RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 KCNIP4Q6PIL6 250 aa8.64□□□□□ -1.03
ABCF1-206ENST00000479542 C9orf62Q8N4C0 152 aa8.64□□□□□ -1.03
ABCF1-206ENST00000479542 RPL36ALQ969Q0 106 aaKnown RBP8.64□□□□□ -1.03
ABCF1-206ENST00000479542 UBE2WQ96B02 151 aa8.64□□□□□ -1.03
ABCF1-206ENST00000479542 DERL1Q9BUN8 251 aa8.64□□□□□ -1.03
ABCF1-206ENST00000479542 PHLDA3Q9Y5J5 127 aa8.64□□□□□ -1.03
ABCF1-206ENST00000479542 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
ABCF1-206ENST00000479542 PKIAP61925 76 aa8.63□□□□□ -1.03
ABCF1-206ENST00000479542 RPL19P84098 196 aaKnown RBP8.63□□□□□ -1.03
ABCF1-206ENST00000479542 TRBV6-8A0A0A6YYG3 113 aa8.62□□□□□ -1.03
ABCF1-206ENST00000479542 M0R381 172 aa8.62□□□□□ -1.03
ABCF1-206ENST00000479542 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
ABCF1-206ENST00000479542 PRR27Q6MZM9 219 aa8.62□□□□□ -1.03
ABCF1-206ENST00000479542 DNAJC30Q96LL9 226 aa8.62□□□□□ -1.03
ABCF1-206ENST00000479542 C1orf43Q9BWL3 253 aa8.62□□□□□ -1.03
ABCF1-206ENST00000479542 PLA2G2DQ9UNK4 145 aa8.62□□□□□ -1.03
ABCF1-206ENST00000479542 A0A087WWL8 130 aa8.61□□□□□ -1.03
ABCF1-206ENST00000479542 CXCL1P09341 107 aa8.61□□□□□ -1.03
ABCF1-206ENST00000479542 MEF2BQ02080 365 aaPredicted RBP8.61□□□□□ -1.03
ABCF1-206ENST00000479542 FAM74A4Q5TZK3 123 aa8.61□□□□□ -1.03
ABCF1-206ENST00000479542 ENHOQ6UWT2 76 aa8.61□□□□□ -1.03
ABCF1-206ENST00000479542 ZFP82Q8N141 532 aa8.61□□□□□ -1.03
ABCF1-206ENST00000479542 RAB19A4D1S5 217 aa8.6□□□□□ -1.03
ABCF1-206ENST00000479542 IFNA1P01562 189 aa8.6□□□□□ -1.03
ABCF1-206ENST00000479542 RAB4BP61018 213 aa8.6□□□□□ -1.03
ABCF1-206ENST00000479542 MIAQ16674 131 aa8.6□□□□□ -1.03
ABCF1-206ENST00000479542 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
ABCF1-206ENST00000479542 CENPWQ5EE01 88 aa8.6□□□□□ -1.03
ABCF1-206ENST00000479542 C9orf163Q8N9P6 203 aa8.6□□□□□ -1.03
ABCF1-206ENST00000479542 OR10AG1Q8NH19 301 aa8.6□□□□□ -1.03
ABCF1-206ENST00000479542 PDE6DO43924 150 aa8.59□□□□□ -1.03
ABCF1-206ENST00000479542 BCL2P10415 239 aa8.59□□□□□ -1.03
ABCF1-206ENST00000479542 RPL37AP61513 92 aaKnown RBP8.59□□□□□ -1.03
ABCF1-206ENST00000479542 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.59□□□□□ -1.03
ABCF1-206ENST00000479542 SSBP4Q9BWG4 385 aaPredicted RBP8.59□□□□□ -1.03
ABCF1-206ENST00000479542 PRR34Q9NV39 138 aa8.59□□□□□ -1.03
ABCF1-206ENST00000479542 VAX2Q9UIW0 290 aa8.59□□□□□ -1.03
ABCF1-206ENST00000479542 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.03
ABCF1-206ENST00000479542 A0A1B0GVG6 124 aa8.58□□□□□ -1.04
ABCF1-206ENST00000479542 SNAI2O43623 268 aa8.58□□□□□ -1.04
ABCF1-206ENST00000479542 OR5AL1P0C617 328 aa8.58□□□□□ -1.04
ABCF1-206ENST00000479542 Q6ZRU5 148 aa8.58□□□□□ -1.04
ABCF1-206ENST00000479542 MED9Q9NWA0 146 aa8.58□□□□□ -1.04
ABCF1-206ENST00000479542 UBR4Q5T4S7 5183 aa8.58□□□□□ -1.04
ABCF1-206ENST00000479542 TRBV20OR9-2A0A075B6H5 130 aa8.57□□□□□ -1.04
ABCF1-206ENST00000479542 MUC21A0A0G2JKD1 596 aa8.57□□□□□ -1.04
ABCF1-206ENST00000479542 MUC21A0A140T8X8 626 aa8.57□□□□□ -1.04
ABCF1-206ENST00000479542 TMEM262E9PQX1 116 aa8.57□□□□□ -1.04
ABCF1-206ENST00000479542 CRPP02741 224 aa8.57□□□□□ -1.04
ABCF1-206ENST00000479542 GNG4P50150 75 aa8.57□□□□□ -1.04
ABCF1-206ENST00000479542 ALKAL2Q6UX46 152 aa8.57□□□□□ -1.04
ABCF1-206ENST00000479542 CLRN3Q8NCR9 226 aa8.57□□□□□ -1.04
ABCF1-206ENST00000479542 DAZAP1Q96EP5 407 aaKnown RBP8.57□□□□□ -1.04
ABCF1-206ENST00000479542 SMIM12Q96EX1 92 aa8.57□□□□□ -1.04
ABCF1-206ENST00000479542 C19orf71A6NCJ1 209 aa8.56□□□□□ -1.04
ABCF1-206ENST00000479542 USP17L23D6RBM5 183 aa8.56□□□□□ -1.04
ABCF1-206ENST00000479542 TAGLN2P37802 199 aaKnown RBP8.56□□□□□ -1.04
ABCF1-206ENST00000479542 CIRBPQ14011 172 aaKnown RBP8.56□□□□□ -1.04
ABCF1-206ENST00000479542 SPANXN1Q5VSR9 72 aa8.56□□□□□ -1.04
ABCF1-206ENST00000479542 SDIM1Q6ZPB5 146 aa8.56□□□□□ -1.04
ABCF1-206ENST00000479542 NEXN-AS1Q8NBZ9 246 aa8.56□□□□□ -1.04
ABCF1-206ENST00000479542 PRSS1P07477 247 aa8.55□□□□□ -1.04
ABCF1-206ENST00000479542 GZMBP10144 247 aa8.55□□□□□ -1.04
ABCF1-206ENST00000479542 NKX2-5P52952 324 aaPredicted RBP8.55□□□□□ -1.04
ABCF1-206ENST00000479542 SSTP61278 116 aa8.55□□□□□ -1.04
ABCF1-206ENST00000479542 BLOC1S1P78537 153 aa8.55□□□□□ -1.04
ABCF1-206ENST00000479542 MPV17L2Q567V2 206 aa8.55□□□□□ -1.04
ABCF1-206ENST00000479542 KRTAP26-1Q6PEX3 210 aa8.55□□□□□ -1.04
ABCF1-206ENST00000479542 C15orf54Q8N8G6 183 aa8.55□□□□□ -1.04
ABCF1-206ENST00000479542 OR2D3Q8NGH3 330 aa8.55□□□□□ -1.04
ABCF1-206ENST00000479542 ANGP03950 147 aaKnown RBP8.54□□□□□ -1.04
ABCF1-206ENST00000479542 IGLC6P0CF74 106 aa8.54□□□□□ -1.04
ABCF1-206ENST00000479542 RPS20P60866 119 aaKnown RBP8.54□□□□□ -1.04
ABCF1-206ENST00000479542 ZNF56Q15929 161 aa8.54□□□□□ -1.04
ABCF1-206ENST00000479542 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
ABCF1-206ENST00000479542 P01737 135 aa8.53□□□□□ -1.04
ABCF1-206ENST00000479542 MT1HL1P0DM35 61 aa8.53□□□□□ -1.04
ABCF1-206ENST00000479542 HNRNPA3P51991 378 aaKnown RBP8.53□□□□□ -1.04
ABCF1-206ENST00000479542 CNBPP62633 177 aaKnown RBP8.53□□□□□ -1.04
ABCF1-206ENST00000479542 FER1L6-AS1Q8NA97 138 aa8.53□□□□□ -1.04
ABCF1-206ENST00000479542 LYPD6BQ8NI32 183 aa8.53□□□□□ -1.04
ABCF1-206ENST00000479542 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
ABCF1-206ENST00000479542 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
ABCF1-206ENST00000479542 BIN3Q9NQY0 253 aa8.53□□□□□ -1.04
ABCF1-206ENST00000479542 KIF25-AS1Q9Y6Z4 181 aa8.53□□□□□ -1.04
ABCF1-206ENST00000479542 IQCJQ1A5X6 159 aa8.52□□□□□ -1.05
ABCF1-206ENST00000479542 NTM-AS1Q6ZSK4 140 aa8.52□□□□□ -1.05
ABCF1-206ENST00000479542 TRAV8-4A0A0B4J246 113 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 A0A1B0GUV1 79 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 XKRY2A2RUG3 117 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 F5H697 171 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 K7EN84 100 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 RBX1P62877 108 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 NUDT10Q8NFP7 164 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 OCC1Q8TAD7 63 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 NUDT11Q96G61 164 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
ABCF1-206ENST00000479542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
ABCF1-206ENST00000479542 TRBV25-1A0A075B6N4 114 aa8.5□□□□□ -1.05
ABCF1-206ENST00000479542 F2Z2F3 143 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms