RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 CBLN4Q9NTU7 201 aa0.22□□□□□ -2.37
CCDC58-204ENST00000479414 MPC1Q9Y5U8 109 aa0.22□□□□□ -2.37
CCDC58-204ENST00000479414 TARBP1Q13395 1621 aaKnown RBP0.22□□□□□ -2.37
CCDC58-204ENST00000479414 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
CCDC58-204ENST00000479414 PEG3Q9GZU2 1588 aa0.22□□□□□ -2.37
CCDC58-204ENST00000479414 MAP3K1Q13233 1512 aa0.22□□□□□ -2.37
CCDC58-204ENST00000479414 SCN11AQ9UI33 1791 aa0.22□□□□□ -2.37
CCDC58-204ENST00000479414 LRRC37A2A6NM11 1700 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 SUPT6HQ7KZ85 1726 aaKnown RBP0.21□□□□□ -2.38
CCDC58-204ENST00000479414 ANKRD26Q9UPS8 1709 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 PTPRQQ9UMZ3 2332 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 FAT1Q14517 4588 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 EIF4G3O43432 1585 aaKnown RBP0.21□□□□□ -2.38
CCDC58-204ENST00000479414 ABCA8O94911 1581 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 LOC107984640A0A0U1RRK4 108 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 ARL5CA6NH57 179 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 M0QZK8 103 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 EVI2AP22794 236 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 CRYGSP22914 178 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 BLCAPP62952 87 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 C5orf56Q8N8D9 126 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 OR51A4Q8NGJ6 313 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 MRPL36Q9P0J6 103 aaKnown RBP0.21□□□□□ -2.38
CCDC58-204ENST00000479414 APOBP04114 4563 aaKnown RBP0.21□□□□□ -2.38
CCDC58-204ENST00000479414 KDM5DQ9BY66 1539 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 POLR1AO95602 1720 aaPredicted RBP0.21□□□□□ -2.38
CCDC58-204ENST00000479414 DISP2A7MBM2 1401 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 C10orf71Q711Q0 1435 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 C3P01024 1663 aa0.21□□□□□ -2.38
CCDC58-204ENST00000479414 NBASA2RRP1 2371 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 TSC2P49815 1807 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 SSC5DA1L4H1 1573 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 GLI2P10070 1586 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 MAST1Q9Y2H9 1570 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 TRBV7-6A0A0J9YX20 115 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 MCRIP1C9JLW8 97 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 IGKCP01834 107 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 APOC1P02654 83 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 FABP1P07148 127 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 SDC4P31431 198 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 LELP1Q5T871 98 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 LXNQ9BS40 222 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 VPS13BQ7Z7G8 4022 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 FMN2Q9NZ56 1722 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 DNAH5Q8TE73 4624 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 CUL7Q14999 1698 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 PBRM1Q86U86 1689 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 DNAH3Q8TD57 4116 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 PAPPAQ13219 1627 aa0.2□□□□□ -2.38
CCDC58-204ENST00000479414 MAP2P11137 1827 aaKnown RBP0.2□□□□□ -2.38
CCDC58-204ENST00000479414 KIAA0100Q14667 2235 aaKnown RBP0.19□□□□□ -2.38
CCDC58-204ENST00000479414 ADAMTS12P58397 1594 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 LTN1O94822 1766 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 ITSN1Q15811 1721 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 MYH1P12882 1939 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 ABCA4P78363 2273 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 WDR7Q9Y4E6 1490 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 LOC107986453A0A1B0GWG9 222 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 IDO2Q6ZQW0 420 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 VPS25Q9BRG1 176 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 SMPXQ9UHP9 88 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 ATPIF1Q9UII2 106 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 CADP27708 2225 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 SHROOM2Q13796 1616 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 DNMBPQ6XZF7 1577 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 DNAH10Q8IVF4 4471 aa0.19□□□□□ -2.38
CCDC58-204ENST00000479414 ZNF831Q5JPB2 1677 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 A2MP01023 1474 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 TNXBP22105 4242 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 ABCA6Q8N139 1617 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.18□□□□□ -2.38
CCDC58-204ENST00000479414 EDF1O60869 148 aaKnown RBP0.18□□□□□ -2.38
CCDC58-204ENST00000479414 IFITM1P13164 125 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 DNAJB13P59910 316 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 RPL37P61927 97 aaKnown RBP0.18□□□□□ -2.38
CCDC58-204ENST00000479414 ESPL1Q14674 2120 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 Q5BKY6 102 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 BRK1Q8WUW1 75 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 MRPL35Q9NZE8 188 aaKnown RBP0.18□□□□□ -2.38
CCDC58-204ENST00000479414 DNAH17Q9UFH2 4485 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 ABCA1O95477 2261 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 EEA1Q15075 1411 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 DNAH2Q9P225 4427 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 A0A0G2JMZ2 1700 aa0.18□□□□□ -2.38
CCDC58-204ENST00000479414 AFDNP55196 1824 aaKnown RBP0.17□□□□□ -2.38
CCDC58-204ENST00000479414 CFTRP13569 1480 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 TEX14Q8IWB6 1497 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 RGPD3A6NKT7 1758 aaPredicted RBP0.17□□□□□ -2.38
CCDC58-204ENST00000479414 RGPD4Q7Z3J3 1758 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 LPAP08519 4548 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 E7EQ34 232 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 FXYD1O00168 92 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 ABCC5O15440 1437 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 IGF2P01344 180 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 GTF2A1P52655 376 aaPredicted RBP0.17□□□□□ -2.38
CCDC58-204ENST00000479414 LYPD5Q6UWN5 251 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 COA4Q9NYJ1 87 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 PKDREJQ9NTG1 2253 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 MUC17Q685J3 4493 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms