RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 GAGE4Q13068 117 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 GAGE5Q13069 117 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 ELOBQ15370 118 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 GAGE13Q4V321 117 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 NEGR1Q7Z3B1 354 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 CBLN2Q8IUK8 224 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 GATD1Q8NB37 220 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 ZNRF2Q8NHG8 242 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 RPL36ALQ969Q0 106 aaKnown RBP7.79□□□□□ -1.16
CLDN11-205ENST00000480067 MRAP2Q96G30 205 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 RNF185Q96GF1 192 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 TNFRSF18Q9Y5U5 241 aa7.79□□□□□ -1.16
CLDN11-205ENST00000480067 TRBV7-3A0A075B6L6 115 aa7.78□□□□□ -1.16
CLDN11-205ENST00000480067 TGIF2-C20orf24A0A0A6YYL0 155 aa7.78□□□□□ -1.16
CLDN11-205ENST00000480067 CKS2P33552 79 aa7.78□□□□□ -1.16
CLDN11-205ENST00000480067 NIT2Q9NQR4 276 aa7.78□□□□□ -1.16
CLDN11-205ENST00000480067 TRBV24-1A0A075B6N3 115 aa7.77□□□□□ -1.17
CLDN11-205ENST00000480067 COX19Q49B96 90 aa7.77□□□□□ -1.17
CLDN11-205ENST00000480067 MRPL51Q4U2R6 128 aaKnown RBP7.77□□□□□ -1.17
CLDN11-205ENST00000480067 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.77□□□□□ -1.17
CLDN11-205ENST00000480067 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
CLDN11-205ENST00000480067 ATP6V0E2Q8NHE4 81 aa7.77□□□□□ -1.17
CLDN11-205ENST00000480067 DNAJC30Q96LL9 226 aa7.77□□□□□ -1.17
CLDN11-205ENST00000480067 GNB1LQ9BYB4 327 aa7.77□□□□□ -1.17
CLDN11-205ENST00000480067 PPP1R17O96001 155 aa7.76□□□□□ -1.17
CLDN11-205ENST00000480067 CCL18P55774 89 aa7.76□□□□□ -1.17
CLDN11-205ENST00000480067 TMEM136Q6ZRR5 245 aa7.76□□□□□ -1.17
CLDN11-205ENST00000480067 SMKR1H3BMG3 65 aa7.76□□□□□ -1.17
CLDN11-205ENST00000480067 HLA-DQA1P01909 254 aa7.76□□□□□ -1.17
CLDN11-205ENST00000480067 APCSP02743 223 aa7.76□□□□□ -1.17
CLDN11-205ENST00000480067 PPBPP02775 128 aa7.76□□□□□ -1.17
CLDN11-205ENST00000480067 OR10J3Q5JRS4 329 aa7.76□□□□□ -1.17
CLDN11-205ENST00000480067 RPL39LQ96EH5 51 aaKnown RBP7.76□□□□□ -1.17
CLDN11-205ENST00000480067 LYSTQ99698 3801 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 D6R8Y8 96 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 GAS8-AS1O95177 125 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 NCR2O95944 276 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 MT-ND6P03923 174 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 UBE2D3P61077 147 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 UBE2D2P62837 147 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 ESRGQ1W209 222 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 LYPD5Q6UWN5 251 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 DAZ4Q86SG3 579 aaKnown RBP7.75□□□□□ -1.17
CLDN11-205ENST00000480067 ORMDL3Q8N138 153 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 YPEL4Q96NS1 127 aa7.75□□□□□ -1.17
CLDN11-205ENST00000480067 DAZ3Q9NR90 486 aaKnown RBP7.75□□□□□ -1.17
CLDN11-205ENST00000480067 SCO1O75880 301 aa7.74□□□□□ -1.17
CLDN11-205ENST00000480067 LINC00694P0DN24 101 aa7.74□□□□□ -1.17
CLDN11-205ENST00000480067 RPS10P46783 165 aaKnown RBP7.74□□□□□ -1.17
CLDN11-205ENST00000480067 UBE2DNLQ8IWF7 75 aa7.74□□□□□ -1.17
CLDN11-205ENST00000480067 GTSF1LQ9H1H1 148 aa7.74□□□□□ -1.17
CLDN11-205ENST00000480067 ST20Q9HBF5 79 aa7.74□□□□□ -1.17
CLDN11-205ENST00000480067 IGHV3-38A0A0C4DH36 116 aa7.73□□□□□ -1.17
CLDN11-205ENST00000480067 FABP9Q0Z7S8 132 aa7.73□□□□□ -1.17
CLDN11-205ENST00000480067 MRPL18Q9H0U6 180 aaKnown RBP7.73□□□□□ -1.17
CLDN11-205ENST00000480067 TRAPPC1Q9Y5R8 145 aa7.73□□□□□ -1.17
CLDN11-205ENST00000480067 TRBV6-5A0A0K0K1A5 114 aa7.72□□□□□ -1.17
CLDN11-205ENST00000480067 SDHAF1A6NFY7 115 aa7.72□□□□□ -1.17
CLDN11-205ENST00000480067 TNFRSF6BO95407 300 aa7.72□□□□□ -1.17
CLDN11-205ENST00000480067 KIAA1644Q3SXP7 199 aa7.72□□□□□ -1.17
CLDN11-205ENST00000480067 LGALS9CQ6DKI2 356 aa7.72□□□□□ -1.17
CLDN11-205ENST00000480067 NRACQ8N912 160 aa7.72□□□□□ -1.17
CLDN11-205ENST00000480067 PRELID3AQ96N28 172 aa7.72□□□□□ -1.17
CLDN11-205ENST00000480067 LINC00588Q9Y4M8 146 aa7.72□□□□□ -1.17
CLDN11-205ENST00000480067 LY6G6CO95867 125 aa7.71□□□□□ -1.17
CLDN11-205ENST00000480067 TIRAPP58753 221 aa7.71□□□□□ -1.17
CLDN11-205ENST00000480067 SUMO2P61956 95 aaKnown RBP7.71□□□□□ -1.17
CLDN11-205ENST00000480067 C20orf78Q9BR46 151 aa7.71□□□□□ -1.17
CLDN11-205ENST00000480067 VCYO14598 125 aa7.71□□□□□ -1.18
CLDN11-205ENST00000480067 PHOX2AO14813 284 aa7.71□□□□□ -1.18
CLDN11-205ENST00000480067 NPYP01303 97 aa7.71□□□□□ -1.18
CLDN11-205ENST00000480067 PMCHP20382 165 aa7.71□□□□□ -1.18
CLDN11-205ENST00000480067 TMEM97Q5BJF2 176 aa7.71□□□□□ -1.18
CLDN11-205ENST00000480067 TMEM70Q9BUB7 260 aa7.71□□□□□ -1.18
CLDN11-205ENST00000480067 LAMTOR2Q9Y2Q5 125 aa7.71□□□□□ -1.18
CLDN11-205ENST00000480067 TRAV8-6A0A0B4J262 113 aa7.7□□□□□ -1.18
CLDN11-205ENST00000480067 COLCA2A8K830 154 aa7.7□□□□□ -1.18
CLDN11-205ENST00000480067 I3L3M4 83 aa7.7□□□□□ -1.18
CLDN11-205ENST00000480067 POLR2KP53803 58 aaKnown RBP7.7□□□□□ -1.18
CLDN11-205ENST00000480067 COTL1Q14019 142 aa7.7□□□□□ -1.18
CLDN11-205ENST00000480067 LELP1Q5T871 98 aa7.7□□□□□ -1.18
CLDN11-205ENST00000480067 DEFB104AQ8WTQ1 72 aa7.7□□□□□ -1.18
CLDN11-205ENST00000480067 LINC00476Q8WZB0 136 aa7.7□□□□□ -1.18
CLDN11-205ENST00000480067 MRPS16Q9Y3D3 137 aaKnown RBP7.7□□□□□ -1.18
CLDN11-205ENST00000480067 TRBV6-8A0A0A6YYG3 113 aa7.69□□□□□ -1.18
CLDN11-205ENST00000480067 TRBV27A0A0K0K1C4 114 aa7.69□□□□□ -1.18
CLDN11-205ENST00000480067 RAB5AP20339 215 aa7.69□□□□□ -1.18
CLDN11-205ENST00000480067 KIR2DL4Q99706 377 aa7.69□□□□□ -1.18
CLDN11-205ENST00000480067 LOC389332A0A1B0GUA5 103 aa7.68□□□□□ -1.18
CLDN11-205ENST00000480067 ALKBH7Q9BT30 221 aaPredicted RBP7.68□□□□□ -1.18
CLDN11-205ENST00000480067 UPK3BQ9BT76 320 aa7.68□□□□□ -1.18
CLDN11-205ENST00000480067 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
CLDN11-205ENST00000480067 Q9H8V8 135 aa7.68□□□□□ -1.18
CLDN11-205ENST00000480067 VPS13DQ5THJ4 4388 aa7.68□□□□□ -1.18
CLDN11-205ENST00000480067 TRBV25-1A0A075B6N4 114 aa7.67□□□□□ -1.18
CLDN11-205ENST00000480067 IGHV1-24A0A0C4DH33 117 aa7.67□□□□□ -1.18
CLDN11-205ENST00000480067 FCER1GP30273 86 aa7.67□□□□□ -1.18
CLDN11-205ENST00000480067 RPL32P62910 135 aaKnown RBP7.67□□□□□ -1.18
CLDN11-205ENST00000480067 NTM-AS1Q6ZSK4 140 aa7.67□□□□□ -1.18
CLDN11-205ENST00000480067 DNAH1Q9P2D7 4330 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms