 TRBV6-5A0A0K0K1A5 114 aa10.53□□□□□ -0.72
RPP40-206ENST00000483546 A0A1B0GVY2 172 aa10.53□□□□□ -0.72
RPP40-206ENST00000483546 ADCYAP1P18509 176 aa10.53□□□□□ -0.72
RPP40-206ENST00000483546 RAB4AP20338 218 aa10.53□□□□□ -0.72
RPP40-206ENST00000483546 HBBP68871 147 aa10.53□□□□□ -0.72
RPP40-206ENST00000483546 RNF185Q96GF1 192 aa10.53□□□□□ -0.72
RPP40-206ENST00000483546 TRAV8-3A0A0A6YYJ7 113 aa10.52□□□□□ -0.73
RPP40-206ENST00000483546 TNP2Q05952 138 aa10.52□□□□□ -0.73
RPP40-206ENST00000483546 NTM-AS1Q6ZSK4 140 aa10.52□□□□□ -0.73
RPP40-206ENST00000483546 AMN1Q8IY45 258 aa10.52□□□□□ -0.73
RPP40-206ENST00000483546 CHCHD5Q9BSY4 110 aa10.52□□□□□ -0.73
RPP40-206ENST00000483546 FAT2Q9NYQ8 4349 aa10.52□□□□□ -0.73
RPP40-206ENST00000483546 A0A1B0GXF2 115 aa10.51□□□□□ -0.73
RPP40-206ENST00000483546 NCR2O95944 276 aa10.51□□□□□ -0.73
RPP40-206ENST00000483546 CAMPP49913 170 aa10.51□□□□□ -0.73
RPP40-206ENST00000483546 COTL1Q14019 142 aa10.51□□□□□ -0.73
RPP40-206ENST00000483546 FAM104BQ5XKR9 115 aa10.51□□□□□ -0.73
RPP40-206ENST00000483546 RPL39LQ96EH5 51 aaKnown RBP10.51□□□□□ -0.73
RPP40-206ENST00000483546 IMMP2LQ96T52 175 aa10.51□□□□□ -0.73
RPP40-206ENST00000483546 CTDSP1Q9GZU7 261 aa10.51□□□□□ -0.73
RPP40-206ENST00000483546 SDHAF1A6NFY7 115 aa10.5□□□□□ -0.73
RPP40-206ENST00000483546 TMEM262E9PQX1 116 aa10.5□□□□□ -0.73
RPP40-206ENST00000483546 ST20Q9HBF5 79 aa10.5□□□□□ -0.73
RPP40-206ENST00000483546 C10orf91Q5T1B1 145 aa10.49□□□□□ -0.73
RPP40-206ENST00000483546 MRPL54Q6P161 138 aaKnown RBP10.49□□□□□ -0.73
RPP40-206ENST00000483546 RMI2Q96E14 147 aa10.49□□□□□ -0.73
RPP40-206ENST00000483546 TMEM243Q9BU79 118 aa10.49□□□□□ -0.73
RPP40-206ENST00000483546 TM2D2Q9BX73 214 aa10.49□□□□□ -0.73
RPP40-206ENST00000483546 COX11Q9Y6N1 276 aa10.49□□□□□ -0.73
RPP40-206ENST00000483546 EPPK1P58107 5090 aaKnown RBP10.49□□□□□ -0.73
RPP40-206ENST00000483546 I3L3M4 83 aa10.48□□□□□ -0.73
RPP40-206ENST00000483546 EREGO14944 169 aa10.48□□□□□ -0.73
RPP40-206ENST00000483546 Q0VG73 95 aa10.48□□□□□ -0.73
RPP40-206ENST00000483546 Q8N3U1 123 aa10.48□□□□□ -0.73
RPP40-206ENST00000483546 BTF3L4Q96K17 158 aa10.48□□□□□ -0.73
RPP40-206ENST00000483546 CARHSP1Q9Y2V2 147 aaKnown RBP10.48□□□□□ -0.73
RPP40-206ENST00000483546 TRAV9-1A0A075B6T8 112 aa10.47□□□□□ -0.73
RPP40-206ENST00000483546 PSCAO43653 123 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms