RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 GAGE12JA6NER3 117 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 CCL18P55774 89 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 TIRAPP58753 221 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 GAGE1Q13065 139 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 GAGE4Q13068 117 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 GAGE5Q13069 117 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 GAGE13Q4V321 117 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 ATRAIDQ6UW56 229 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 LYPD5Q6UWN5 251 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 ATP6V0E2Q8NHE4 81 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 DNAJC30Q96LL9 226 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 NIT2Q9NQR4 276 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 LINC00588Q9Y4M8 146 aa8.54□□□□□ -1.04
SHROOM3-205ENST00000481002 VPS13DQ5THJ4 4388 aa8.53□□□□□ -1.04
SHROOM3-205ENST00000481002 LCE6AA0A183 80 aa8.53□□□□□ -1.04
SHROOM3-205ENST00000481002 UBE2D3P61077 147 aa8.53□□□□□ -1.04
SHROOM3-205ENST00000481002 UBE2D2P62837 147 aa8.53□□□□□ -1.04
SHROOM3-205ENST00000481002 MRAP2Q96G30 205 aa8.53□□□□□ -1.04
SHROOM3-205ENST00000481002 URGCP-MRPS24S4R325 110 aa8.53□□□□□ -1.04
SHROOM3-205ENST00000481002 TRAV26-2A0A0B4J265 109 aa8.52□□□□□ -1.05
SHROOM3-205ENST00000481002 LY6G6CO95867 125 aa8.52□□□□□ -1.05
SHROOM3-205ENST00000481002 GTSF1LQ9H1H1 148 aa8.52□□□□□ -1.05
SHROOM3-205ENST00000481002 MRPS16Q9Y3D3 137 aaKnown RBP8.52□□□□□ -1.05
SHROOM3-205ENST00000481002 TNFRSF18Q9Y5U5 241 aa8.52□□□□□ -1.05
SHROOM3-205ENST00000481002 MRPL51Q4U2R6 128 aaKnown RBP8.51□□□□□ -1.05
SHROOM3-205ENST00000481002 UBE2DNLQ8IWF7 75 aa8.51□□□□□ -1.05
SHROOM3-205ENST00000481002 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
SHROOM3-205ENST00000481002 ALMS1Q8TCU4 4167 aa8.51□□□□□ -1.05
SHROOM3-205ENST00000481002 DNAH1Q9P2D7 4330 aa8.5□□□□□ -1.05
SHROOM3-205ENST00000481002 TRBV6-5A0A0K0K1A5 114 aa8.5□□□□□ -1.05
SHROOM3-205ENST00000481002 GAS8-AS1O95177 125 aa8.5□□□□□ -1.05
SHROOM3-205ENST00000481002 ELOBQ15370 118 aa8.5□□□□□ -1.05
SHROOM3-205ENST00000481002 DAZ4Q86SG3 579 aaKnown RBP8.5□□□□□ -1.05
SHROOM3-205ENST00000481002 RPL39LQ96EH5 51 aaKnown RBP8.5□□□□□ -1.05
SHROOM3-205ENST00000481002 DAZ3Q9NR90 486 aaKnown RBP8.5□□□□□ -1.05
SHROOM3-205ENST00000481002 TRBV24-1A0A075B6N3 115 aa8.49□□□□□ -1.05
SHROOM3-205ENST00000481002 PPP1R17O96001 155 aa8.49□□□□□ -1.05
SHROOM3-205ENST00000481002 COX19Q49B96 90 aa8.49□□□□□ -1.05
SHROOM3-205ENST00000481002 OR10J3Q5JRS4 329 aa8.49□□□□□ -1.05
SHROOM3-205ENST00000481002 LELP1Q5T871 98 aa8.49□□□□□ -1.05
SHROOM3-205ENST00000481002 TMEM136Q6ZRR5 245 aa8.49□□□□□ -1.05
SHROOM3-205ENST00000481002 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.49□□□□□ -1.05
SHROOM3-205ENST00000481002 YPEL4Q96NS1 127 aa8.49□□□□□ -1.05
SHROOM3-205ENST00000481002 SMKR1H3BMG3 65 aa8.48□□□□□ -1.05
SHROOM3-205ENST00000481002 PPBPP02775 128 aa8.48□□□□□ -1.05
SHROOM3-205ENST00000481002 CKS2P33552 79 aa8.48□□□□□ -1.05
SHROOM3-205ENST00000481002 RPS10P46783 165 aaKnown RBP8.48□□□□□ -1.05
SHROOM3-205ENST00000481002 NRACQ8N912 160 aa8.48□□□□□ -1.05
SHROOM3-205ENST00000481002 GNB1LQ9BYB4 327 aa8.48□□□□□ -1.05
SHROOM3-205ENST00000481002 SMCO4Q9NRQ5 59 aa8.48□□□□□ -1.05
SHROOM3-205ENST00000481002 TGIF2-C20orf24A0A0A6YYL0 155 aa8.47□□□□□ -1.05
SHROOM3-205ENST00000481002 IGHV3-38A0A0C4DH36 116 aa8.47□□□□□ -1.05
SHROOM3-205ENST00000481002 NCR2O95944 276 aa8.47□□□□□ -1.05
SHROOM3-205ENST00000481002 HLA-DQA1P01909 254 aa8.47□□□□□ -1.05
SHROOM3-205ENST00000481002 POLR2KP53803 58 aaKnown RBP8.47□□□□□ -1.05
SHROOM3-205ENST00000481002 TMEM97Q5BJF2 176 aa8.47□□□□□ -1.05
SHROOM3-205ENST00000481002 Q9H8V8 135 aa8.47□□□□□ -1.05
SHROOM3-205ENST00000481002 SACSQ9NZJ4 4579 aa8.47□□□□□ -1.05
SHROOM3-205ENST00000481002 TRBV6-8A0A0A6YYG3 113 aa8.46□□□□□ -1.06
SHROOM3-205ENST00000481002 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.06
SHROOM3-205ENST00000481002 D6R8Y8 96 aa8.46□□□□□ -1.06
SHROOM3-205ENST00000481002 PHOX2AO14813 284 aa8.46□□□□□ -1.06
SHROOM3-205ENST00000481002 SIVA1O15304 175 aa8.46□□□□□ -1.06
SHROOM3-205ENST00000481002 NTM-AS1Q6ZSK4 140 aa8.46□□□□□ -1.06
SHROOM3-205ENST00000481002 ORMDL3Q8N138 153 aa8.46□□□□□ -1.06
SHROOM3-205ENST00000481002 TMEM70Q9BUB7 260 aa8.46□□□□□ -1.06
SHROOM3-205ENST00000481002 ST20Q9HBF5 79 aa8.46□□□□□ -1.06
SHROOM3-205ENST00000481002 KMT2CQ8NEZ4 4911 aaKnown RBP8.45□□□□□ -1.06
SHROOM3-205ENST00000481002 TRAV8-6A0A0B4J262 113 aa8.45□□□□□ -1.06
SHROOM3-205ENST00000481002 TNFRSF6BO95407 300 aa8.45□□□□□ -1.06
SHROOM3-205ENST00000481002 MT-ND6P03923 174 aa8.45□□□□□ -1.06
SHROOM3-205ENST00000481002 SUMO2P61956 95 aaKnown RBP8.45□□□□□ -1.06
SHROOM3-205ENST00000481002 WFDC10BQ8IUB3 73 aa8.45□□□□□ -1.06
SHROOM3-205ENST00000481002 CBLN2Q8IUK8 224 aa8.45□□□□□ -1.06
SHROOM3-205ENST00000481002 C20orf78Q9BR46 151 aa8.45□□□□□ -1.06
SHROOM3-205ENST00000481002 TRBV27A0A0K0K1C4 114 aa8.44□□□□□ -1.06
SHROOM3-205ENST00000481002 APCSP02743 223 aa8.44□□□□□ -1.06
SHROOM3-205ENST00000481002 DNAH10OSP0CZ25 163 aa8.44□□□□□ -1.06
SHROOM3-205ENST00000481002 RPL32P62910 135 aaKnown RBP8.44□□□□□ -1.06
SHROOM3-205ENST00000481002 COTL1Q14019 142 aa8.44□□□□□ -1.06
SHROOM3-205ENST00000481002 PRELID3AQ96N28 172 aa8.44□□□□□ -1.06
SHROOM3-205ENST00000481002 LAMTOR2Q9Y2Q5 125 aa8.44□□□□□ -1.06
SHROOM3-205ENST00000481002 KMT2AQ03164 3969 aa8.44□□□□□ -1.06
SHROOM3-205ENST00000481002 PRSS47A8MTI9 375 aa8.43□□□□□ -1.06
SHROOM3-205ENST00000481002 I3L3M4 83 aa8.43□□□□□ -1.06
SHROOM3-205ENST00000481002 VCYO14598 125 aa8.43□□□□□ -1.06
SHROOM3-205ENST00000481002 NPYP01303 97 aa8.43□□□□□ -1.06
SHROOM3-205ENST00000481002 PMCHP20382 165 aa8.43□□□□□ -1.06
SHROOM3-205ENST00000481002 S100A1P23297 94 aa8.43□□□□□ -1.06
SHROOM3-205ENST00000481002 IQCJQ1A5X6 159 aa8.43□□□□□ -1.06
SHROOM3-205ENST00000481002 IGLV2-18A0A075B6J9 118 aa8.42□□□□□ -1.06
SHROOM3-205ENST00000481002 TRBV25-1A0A075B6N4 114 aa8.42□□□□□ -1.06
SHROOM3-205ENST00000481002 IGHV1-24A0A0C4DH33 117 aa8.42□□□□□ -1.06
SHROOM3-205ENST00000481002 NBDYA0A0U1RRE5 68 aa8.42□□□□□ -1.06
SHROOM3-205ENST00000481002 KIAA1644Q3SXP7 199 aa8.42□□□□□ -1.06
SHROOM3-205ENST00000481002 LINC01556Q5JQF7 62 aa8.42□□□□□ -1.06
SHROOM3-205ENST00000481002 Q6ZR54 194 aa8.42□□□□□ -1.06
SHROOM3-205ENST00000481002 NIT1Q86X76 327 aa8.42□□□□□ -1.06
SHROOM3-205ENST00000481002 MRPL18Q9H0U6 180 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms