RNA–Protein interactions for RNA: ENST00000481932.1

SH3YL1-223, Transcript of SH3 and SYLF domain containing 1, human

TSL 3

Gene SH3YL1, Length 885 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-223	ENST00000481932	HIST1H2BA	Q96A08	127 aa		5.17	□□□□□ -1.58
SH3YL1-223	ENST00000481932	CHCHD7	Q9BUK0	85 aa		5.17	□□□□□ -1.58
SH3YL1-223	ENST00000481932	MED28	Q9H204	178 aa		5.17	□□□□□ -1.58
SH3YL1-223	ENST00000481932		Q9UF83	564 aa		5.17	□□□□□ -1.58
SH3YL1-223	ENST00000481932	TRBV10-1	A0A0K0K1A3	114 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	KRBOX1	C9JBD0	128 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932		M0R381	172 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	ARMS2	P0C7Q2	107 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	TPT1	P13693	172 aa	Known RBP	5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	UBE2G1	P62253	170 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	LINC01620	Q4KN68	170 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932		Q5BKY6	102 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	AKR1C8P	Q5T2L2	129 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	FAM162B	Q5T6X4	162 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	ZFP82	Q8N141	532 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	DEFB104A	Q8WTQ1	72 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	FMC1	Q96HJ9	113 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	DNAJC30	Q96LL9	226 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	TCEAL7	Q9BRU2	100 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	NKX6-2	Q9C056	277 aa	Predicted RBP	5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	ZFP30	Q9Y2G7	519 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932	PHLDA3	Q9Y5J5	127 aa		5.16	□□□□□ -1.58
SH3YL1-223	ENST00000481932		A0A087WX48	190 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	GRIFIN	A4D1Z8	144 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	MAP1LC3B2	A6NCE7	125 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	RBFOX3	A6NFN3	312 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	CRIP1	P50238	77 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	RPL36A	P83881	106 aa	Known RBP	5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	KCNIP4	Q6PIL6	250 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	ATRAID	Q6UW56	229 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	PET117	Q6UWS5	81 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932		Q8N976	141 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	RPL36AL	Q969Q0	106 aa	Known RBP	5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	UBE2W	Q96B02	151 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	SFRP2	Q96HF1	295 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	MAP1LC3B	Q9GZQ8	125 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	KLK12	Q9UKR0	248 aa		5.15	□□□□□ -1.59
SH3YL1-223	ENST00000481932	TMSB15B	A0A087X1C1	80 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	TRBV6-1	A0A0K0K1D8	114 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	LTA	P01374	205 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	CRP	P02741	224 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	AKR1C3	P42330	323 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	UBE2D3	P61077	147 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	UBE2D2	P62837	147 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	ELOB	Q15370	118 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	ZNF674	Q2M3X9	581 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	CHAC1	Q9BUX1	264 aa		5.14	□□□□□ -1.59
SH3YL1-223	ENST00000481932	TRBV7-3	A0A075B6L6	115 aa		5.13	□□□□□ -1.59
SH3YL1-223	ENST00000481932	CXCL1	P09341	107 aa		5.13	□□□□□ -1.59
SH3YL1-223	ENST00000481932	FHIT	P49789	147 aa		5.13	□□□□□ -1.59
SH3YL1-223	ENST00000481932	KRTAP10-4	P60372	401 aa	Predicted RBP	5.13	□□□□□ -1.59
SH3YL1-223	ENST00000481932		Q0VG73	95 aa		5.13	□□□□□ -1.59
SH3YL1-223	ENST00000481932	ZNF56	Q15929	161 aa		5.13	□□□□□ -1.59
SH3YL1-223	ENST00000481932	C14orf177	Q52M58	125 aa		5.13	□□□□□ -1.59
SH3YL1-223	ENST00000481932	OR10G8	Q8NGN5	311 aa		5.13	□□□□□ -1.59
SH3YL1-223	ENST00000481932	STOML3	Q8TAV4	291 aa		5.13	□□□□□ -1.59
SH3YL1-223	ENST00000481932	TRBV6-8	A0A0A6YYG3	113 aa		5.12	□□□□□ -1.59
SH3YL1-223	ENST00000481932		G3V3Q6	166 aa		5.12	□□□□□ -1.59
SH3YL1-223	ENST00000481932	IGLV2-8	P01709	118 aa		5.12	□□□□□ -1.59
SH3YL1-223	ENST00000481932	RPL19	P84098	196 aa	Known RBP	5.12	□□□□□ -1.59
SH3YL1-223	ENST00000481932	MPV17L2	Q567V2	206 aa		5.12	□□□□□ -1.59
SH3YL1-223	ENST00000481932	NEXN-AS1	Q8NBZ9	246 aa		5.12	□□□□□ -1.59
SH3YL1-223	ENST00000481932	OR10AG1	Q8NH19	301 aa		5.12	□□□□□ -1.59
SH3YL1-223	ENST00000481932	CIRBP-AS1	Q8TBR5	109 aa		5.12	□□□□□ -1.59
SH3YL1-223	ENST00000481932	PKHD1L1	Q86WI1	4243 aa		5.12	□□□□□ -1.59
SH3YL1-223	ENST00000481932	LRP1	Q07954	4544 aa	Known RBP	5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	ARPC5	O15511	151 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	SNAI2	O43623	268 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	HLA-DQA1	P01909	254 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	ANG	P03950	147 aa	Known RBP	5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	RAB4B	P61018	213 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	PKIA	P61925	76 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	PRR27	Q6MZM9	219 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	ENHO	Q6UWT2	76 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	C15orf54	Q8N8G6	183 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	BATF3	Q9NR55	127 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	HMCN2	Q8NDA2	5059 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	FAT3	Q8TDW7	4589 aa		5.11	□□□□□ -1.59
SH3YL1-223	ENST00000481932	PFDN1	O60925	122 aa		5.1	□□□□□ -1.59
SH3YL1-223	ENST00000481932	MIA	Q16674	131 aa		5.1	□□□□□ -1.59
SH3YL1-223	ENST00000481932	AP1S3	Q96PC3	154 aa		5.1	□□□□□ -1.59
SH3YL1-223	ENST00000481932	CHCHD5	Q9BSY4	110 aa		5.1	□□□□□ -1.59
SH3YL1-223	ENST00000481932	ZNF471	Q9BX82	626 aa	Predicted RBP	5.1	□□□□□ -1.59
SH3YL1-223	ENST00000481932	CYTL1	Q9NRR1	136 aa		5.1	□□□□□ -1.59
SH3YL1-223	ENST00000481932	TMEM262	E9PQX1	116 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	OXT	P01178	125 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	S100A9	P06702	114 aa	Known RBP	5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	OR5AL1	P0C617	328 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	RPL37A	P61513	92 aa	Known RBP	5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	ZNF345	Q14585	488 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	TMEM97	Q5BJF2	176 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	SPANXN1	Q5VSR9	72 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	CLPSL2	Q6UWE3	100 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	FAM213B	Q8TBF2	198 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	KRTAP9-8	Q9BYQ0	159 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	VAX2	Q9UIW0	290 aa		5.09	□□□□□ -1.59
SH3YL1-223	ENST00000481932	MUC21	A0A0G2JKD1	596 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms