RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 SNAI2O43623 268 aa12.55□□□□□ -0.4
CHPF2-203ENST00000482173 PFDN1O60925 122 aa12.55□□□□□ -0.4
CHPF2-203ENST00000482173 IGLV2-8P01709 118 aa12.55□□□□□ -0.4
CHPF2-203ENST00000482173 OR5AL1P0C617 328 aa12.55□□□□□ -0.4
CHPF2-203ENST00000482173 PKIAP61925 76 aa12.55□□□□□ -0.4
CHPF2-203ENST00000482173 UMAD1C9J7I0 102 aa12.54□□□□□ -0.4
CHPF2-203ENST00000482173 HLA-DQA1P01909 254 aa12.54□□□□□ -0.4
CHPF2-203ENST00000482173 MIAQ16674 131 aa12.54□□□□□ -0.4
CHPF2-203ENST00000482173 TMEM97Q5BJF2 176 aa12.54□□□□□ -0.4
CHPF2-203ENST00000482173 KCNRGQ8N5I3 272 aa12.54□□□□□ -0.4
CHPF2-203ENST00000482173 SMIM17P0DL12 118 aa12.53□□□□□ -0.4
CHPF2-203ENST00000482173 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
CHPF2-203ENST00000482173 TMUB2Q71RG4 321 aa12.53□□□□□ -0.4
CHPF2-203ENST00000482173 PRSS1P07477 247 aa12.52□□□□□ -0.41
CHPF2-203ENST00000482173 GAGE6Q13070 117 aa12.52□□□□□ -0.41
CHPF2-203ENST00000482173 DERL1Q9BUN8 251 aa12.52□□□□□ -0.41
CHPF2-203ENST00000482173 VAX2Q9UIW0 290 aa12.52□□□□□ -0.41
CHPF2-203ENST00000482173 KIF25-AS1Q9Y6Z4 181 aa12.52□□□□□ -0.41
CHPF2-203ENST00000482173 OXTP01178 125 aa12.51□□□□□ -0.41
CHPF2-203ENST00000482173 RBX1P62877 108 aa12.51□□□□□ -0.41
CHPF2-203ENST00000482173 ZNF345Q14585 488 aa12.51□□□□□ -0.41
CHPF2-203ENST00000482173 RGS21Q2M5E4 152 aa12.51□□□□□ -0.41
CHPF2-203ENST00000482173 SERTAD4-AS1Q5TG53 156 aa12.51□□□□□ -0.41
CHPF2-203ENST00000482173 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
CHPF2-203ENST00000482173 CLPSL2Q6UWE3 100 aa12.51□□□□□ -0.41
CHPF2-203ENST00000482173 LRP1Q07954 4544 aaKnown RBP12.5□□□□□ -0.41
CHPF2-203ENST00000482173 H2AFB1P0C5Y9 115 aa12.5□□□□□ -0.41
CHPF2-203ENST00000482173 LINC00269Q8N2A0 174 aa12.5□□□□□ -0.41
CHPF2-203ENST00000482173 AP1S3Q96PC3 154 aa12.5□□□□□ -0.41
CHPF2-203ENST00000482173 PRR34Q9NV39 138 aa12.5□□□□□ -0.41
CHPF2-203ENST00000482173 TRBV25-1A0A075B6N4 114 aa12.49□□□□□ -0.41
CHPF2-203ENST00000482173 RPL35P42766 123 aaKnown RBP12.49□□□□□ -0.41
CHPF2-203ENST00000482173 RPL37AP61513 92 aaKnown RBP12.48□□□□□ -0.41
CHPF2-203ENST00000482173 KRTAP26-1Q6PEX3 210 aa12.48□□□□□ -0.41
CHPF2-203ENST00000482173 C9orf163Q8N9P6 203 aa12.48□□□□□ -0.41
CHPF2-203ENST00000482173 A0A0D9SG52 128 aa12.47□□□□□ -0.41
CHPF2-203ENST00000482173 KANTRA0A1W2PQU2 76 aa12.47□□□□□ -0.41
CHPF2-203ENST00000482173 HMSDA8MTL9 139 aa12.47□□□□□ -0.41
CHPF2-203ENST00000482173 TPPP3Q9BW30 176 aa12.47□□□□□ -0.41
CHPF2-203ENST00000482173 IGHV1-24A0A0C4DH33 117 aa12.46□□□□□ -0.41
CHPF2-203ENST00000482173 BCL2L11O43521 198 aa12.46□□□□□ -0.41
CHPF2-203ENST00000482173 MGPP08493 103 aa12.46□□□□□ -0.41
CHPF2-203ENST00000482173 GZMBP10144 247 aa12.46□□□□□ -0.41
CHPF2-203ENST00000482173 IQCJQ1A5X6 159 aa12.46□□□□□ -0.41
CHPF2-203ENST00000482173 H7C1H1 209 aa12.45□□□□□ -0.42
CHPF2-203ENST00000482173 M0QY20 66 aa12.45□□□□□ -0.42
CHPF2-203ENST00000482173 EIF5AP63241 154 aaKnown RBP12.44□□□□□ -0.42
CHPF2-203ENST00000482173 CCL20P78556 96 aa12.44□□□□□ -0.42
CHPF2-203ENST00000482173 REG3AQ06141 175 aa12.44□□□□□ -0.42
CHPF2-203ENST00000482173 FER1L6-AS1Q8NA97 138 aa12.44□□□□□ -0.42
CHPF2-203ENST00000482173 DAZAP1Q96EP5 407 aaKnown RBP12.44□□□□□ -0.42
CHPF2-203ENST00000482173 GNG13Q9P2W3 67 aa12.44□□□□□ -0.42
CHPF2-203ENST00000482173 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.44□□□□□ -0.42
CHPF2-203ENST00000482173 IGLV10-54A0A075B6I4 117 aa12.43□□□□□ -0.42
CHPF2-203ENST00000482173 IGLC6P0CF74 106 aa12.43□□□□□ -0.42
CHPF2-203ENST00000482173 RPS20P60866 119 aaKnown RBP12.43□□□□□ -0.42
CHPF2-203ENST00000482173 CENPWQ5EE01 88 aa12.43□□□□□ -0.42
CHPF2-203ENST00000482173 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
CHPF2-203ENST00000482173 SDIM1Q6ZPB5 146 aa12.43□□□□□ -0.42
CHPF2-203ENST00000482173 CLRN3Q8NCR9 226 aa12.43□□□□□ -0.42
CHPF2-203ENST00000482173 OR2D3Q8NGH3 330 aa12.43□□□□□ -0.42
CHPF2-203ENST00000482173 C11orf52Q96A22 123 aa12.43□□□□□ -0.42
CHPF2-203ENST00000482173 MANBALQ9NQG1 85 aa12.43□□□□□ -0.42
CHPF2-203ENST00000482173 FAT3Q8TDW7 4589 aa12.42□□□□□ -0.42
CHPF2-203ENST00000482173 PANO1I0J062 215 aa12.42□□□□□ -0.42
CHPF2-203ENST00000482173 HNRNPA3P51991 378 aaKnown RBP12.42□□□□□ -0.42
CHPF2-203ENST00000482173 CACNG7P62955 275 aa12.42□□□□□ -0.42
CHPF2-203ENST00000482173 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
CHPF2-203ENST00000482173 NKX2-5P52952 324 aaPredicted RBP12.41□□□□□ -0.42
CHPF2-203ENST00000482173 TRAV8-4A0A0B4J246 113 aa12.4□□□□□ -0.42
CHPF2-203ENST00000482173 hDV102S1A0JD36 115 aa12.4□□□□□ -0.42
CHPF2-203ENST00000482173 RAB19A4D1S5 217 aa12.4□□□□□ -0.42
CHPF2-203ENST00000482173 C19orf71A6NCJ1 209 aa12.4□□□□□ -0.42
CHPF2-203ENST00000482173 P01737 135 aa12.4□□□□□ -0.42
CHPF2-203ENST00000482173 RASL11AQ6T310 242 aa12.4□□□□□ -0.42
CHPF2-203ENST00000482173 TMEM243Q9BU79 118 aa12.4□□□□□ -0.42
CHPF2-203ENST00000482173 GNG4P50150 75 aa12.39□□□□□ -0.43
CHPF2-203ENST00000482173 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
CHPF2-203ENST00000482173 TRAV1-1A0A0B4J248 108 aa12.38□□□□□ -0.43
CHPF2-203ENST00000482173 A0A1B0GUV1 79 aa12.38□□□□□ -0.43
CHPF2-203ENST00000482173 XKRY2A2RUG3 117 aa12.38□□□□□ -0.43
CHPF2-203ENST00000482173 F2Z2F3 143 aa12.38□□□□□ -0.43
CHPF2-203ENST00000482173 RAB5CP51148 216 aa12.38□□□□□ -0.43
CHPF2-203ENST00000482173 CNBPP62633 177 aaKnown RBP12.38□□□□□ -0.43
CHPF2-203ENST00000482173 PLA2G2DQ9UNK4 145 aa12.38□□□□□ -0.43
CHPF2-203ENST00000482173 IFNA1P01562 189 aa12.37□□□□□ -0.43
CHPF2-203ENST00000482173 TRGC1P0CF51 173 aa12.37□□□□□ -0.43
CHPF2-203ENST00000482173 LYZL1Q6UWQ5 148 aa12.37□□□□□ -0.43
CHPF2-203ENST00000482173 DPH3Q96FX2 82 aa12.37□□□□□ -0.43
CHPF2-203ENST00000482173 GFRA4Q9GZZ7 299 aa12.37□□□□□ -0.43
CHPF2-203ENST00000482173 NIT2Q9NQR4 276 aa12.37□□□□□ -0.43
CHPF2-203ENST00000482173 TEX46H3BTG2 121 aa12.36□□□□□ -0.43
CHPF2-203ENST00000482173 SMIM12Q96EX1 92 aa12.36□□□□□ -0.43
CHPF2-203ENST00000482173 DPH3P1Q9H4G8 78 aa12.36□□□□□ -0.43
CHPF2-203ENST00000482173 AP5S1Q9NUS5 200 aa12.36□□□□□ -0.43
CHPF2-203ENST00000482173 UBE2L6O14933 153 aa12.35□□□□□ -0.43
CHPF2-203ENST00000482173 NTF3P20783 257 aa12.35□□□□□ -0.43
CHPF2-203ENST00000482173 PGLYRP4Q96LB8 373 aa12.35□□□□□ -0.43
CHPF2-203ENST00000482173 PKHD1L1Q86WI1 4243 aa12.35□□□□□ -0.43
CHPF2-203ENST00000482173 IGHV3-64A0A075B6Q5 118 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms