RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TIMM17AQ99595 171 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 H3BT86 120 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 CTRLP40313 264 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 C4orf3Q8WVX3 66 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 COL5A1P20908 1838 aaPredicted RBP7.43□□□□□ -1.22
VEGFA-212ENST00000480614 TRBV6-1A0A0K0K1D8 114 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 DEFB112Q30KQ8 113 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 Q8N1Y9 231 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 TRBV12-3P01733 135 aa7.43□□□□□ -1.22
VEGFA-212ENST00000480614 F8W735 103 aaPredicted RBP7.42□□□□□ -1.22
VEGFA-212ENST00000480614 PCP2Q8IVA1 136 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 G3V4G9 280 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 K7EIM0 57 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 MYCNOSP40205 109 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 INSL3P51460 131 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 C16orf54Q6UWD8 224 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 SLURP1P55000 103 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 IGHV1-58A0A0C4DH39 117 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 IGHV7-81A0A0B4J1V7 117 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 COL4A6Q14031 1691 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 IGLV11-55A0A075B6I3 123 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 ATP5EP2Q5VTU8 51 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 A4D1N5 150 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 C2orf70A6NJV1 201 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 RPL39LQ96EH5 51 aaKnown RBP7.42□□□□□ -1.22
VEGFA-212ENST00000480614 DEFB136Q30KP8 78 aa7.42□□□□□ -1.22
VEGFA-212ENST00000480614 RNASE8Q8TDE3 154 aaKnown RBP7.42□□□□□ -1.22
VEGFA-212ENST00000480614 TMEM61Q8N0U2 210 aa7.41□□□□□ -1.22
VEGFA-212ENST00000480614 K7ERS5 55 aa7.41□□□□□ -1.22
VEGFA-212ENST00000480614 C14orf132Q9NPU4 83 aa7.41□□□□□ -1.22
VEGFA-212ENST00000480614 FGF23Q9GZV9 251 aaPredicted RBP7.41□□□□□ -1.22
VEGFA-212ENST00000480614 IGHV4-4A0A075B6R2 117 aa7.41□□□□□ -1.22
VEGFA-212ENST00000480614 MUSTN1Q8IVN3 82 aa7.41□□□□□ -1.22
VEGFA-212ENST00000480614 TOMM6Q96B49 74 aa7.41□□□□□ -1.22
VEGFA-212ENST00000480614 COX7BP24311 80 aa7.41□□□□□ -1.22
VEGFA-212ENST00000480614 WIPF3A6NGB9 483 aa7.4□□□□□ -1.22
VEGFA-212ENST00000480614 I3L2K1 104 aa7.4□□□□□ -1.22
VEGFA-212ENST00000480614 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
VEGFA-212ENST00000480614 SPAG11BQ08648 103 aa7.4□□□□□ -1.22
VEGFA-212ENST00000480614 SEM1Q6ZVN7 128 aa7.4□□□□□ -1.22
VEGFA-212ENST00000480614 TMEM263Q8WUH6 116 aaKnown RBP7.4□□□□□ -1.22
VEGFA-212ENST00000480614 LGALS9O00182 355 aa7.4□□□□□ -1.22
VEGFA-212ENST00000480614 IGHV4-28A0A0C4DH34 117 aa7.4□□□□□ -1.22
VEGFA-212ENST00000480614 TAX1BP3O14907 124 aa7.4□□□□□ -1.22
VEGFA-212ENST00000480614 IGKV1-17P01599 117 aa7.4□□□□□ -1.23
VEGFA-212ENST00000480614 IGHV3-30P01768 117 aa7.4□□□□□ -1.23
VEGFA-212ENST00000480614 IGHV3-33P01772 117 aa7.4□□□□□ -1.23
VEGFA-212ENST00000480614 IGHV3-30-3P0DP02 117 aa7.4□□□□□ -1.23
VEGFA-212ENST00000480614 IGHV3-30-5P0DP03 117 aa7.4□□□□□ -1.23
VEGFA-212ENST00000480614 UFSP1Q6NVU6 142 aa7.4□□□□□ -1.23
VEGFA-212ENST00000480614 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.23
VEGFA-212ENST00000480614 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.23
VEGFA-212ENST00000480614 C5orf56Q8N8D9 126 aa7.39□□□□□ -1.23
VEGFA-212ENST00000480614 FLNBO75369 2602 aaKnown RBP7.39□□□□□ -1.23
VEGFA-212ENST00000480614 IGLV10-54A0A075B6I4 117 aa7.39□□□□□ -1.23
VEGFA-212ENST00000480614 C11orf86A6NJI1 115 aa7.38□□□□□ -1.23
VEGFA-212ENST00000480614 CTSGP08311 255 aa7.38□□□□□ -1.23
VEGFA-212ENST00000480614 IGKV3D-7A0A0C4DH55 119 aa7.38□□□□□ -1.23
VEGFA-212ENST00000480614 TRBV10-2A0A0K0K1G8 114 aa7.38□□□□□ -1.23
VEGFA-212ENST00000480614 KRTAP27-1Q3LI81 207 aa7.38□□□□□ -1.23
VEGFA-212ENST00000480614 SMAD5-AS1Q9Y6J3 95 aa7.38□□□□□ -1.23
VEGFA-212ENST00000480614 H0Y9J4 135 aa7.37□□□□□ -1.23
VEGFA-212ENST00000480614 E9PLD3 99 aa7.37□□□□□ -1.23
VEGFA-212ENST00000480614 RSPO1Q2MKA7 263 aaPredicted RBP7.37□□□□□ -1.23
VEGFA-212ENST00000480614 APRG1Q8IVJ8 170 aa7.37□□□□□ -1.23
VEGFA-212ENST00000480614 C11orf53Q8IXP5 236 aa7.37□□□□□ -1.23
VEGFA-212ENST00000480614 ODF3Q96PU9 254 aa7.37□□□□□ -1.23
VEGFA-212ENST00000480614 DAZAP2Q15038 168 aaPredicted RBP7.37□□□□□ -1.23
VEGFA-212ENST00000480614 RS1O15537 224 aa7.37□□□□□ -1.23
VEGFA-212ENST00000480614 C17orf77Q96MU5 243 aa7.37□□□□□ -1.23
VEGFA-212ENST00000480614 IGKV4-1P06312 121 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 H7C423 109 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 FANCD2OSQ96PS1 177 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 PRR15LQ9BU68 103 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 IGLV2-23P01705 113 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 FOXI1Q12951 378 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 UPK3BQ9BT76 320 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 BPTFQ12830 3046 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 LECT2O14960 151 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 AJUBAQ96IF1 538 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 SMIM9A6NGZ8 99 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 IGHV4-38-2P0DP08 117 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 CTSZQ9UBR2 303 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 ATP5EP56381 51 aaPredicted RBP7.36□□□□□ -1.23
VEGFA-212ENST00000480614 DIAPH2-AS1Q14236 149 aa7.36□□□□□ -1.23
VEGFA-212ENST00000480614 A0A0J9YXV3 536 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 ZNF503-AS2A6NEH8 195 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 BPY2O14599 106 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 CDPF1Q6NVV7 123 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 IGHV4-61A0A0C4DH41 118 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 IGFL2Q6UWQ7 119 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 CRYGBP07316 175 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 MIAQ16674 131 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 C10orf105Q8TEF2 133 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 AKAP13Q12802 2813 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 IGHV4-30-2A0A087WSY4 118 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 NCR3O14931 201 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 IGHV4OR15-8A0A075B7B6 117 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 A0A087WW49 117 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 CASC2Q6XLA1 102 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms