RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
ECHDC1-216ENST00000479525 OR10G8Q8NGN5 311 aa11.39□□□□□ -0.59
ECHDC1-216ENST00000479525 RMI2Q96E14 147 aa11.39□□□□□ -0.59
ECHDC1-216ENST00000479525 CHCHD5Q9BSY4 110 aa11.39□□□□□ -0.59
ECHDC1-216ENST00000479525 IGLV2-8P01709 118 aa11.38□□□□□ -0.59
ECHDC1-216ENST00000479525 ANGP03950 147 aaKnown RBP11.38□□□□□ -0.59
ECHDC1-216ENST00000479525 GAGE6Q13070 117 aa11.38□□□□□ -0.59
ECHDC1-216ENST00000479525 SSBP4Q9BWG4 385 aaPredicted RBP11.38□□□□□ -0.59
ECHDC1-216ENST00000479525 DMBT1Q9UGM3 2413 aaPredicted RBP11.37□□□□□ -0.59
ECHDC1-216ENST00000479525 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
ECHDC1-216ENST00000479525 CXCL1P09341 107 aa11.37□□□□□ -0.59
ECHDC1-216ENST00000479525 OR5AL1P0C617 328 aa11.37□□□□□ -0.59
ECHDC1-216ENST00000479525 Q6ZSA8 131 aa11.37□□□□□ -0.59
ECHDC1-216ENST00000479525 SCXQ7RTU7 201 aa11.37□□□□□ -0.59
ECHDC1-216ENST00000479525 KIF25-AS1Q9Y6Z4 181 aa11.37□□□□□ -0.59
ECHDC1-216ENST00000479525 ATRAIDQ6UW56 229 aa11.36□□□□□ -0.59
ECHDC1-216ENST00000479525 OR2D3Q8NGH3 330 aa11.36□□□□□ -0.59
ECHDC1-216ENST00000479525 C11orf52Q96A22 123 aa11.36□□□□□ -0.59
ECHDC1-216ENST00000479525 MANBALQ9NQG1 85 aa11.36□□□□□ -0.59
ECHDC1-216ENST00000479525 CRPP02741 224 aa11.35□□□□□ -0.59
ECHDC1-216ENST00000479525 SMIM17P0DL12 118 aa11.35□□□□□ -0.59
ECHDC1-216ENST00000479525 EIF5AP63241 154 aaKnown RBP11.35□□□□□ -0.59
ECHDC1-216ENST00000479525 C1orf43Q9BWL3 253 aa11.35□□□□□ -0.59
ECHDC1-216ENST00000479525 COX11Q9Y6N1 276 aa11.35□□□□□ -0.59
ECHDC1-216ENST00000479525 FER1L6-AS1Q8NA97 138 aa11.34□□□□□ -0.59
ECHDC1-216ENST00000479525 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
ECHDC1-216ENST00000479525 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
ECHDC1-216ENST00000479525 IGLC6P0CF74 106 aa11.33□□□□□ -0.6
ECHDC1-216ENST00000479525 ELOBQ15370 118 aa11.33□□□□□ -0.6
ECHDC1-216ENST00000479525 SUMO4Q6EEV6 95 aa11.33□□□□□ -0.6
ECHDC1-216ENST00000479525 CHCHD7Q9BUK0 85 aa11.33□□□□□ -0.6
ECHDC1-216ENST00000479525 DAZAP1Q96EP5 407 aaKnown RBP11.32□□□□□ -0.6
ECHDC1-216ENST00000479525 C19orf71A6NCJ1 209 aa11.31□□□□□ -0.6
ECHDC1-216ENST00000479525 GNG4P50150 75 aa11.31□□□□□ -0.6
ECHDC1-216ENST00000479525 SULT1A2P50226 295 aa11.31□□□□□ -0.6
ECHDC1-216ENST00000479525 NKX2-5P52952 324 aaPredicted RBP11.31□□□□□ -0.6
ECHDC1-216ENST00000479525 RBX1P62877 108 aa11.31□□□□□ -0.6
ECHDC1-216ENST00000479525 Q0VG73 95 aa11.31□□□□□ -0.6
ECHDC1-216ENST00000479525 MED9Q9NWA0 146 aa11.31□□□□□ -0.6
ECHDC1-216ENST00000479525 IGLV10-54A0A075B6I4 117 aa11.3□□□□□ -0.6
ECHDC1-216ENST00000479525 USP17L23D6RBM5 183 aa11.3□□□□□ -0.6
ECHDC1-216ENST00000479525 LYZL1Q6UWQ5 148 aa11.3□□□□□ -0.6
ECHDC1-216ENST00000479525 LINC00269Q8N2A0 174 aa11.3□□□□□ -0.6
ECHDC1-216ENST00000479525 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
ECHDC1-216ENST00000479525 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
ECHDC1-216ENST00000479525 M0QY20 66 aa11.29□□□□□ -0.6
ECHDC1-216ENST00000479525 MEF2BQ02080 365 aaPredicted RBP11.29□□□□□ -0.6
ECHDC1-216ENST00000479525 VAX2Q9UIW0 290 aa11.29□□□□□ -0.6
ECHDC1-216ENST00000479525 LRP1Q07954 4544 aaKnown RBP11.29□□□□□ -0.6
ECHDC1-216ENST00000479525 P01737 135 aa11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 TRBV25-1A0A075B6N4 114 aa11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 J3QL48 77 aa11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 PLA2G1BP04054 148 aaKnown RBP11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 PRSS1P07477 247 aa11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 BCL2P10415 239 aa11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 RAB5CP51148 216 aa11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 CHAC1Q9BUX1 264 aa11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 GFRA4Q9GZZ7 299 aa11.28□□□□□ -0.6
ECHDC1-216ENST00000479525 NTF3P20783 257 aa11.27□□□□□ -0.61
ECHDC1-216ENST00000479525 RPS20P60866 119 aaKnown RBP11.27□□□□□ -0.61
ECHDC1-216ENST00000479525 KRTAP26-1Q6PEX3 210 aa11.27□□□□□ -0.61
ECHDC1-216ENST00000479525 NUDT10Q8NFP7 164 aa11.27□□□□□ -0.61
ECHDC1-216ENST00000479525 NUDT11Q96G61 164 aa11.27□□□□□ -0.61
ECHDC1-216ENST00000479525 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.61
ECHDC1-216ENST00000479525 hCG_2014768A0A024R1R8 64 aa11.26□□□□□ -0.61
ECHDC1-216ENST00000479525 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
ECHDC1-216ENST00000479525 TRAV26-2A0A0B4J265 109 aa11.26□□□□□ -0.61
ECHDC1-216ENST00000479525 IGHV1-24A0A0C4DH33 117 aa11.26□□□□□ -0.61
ECHDC1-216ENST00000479525 TEX46H3BTG2 121 aa11.26□□□□□ -0.61
ECHDC1-216ENST00000479525 IFNA1P01562 189 aa11.26□□□□□ -0.61
ECHDC1-216ENST00000479525 PKHD1L1Q86WI1 4243 aa11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 FAT3Q8TDW7 4589 aa11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 K7EN84 100 aa11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 PDE6DO43924 150 aa11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 KRTAP10-4P60372 401 aaPredicted RBP11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 CACNG7P62955 275 aa11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 MIAQ16674 131 aa11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 IQCJQ1A5X6 159 aa11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 EIF5AL1Q6IS14 154 aaKnown RBP11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 TCTE3Q8IZS6 198 aa11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 C20orf203Q8NBC4 194 aa11.25□□□□□ -0.61
ECHDC1-216ENST00000479525 PANO1I0J062 215 aa11.24□□□□□ -0.61
ECHDC1-216ENST00000479525 FOXA3P55318 350 aaPredicted RBP11.24□□□□□ -0.61
ECHDC1-216ENST00000479525 RASL11AQ6T310 242 aa11.24□□□□□ -0.61
ECHDC1-216ENST00000479525 PRR34Q9NV39 138 aa11.24□□□□□ -0.61
ECHDC1-216ENST00000479525 REG3AQ06141 175 aa11.23□□□□□ -0.61
ECHDC1-216ENST00000479525 C14orf177Q52M58 125 aa11.23□□□□□ -0.61
ECHDC1-216ENST00000479525 TMEM97Q5BJF2 176 aa11.23□□□□□ -0.61
ECHDC1-216ENST00000479525 SLC51BQ86UW2 128 aa11.23□□□□□ -0.61
ECHDC1-216ENST00000479525 DPH3P1Q9H4G8 78 aa11.23□□□□□ -0.61
ECHDC1-216ENST00000479525 IGKV3OR2-268A0A0C4DH90 116 aa11.22□□□□□ -0.61
ECHDC1-216ENST00000479525 H7C1H1 209 aa11.22□□□□□ -0.61
ECHDC1-216ENST00000479525 TRGC1P0CF51 173 aa11.22□□□□□ -0.61
ECHDC1-216ENST00000479525 TWIST1Q15672 202 aa11.22□□□□□ -0.61
ECHDC1-216ENST00000479525 OCC1Q8TAD7 63 aa11.22□□□□□ -0.61
ECHDC1-216ENST00000479525 TMEM243Q9BU79 118 aa11.22□□□□□ -0.61
ECHDC1-216ENST00000479525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.22□□□□□ -0.61
ECHDC1-216ENST00000479525 XKRY2A2RUG3 117 aa11.21□□□□□ -0.61
ECHDC1-216ENST00000479525 CEBPGP53567 150 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms