RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PGLYRP4Q96LB8 373 aa11.31□□□□□ -0.6
HMGN1-214ENST00000482733 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
HMGN1-214ENST00000482733 IGHV3-38A0A0C4DH36 116 aa11.3□□□□□ -0.6
HMGN1-214ENST00000482733 C10orf126Q8N4M7 172 aa11.3□□□□□ -0.6
HMGN1-214ENST00000482733 NEXN-AS1Q8NBZ9 246 aa11.3□□□□□ -0.6
HMGN1-214ENST00000482733 V9GYV3 84 aa11.3□□□□□ -0.6
HMGN1-214ENST00000482733 PRSS29PA6NIE9 313 aa11.29□□□□□ -0.6
HMGN1-214ENST00000482733 HIGD1CA8MV81 97 aa11.29□□□□□ -0.6
HMGN1-214ENST00000482733 LINC01556Q5JQF7 62 aa11.29□□□□□ -0.6
HMGN1-214ENST00000482733 DNAJC30Q96LL9 226 aa11.29□□□□□ -0.6
HMGN1-214ENST00000482733 A0A1B0GUT8 65 aa11.28□□□□□ -0.6
HMGN1-214ENST00000482733 M0QY20 66 aa11.28□□□□□ -0.6
HMGN1-214ENST00000482733 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
HMGN1-214ENST00000482733 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.61
HMGN1-214ENST00000482733 DAZ4Q86SG3 579 aaKnown RBP11.27□□□□□ -0.61
HMGN1-214ENST00000482733 DAZ3Q9NR90 486 aaKnown RBP11.27□□□□□ -0.61
HMGN1-214ENST00000482733 NAT8BQ9UHF3 227 aa11.27□□□□□ -0.61
HMGN1-214ENST00000482733 TNFRSF18Q9Y5U5 241 aa11.27□□□□□ -0.61
HMGN1-214ENST00000482733 BIRC6Q9NR09 4857 aa11.26□□□□□ -0.61
HMGN1-214ENST00000482733 PNRC1Q12796 327 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-214ENST00000482733 RASL11AQ6T310 242 aa11.26□□□□□ -0.61
HMGN1-214ENST00000482733 UQCC3Q6UW78 93 aa11.26□□□□□ -0.61
HMGN1-214ENST00000482733 NFE4Q86UQ8 179 aa11.26□□□□□ -0.61
HMGN1-214ENST00000482733 FRZBQ92765 325 aa11.26□□□□□ -0.61
HMGN1-214ENST00000482733 HECTD4Q9Y4D8 3996 aa11.26□□□□□ -0.61
HMGN1-214ENST00000482733 RIGQ13278 110 aa11.25□□□□□ -0.61
HMGN1-214ENST00000482733 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
HMGN1-214ENST00000482733 SMIM27A0A1W2PRY6 76 aa11.24□□□□□ -0.61
HMGN1-214ENST00000482733 NIT2Q9NQR4 276 aa11.24□□□□□ -0.61
HMGN1-214ENST00000482733 TRBV6-8A0A0A6YYG3 113 aa11.23□□□□□ -0.61
HMGN1-214ENST00000482733 PPP1R2P9O14990 202 aa11.23□□□□□ -0.61
HMGN1-214ENST00000482733 TMEM191AQ9H0A3 160 aa11.23□□□□□ -0.61
HMGN1-214ENST00000482733 IBA57-AS1B1ANH7 110 aa11.22□□□□□ -0.61
HMGN1-214ENST00000482733 IGHV3-30P01768 117 aa11.22□□□□□ -0.61
HMGN1-214ENST00000482733 IGHV3-33P01772 117 aa11.22□□□□□ -0.61
HMGN1-214ENST00000482733 IGHV3-30-3P0DP02 117 aa11.22□□□□□ -0.61
HMGN1-214ENST00000482733 IGHV3-30-5P0DP03 117 aa11.22□□□□□ -0.61
HMGN1-214ENST00000482733 PKIAP61925 76 aa11.22□□□□□ -0.61
HMGN1-214ENST00000482733 KCNIP4Q6PIL6 250 aa11.22□□□□□ -0.61
HMGN1-214ENST00000482733 CHCHD7Q9BUK0 85 aa11.22□□□□□ -0.61
HMGN1-214ENST00000482733 URGCP-MRPS24S4R325 110 aa11.22□□□□□ -0.61
HMGN1-214ENST00000482733 A0A1B0GVY2 172 aa11.21□□□□□ -0.61
HMGN1-214ENST00000482733 TNP2Q05952 138 aa11.21□□□□□ -0.61
HMGN1-214ENST00000482733 NIT1Q86X76 327 aa11.21□□□□□ -0.61
HMGN1-214ENST00000482733 GATD1Q8NB37 220 aa11.21□□□□□ -0.61
HMGN1-214ENST00000482733 PKD1P98161 4303 aa11.2□□□□□ -0.62
HMGN1-214ENST00000482733 A0A1B0GW15 77 aa11.2□□□□□ -0.62
HMGN1-214ENST00000482733 LAGE3Q14657 143 aa11.2□□□□□ -0.62
HMGN1-214ENST00000482733 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-214ENST00000482733 DNAH11Q96DT5 4516 aa11.19□□□□□ -0.62
HMGN1-214ENST00000482733 A0A087WX48 190 aa11.19□□□□□ -0.62
HMGN1-214ENST00000482733 TRAV26-2A0A0B4J265 109 aa11.19□□□□□ -0.62
HMGN1-214ENST00000482733 TMEM218A2RU14 115 aa11.19□□□□□ -0.62
HMGN1-214ENST00000482733 MT-ND4LP03901 98 aa11.19□□□□□ -0.62
HMGN1-214ENST00000482733 ELOBQ15370 118 aa11.19□□□□□ -0.62
HMGN1-214ENST00000482733 ANAPC16Q96DE5 110 aa11.19□□□□□ -0.62
HMGN1-214ENST00000482733 TRBV25-1A0A075B6N4 114 aa11.18□□□□□ -0.62
HMGN1-214ENST00000482733 S100A8P05109 93 aa11.18□□□□□ -0.62
HMGN1-214ENST00000482733 COMMD7Q86VX2 200 aa11.18□□□□□ -0.62
HMGN1-214ENST00000482733 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
HMGN1-214ENST00000482733 IGHV1-24A0A0C4DH33 117 aa11.17□□□□□ -0.62
HMGN1-214ENST00000482733 TMEM262E9PQX1 116 aa11.17□□□□□ -0.62
HMGN1-214ENST00000482733 F8W036 122 aa11.17□□□□□ -0.62
HMGN1-214ENST00000482733 IQCJQ1A5X6 159 aa11.17□□□□□ -0.62
HMGN1-214ENST00000482733 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
HMGN1-214ENST00000482733 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
HMGN1-214ENST00000482733 DYNC1H1Q14204 4646 aaKnown RBP11.16□□□□□ -0.62
HMGN1-214ENST00000482733 TRAV8-3A0A0A6YYJ7 113 aa11.16□□□□□ -0.62
HMGN1-214ENST00000482733 LINC00862A6NCI5 91 aa11.16□□□□□ -0.62
HMGN1-214ENST00000482733 RAB4AP20338 218 aa11.16□□□□□ -0.62
HMGN1-214ENST00000482733 Q8N3U1 123 aa11.16□□□□□ -0.62
HMGN1-214ENST00000482733 RNF185Q96GF1 192 aa11.16□□□□□ -0.62
HMGN1-214ENST00000482733 TRBV6-5A0A0K0K1A5 114 aa11.15□□□□□ -0.62
HMGN1-214ENST00000482733 CAMPP49913 170 aa11.15□□□□□ -0.62
HMGN1-214ENST00000482733 COTL1Q14019 142 aa11.15□□□□□ -0.62
HMGN1-214ENST00000482733 AMN1Q8IY45 258 aa11.15□□□□□ -0.62
HMGN1-214ENST00000482733 RPL39LQ96EH5 51 aaKnown RBP11.15□□□□□ -0.62
HMGN1-214ENST00000482733 TM2D2Q9BX73 214 aa11.15□□□□□ -0.62
HMGN1-214ENST00000482733 SEC11CQ9BY50 192 aa11.15□□□□□ -0.62
HMGN1-214ENST00000482733 EREGO14944 169 aa11.14□□□□□ -0.63
HMGN1-214ENST00000482733 PPP1R17O96001 155 aa11.14□□□□□ -0.63
HMGN1-214ENST00000482733 ADCYAP1P18509 176 aa11.14□□□□□ -0.63
HMGN1-214ENST00000482733 HBBP68871 147 aa11.14□□□□□ -0.63
HMGN1-214ENST00000482733 ATP5L2Q7Z4Y8 100 aa11.14□□□□□ -0.63
HMGN1-214ENST00000482733 Q9HAA7 133 aa11.14□□□□□ -0.63
HMGN1-214ENST00000482733 SDHAF1A6NFY7 115 aa11.13□□□□□ -0.63
HMGN1-214ENST00000482733 PSCAO43653 123 aa11.13□□□□□ -0.63
HMGN1-214ENST00000482733 NCR2O95944 276 aa11.13□□□□□ -0.63
HMGN1-214ENST00000482733 FAM104BQ5XKR9 115 aa11.13□□□□□ -0.63
HMGN1-214ENST00000482733 RMI2Q96E14 147 aa11.13□□□□□ -0.63
HMGN1-214ENST00000482733 TMEM243Q9BU79 118 aa11.13□□□□□ -0.63
HMGN1-214ENST00000482733 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
HMGN1-214ENST00000482733 KLK12Q9UKR0 248 aa11.13□□□□□ -0.63
HMGN1-214ENST00000482733 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
HMGN1-214ENST00000482733 MRPL54Q6P161 138 aaKnown RBP11.12□□□□□ -0.63
HMGN1-214ENST00000482733 COX11Q9Y6N1 276 aa11.12□□□□□ -0.63
HMGN1-214ENST00000482733 PKHD1P08F94 4074 aa11.12□□□□□ -0.63
HMGN1-214ENST00000482733 I3L3M4 83 aa11.11□□□□□ -0.63
HMGN1-214ENST00000482733 AMTP48728 403 aa11.11□□□□□ -0.63
HMGN1-214ENST00000482733 Q0VG73 95 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms