RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PCLOQ9Y6V0 5065 aa11.34□□□□□ -0.59
HSPG2-209ENST00000480900 TRBV6-8A0A0A6YYG3 113 aa11.33□□□□□ -0.6
HSPG2-209ENST00000480900 A0A1B0GVG6 124 aa11.33□□□□□ -0.6
HSPG2-209ENST00000480900 CTRLP40313 264 aa11.33□□□□□ -0.6
HSPG2-209ENST00000480900 MAPKAPK5-AS1Q8N8E1 139 aa11.33□□□□□ -0.6
HSPG2-209ENST00000480900 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
HSPG2-209ENST00000480900 NTN5Q8WTR8 489 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-209ENST00000480900 APOBP04114 4563 aaKnown RBP11.33□□□□□ -0.6
HSPG2-209ENST00000480900 A0A087WX48 190 aa11.32□□□□□ -0.6
HSPG2-209ENST00000480900 K7EN84 100 aa11.32□□□□□ -0.6
HSPG2-209ENST00000480900 WDR73Q6P4I2 378 aa11.32□□□□□ -0.6
HSPG2-209ENST00000480900 KCNIP4Q6PIL6 250 aa11.32□□□□□ -0.6
HSPG2-209ENST00000480900 LYZL1Q6UWQ5 148 aa11.32□□□□□ -0.6
HSPG2-209ENST00000480900 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
HSPG2-209ENST00000480900 COX11Q9Y6N1 276 aa11.32□□□□□ -0.6
HSPG2-209ENST00000480900 H7C1H1 209 aa11.31□□□□□ -0.6
HSPG2-209ENST00000480900 MGPP08493 103 aa11.31□□□□□ -0.6
HSPG2-209ENST00000480900 TRGC1P0CF51 173 aa11.31□□□□□ -0.6
HSPG2-209ENST00000480900 ELOBQ15370 118 aa11.31□□□□□ -0.6
HSPG2-209ENST00000480900 TMEM97Q5BJF2 176 aa11.31□□□□□ -0.6
HSPG2-209ENST00000480900 RMI2Q96E14 147 aa11.31□□□□□ -0.6
HSPG2-209ENST00000480900 KRTAP4-5Q9BYR2 181 aa11.31□□□□□ -0.6
HSPG2-209ENST00000480900 M0QY20 66 aa11.3□□□□□ -0.6
HSPG2-209ENST00000480900 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
HSPG2-209ENST00000480900 KRTAP10-1P60331 282 aa11.3□□□□□ -0.6
HSPG2-209ENST00000480900 Q8N1X5 172 aa11.3□□□□□ -0.6
HSPG2-209ENST00000480900 Q8N814 137 aa11.3□□□□□ -0.6
HSPG2-209ENST00000480900 DNAJC30Q96LL9 226 aa11.3□□□□□ -0.6
HSPG2-209ENST00000480900 CNFNQ9BYD5 112 aa11.3□□□□□ -0.6
HSPG2-209ENST00000480900 RNASE7Q9H1E1 156 aaKnown RBP11.3□□□□□ -0.6
HSPG2-209ENST00000480900 KLK12Q9UKR0 248 aa11.3□□□□□ -0.6
HSPG2-209ENST00000480900 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
HSPG2-209ENST00000480900 NTF3P20783 257 aa11.29□□□□□ -0.6
HSPG2-209ENST00000480900 GCSHP23434 173 aa11.29□□□□□ -0.6
HSPG2-209ENST00000480900 PKIAP61925 76 aa11.29□□□□□ -0.6
HSPG2-209ENST00000480900 SUMO4Q6EEV6 95 aa11.29□□□□□ -0.6
HSPG2-209ENST00000480900 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
HSPG2-209ENST00000480900 TMEM262E9PQX1 116 aa11.27□□□□□ -0.61
HSPG2-209ENST00000480900 ATRAIDQ6UW56 229 aa11.27□□□□□ -0.61
HSPG2-209ENST00000480900 NTM-AS1Q6ZSK4 140 aa11.27□□□□□ -0.61
HSPG2-209ENST00000480900 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.61
HSPG2-209ENST00000480900 UBE2WQ96B02 151 aa11.27□□□□□ -0.61
HSPG2-209ENST00000480900 FAM210AQ96ND0 272 aa11.27□□□□□ -0.61
HSPG2-209ENST00000480900 CHCHD5Q9BSY4 110 aa11.27□□□□□ -0.61
HSPG2-209ENST00000480900 EIF5A2Q9GZV4 153 aaKnown RBP11.27□□□□□ -0.61
HSPG2-209ENST00000480900 CEBPGP53567 150 aa11.26□□□□□ -0.61
HSPG2-209ENST00000480900 Q0VG73 95 aa11.26□□□□□ -0.61
HSPG2-209ENST00000480900 WFDC2Q14508 124 aa11.26□□□□□ -0.61
HSPG2-209ENST00000480900 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
HSPG2-209ENST00000480900 RASL11AQ6T310 242 aa11.26□□□□□ -0.61
HSPG2-209ENST00000480900 TRBV25-1A0A075B6N4 114 aa11.25□□□□□ -0.61
HSPG2-209ENST00000480900 IGKV2D-24A0A075B6R9 120 aa11.25□□□□□ -0.61
HSPG2-209ENST00000480900 GATCO43716 136 aaKnown RBP11.25□□□□□ -0.61
HSPG2-209ENST00000480900 TWIST1Q15672 202 aa11.25□□□□□ -0.61
HSPG2-209ENST00000480900 GTSF1Q8WW33 167 aa11.25□□□□□ -0.61
HSPG2-209ENST00000480900 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
HSPG2-209ENST00000480900 A8MWL6 223 aa11.24□□□□□ -0.61
HSPG2-209ENST00000480900 XGP55808 180 aa11.24□□□□□ -0.61
HSPG2-209ENST00000480900 IQCJQ1A5X6 159 aa11.24□□□□□ -0.61
HSPG2-209ENST00000480900 CT83Q5H943 113 aa11.24□□□□□ -0.61
HSPG2-209ENST00000480900 C15orf54Q8N8G6 183 aa11.24□□□□□ -0.61
HSPG2-209ENST00000480900 NIT2Q9NQR4 276 aa11.24□□□□□ -0.61
HSPG2-209ENST00000480900 IGHV1-24A0A0C4DH33 117 aa11.23□□□□□ -0.61
HSPG2-209ENST00000480900 LECT2O14960 151 aa11.23□□□□□ -0.61
HSPG2-209ENST00000480900 CRPP02741 224 aa11.23□□□□□ -0.61
HSPG2-209ENST00000480900 ANGP03950 147 aaKnown RBP11.23□□□□□ -0.61
HSPG2-209ENST00000480900 BAALCQ8WXS3 180 aa11.23□□□□□ -0.61
HSPG2-209ENST00000480900 ZNF727A8MUV8 499 aa11.22□□□□□ -0.61
HSPG2-209ENST00000480900 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
HSPG2-209ENST00000480900 ENHOQ6UWT2 76 aa11.22□□□□□ -0.61
HSPG2-209ENST00000480900 LINC01551Q86U37 167 aa11.22□□□□□ -0.61
HSPG2-209ENST00000480900 ABCA13Q86UQ4 5058 aa11.22□□□□□ -0.61
HSPG2-209ENST00000480900 FRZBQ92765 325 aa11.22□□□□□ -0.61
HSPG2-209ENST00000480900 PGLYRP4Q96LB8 373 aa11.22□□□□□ -0.61
HSPG2-209ENST00000480900 TMEM70Q9BUB7 260 aa11.22□□□□□ -0.61
HSPG2-209ENST00000480900 C1orf43Q9BWL3 253 aa11.22□□□□□ -0.61
HSPG2-209ENST00000480900 RBX1P62877 108 aa11.21□□□□□ -0.61
HSPG2-209ENST00000480900 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.61
HSPG2-209ENST00000480900 Q8N976 141 aa11.21□□□□□ -0.61
HSPG2-209ENST00000480900 FOXA3P55318 350 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-209ENST00000480900 GAGE6Q13070 117 aa11.2□□□□□ -0.62
HSPG2-209ENST00000480900 MIAQ16674 131 aa11.2□□□□□ -0.62
HSPG2-209ENST00000480900 PRR34Q9NV39 138 aa11.2□□□□□ -0.62
HSPG2-209ENST00000480900 GATD1Q8NB37 220 aa11.19□□□□□ -0.62
HSPG2-209ENST00000480900 TSKUQ8WUA8 353 aa11.19□□□□□ -0.62
HSPG2-209ENST00000480900 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
HSPG2-209ENST00000480900 OSTCQ9NRP0 149 aa11.19□□□□□ -0.62
HSPG2-209ENST00000480900 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-209ENST00000480900 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
HSPG2-209ENST00000480900 FAM231BA6NCW3 169 aa11.18□□□□□ -0.62
HSPG2-209ENST00000480900 TEX261Q6UWH6 196 aa11.18□□□□□ -0.62
HSPG2-209ENST00000480900 BORCS7Q96B45 105 aa11.18□□□□□ -0.62
HSPG2-209ENST00000480900 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
HSPG2-209ENST00000480900 EPM2AB3EWF7 344 aa11.17□□□□□ -0.62
HSPG2-209ENST00000480900 COTL1Q14019 142 aa11.17□□□□□ -0.62
HSPG2-209ENST00000480900 FAM74A3Q4VXF1 159 aa11.17□□□□□ -0.62
HSPG2-209ENST00000480900 A0A1B0GUV1 79 aa11.16□□□□□ -0.62
HSPG2-209ENST00000480900 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
HSPG2-209ENST00000480900 C14orf177Q52M58 125 aa11.16□□□□□ -0.62
HSPG2-209ENST00000480900 LINC00269Q8N2A0 174 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms