RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 SAR1AQ9NR31 198 aa-0.47□□□□□ -2.48
PMS1-219ENST00000483293 BATF3Q9NR55 127 aa-0.47□□□□□ -2.48
PMS1-219ENST00000483293 SCP2D1Q9UJQ7 156 aa-0.47□□□□□ -2.48
PMS1-219ENST00000483293 PTPN13Q12923 2485 aa-0.47□□□□□ -2.49
PMS1-219ENST00000483293 SIPA1L3O60292 1781 aaPredicted RBP-0.47□□□□□ -2.49
PMS1-219ENST00000483293 UBE2G1P62253 170 aa-0.48□□□□□ -2.49
PMS1-219ENST00000483293 C9orf116Q5BN46 136 aaPredicted RBP-0.48□□□□□ -2.49
PMS1-219ENST00000483293 IBTKQ9P2D0 1353 aaPredicted RBP-0.48□□□□□ -2.49
PMS1-219ENST00000483293 OVOS2A0A0J9YW53 1432 aa-0.48□□□□□ -2.49
PMS1-219ENST00000483293 OVOS2Q6IE36 1432 aa-0.48□□□□□ -2.49
PMS1-219ENST00000483293 FAM208BQ5VWN6 2430 aa-0.48□□□□□ -2.49
PMS1-219ENST00000483293 TRAV1-2A0A0B4J238 106 aa-0.49□□□□□ -2.49
PMS1-219ENST00000483293 A6NIN4 97 aa-0.49□□□□□ -2.49
PMS1-219ENST00000483293 LINC00694P0DN24 101 aa-0.49□□□□□ -2.49
PMS1-219ENST00000483293 CKS1BP61024 79 aa-0.49□□□□□ -2.49
PMS1-219ENST00000483293 CTAGE3PQ8IX95 158 aa-0.49□□□□□ -2.49
PMS1-219ENST00000483293 PSMG3Q9BT73 122 aaPredicted RBP-0.49□□□□□ -2.49
PMS1-219ENST00000483293 C10orf142B7Z368 130 aa-0.5□□□□□ -2.49
PMS1-219ENST00000483293 AKAP14Q86UN6 197 aa-0.5□□□□□ -2.49
PMS1-219ENST00000483293 CSMD3Q7Z407 3707 aa-0.5□□□□□ -2.49
PMS1-219ENST00000483293 G3V318 75 aa-0.51□□□□□ -2.49
PMS1-219ENST00000483293 S100A7L2Q5SY68 101 aa-0.51□□□□□ -2.49
PMS1-219ENST00000483293 GSKIPQ9P0R6 139 aa-0.51□□□□□ -2.49
PMS1-219ENST00000483293 MUC2Q02817 5179 aa-0.51□□□□□ -2.49
PMS1-219ENST00000483293 MYH8P13535 1937 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 STAB1Q9NY15 2570 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 FAM92AA1XBS5 289 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 IL5P05113 134 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 UBE2D1P51668 147 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 Q6ZUT4 128 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 SPTSSBQ8NFR3 76 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 PYDC1Q8WXC3 89 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 PRO0255Q9UI72 69 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 TENM4Q6N022 2769 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 IFT172Q9UG01 1749 aa-0.52□□□□□ -2.49
PMS1-219ENST00000483293 DISP2A7MBM2 1401 aa-0.53□□□□□ -2.49
PMS1-219ENST00000483293 ARHGEF10O15013 1369 aa-0.53□□□□□ -2.49
PMS1-219ENST00000483293 J3QR89 54 aa-0.53□□□□□ -2.49
PMS1-219ENST00000483293 M0R2Z0 102 aa-0.53□□□□□ -2.49
PMS1-219ENST00000483293 ARPC5O15511 151 aa-0.53□□□□□ -2.49
PMS1-219ENST00000483293 TNXBP22105 4242 aa-0.53□□□□□ -2.49
PMS1-219ENST00000483293 CLPSL1A2RUU4 121 aa-0.54□□□□□ -2.5
PMS1-219ENST00000483293 K7ERU9 68 aa-0.54□□□□□ -2.5
PMS1-219ENST00000483293 PITX3O75364 302 aa-0.54□□□□□ -2.5
PMS1-219ENST00000483293 DR1Q01658 176 aa-0.54□□□□□ -2.5
PMS1-219ENST00000483293 LZICQ8WZA0 190 aa-0.54□□□□□ -2.5
PMS1-219ENST00000483293 WFDC6Q9BQY6 131 aa-0.55□□□□□ -2.5
PMS1-219ENST00000483293 SRRM2Q9UQ35 2752 aaKnown RBP-0.56□□□□□ -2.5
PMS1-219ENST00000483293 LRP2P98164 4655 aa-0.56□□□□□ -2.5
PMS1-219ENST00000483293 IFNA17P01571 189 aa-0.56□□□□□ -2.5
PMS1-219ENST00000483293 ZMYM4Q5VZL5 1548 aa-0.56□□□□□ -2.5
PMS1-219ENST00000483293 PIPP12273 146 aaPredicted RBP-0.57□□□□□ -2.5
PMS1-219ENST00000483293 TSTD1Q8NFU3 115 aa-0.57□□□□□ -2.5
PMS1-219ENST00000483293 CYP4F30PQ9H0H9 118 aa-0.57□□□□□ -2.5
PMS1-219ENST00000483293 SPEF2Q9C093 1822 aa-0.57□□□□□ -2.5
PMS1-219ENST00000483293 ADGRB1O14514 1584 aa-0.57□□□□□ -2.5
PMS1-219ENST00000483293 TRBV10-3A0A0K0K1G6 114 aa-0.58□□□□□ -2.5
PMS1-219ENST00000483293 APOC4-APOC2K7ER74 178 aa-0.58□□□□□ -2.5
PMS1-219ENST00000483293 BIVM-ERCC5R4GMW8 1640 aa-0.58□□□□□ -2.5
PMS1-219ENST00000483293 PRG4Q92954 1404 aaPredicted RBP-0.58□□□□□ -2.5
PMS1-219ENST00000483293 SNCGO76070 127 aa-0.59□□□□□ -2.5
PMS1-219ENST00000483293 RRAS2P62070 204 aaPredicted RBP-0.59□□□□□ -2.5
PMS1-219ENST00000483293 SPTSSAQ969W0 71 aa-0.59□□□□□ -2.5
PMS1-219ENST00000483293 SPTBN1Q01082 2364 aaKnown RBP-0.59□□□□□ -2.5
PMS1-219ENST00000483293 A0A0D9SFI3 127 aa-0.6□□□□□ -2.51
PMS1-219ENST00000483293 M0R3E3 92 aa-0.6□□□□□ -2.51
PMS1-219ENST00000483293 TSPAN19P0C672 248 aa-0.6□□□□□ -2.51
PMS1-219ENST00000483293 SMIM6P0DI80 62 aa-0.6□□□□□ -2.51
PMS1-219ENST00000483293 NPVFQ9HCQ7 196 aa-0.6□□□□□ -2.51
PMS1-219ENST00000483293 KMT2AQ03164 3969 aa-0.6□□□□□ -2.51
PMS1-219ENST00000483293 HSPG2P98160 4391 aa-0.6□□□□□ -2.51
PMS1-219ENST00000483293 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.6□□□□□ -2.51
PMS1-219ENST00000483293 KRTAP19-7Q3SYF9 63 aa-0.61□□□□□ -2.51
PMS1-219ENST00000483293 NEBP20929 6669 aa-0.61□□□□□ -2.51
PMS1-219ENST00000483293 NHSL1Q5SYE7 1610 aa-0.61□□□□□ -2.51
PMS1-219ENST00000483293 TMEM2Q9UHN6 1383 aa-0.61□□□□□ -2.51
PMS1-219ENST00000483293 ZANQ9Y493 2812 aa-0.61□□□□□ -2.51
PMS1-219ENST00000483293 SPINK8P0C7L1 97 aa-0.62□□□□□ -2.51
PMS1-219ENST00000483293 BAGE3Q86Y29 109 aa-0.62□□□□□ -2.51
PMS1-219ENST00000483293 CNFNQ9BYD5 112 aa-0.62□□□□□ -2.51
PMS1-219ENST00000483293 FHAD1B1AJZ9 1412 aa-0.63□□□□□ -2.51
PMS1-219ENST00000483293 DAPK1P53355 1430 aa-0.63□□□□□ -2.51
PMS1-219ENST00000483293 PDZD2O15018 2839 aa-0.63□□□□□ -2.51
PMS1-219ENST00000483293 NWD2Q9ULI1 1742 aa-0.63□□□□□ -2.51
PMS1-219ENST00000483293 NPFFO15130 113 aa-0.63□□□□□ -2.51
PMS1-219ENST00000483293 NCR2O95944 276 aa-0.63□□□□□ -2.51
PMS1-219ENST00000483293 CBLN1P23435 193 aa-0.63□□□□□ -2.51
PMS1-219ENST00000483293 CFAP126Q5VTH2 177 aa-0.63□□□□□ -2.51
PMS1-219ENST00000483293 LINC00312Q9Y6C7 94 aa-0.63□□□□□ -2.51
PMS1-219ENST00000483293 KMT2CQ8NEZ4 4911 aaKnown RBP-0.63□□□□□ -2.51
PMS1-219ENST00000483293 TRAV22A0A0B4J277 110 aa-0.64□□□□□ -2.51
PMS1-219ENST00000483293 DEFB109BQ30KR1 87 aa-0.64□□□□□ -2.51
PMS1-219ENST00000483293 TPT1P8Q9HAU6 139 aa-0.64□□□□□ -2.51
PMS1-219ENST00000483293 WNK3Q9BYP7 1800 aa-0.65□□□□□ -2.51
PMS1-219ENST00000483293 MAP1AP78559 2803 aaPredicted RBP-0.65□□□□□ -2.51
PMS1-219ENST00000483293 ZNF818PQ6ZRF7 136 aa-0.65□□□□□ -2.51
PMS1-219ENST00000483293 SEC11CQ9BY50 192 aa-0.65□□□□□ -2.51
PMS1-219ENST00000483293 SCN3BQ9NY72 215 aa-0.65□□□□□ -2.51
PMS1-219ENST00000483293 MYCBP2O75592 4640 aa-0.65□□□□□ -2.51
PMS1-219ENST00000483293 TENM2Q9NT68 2774 aa-0.66□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms