RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 Q6ZUT4 128 aa-0.18□□□□□ -2.44
SPC25-204ENST00000479309 SSBP3-AS1Q7Z2R9 100 aa-0.18□□□□□ -2.44
SPC25-204ENST00000479309 PSMG3Q9BT73 122 aaPredicted RBP-0.18□□□□□ -2.44
SPC25-204ENST00000479309 CNFNQ9BYD5 112 aa-0.18□□□□□ -2.44
SPC25-204ENST00000479309 CYP4F30PQ9H0H9 118 aa-0.18□□□□□ -2.44
SPC25-204ENST00000479309 NHSL1Q5SYE7 1610 aa-0.18□□□□□ -2.44
SPC25-204ENST00000479309 MACF1Q9UPN3 7388 aaKnown RBP-0.18□□□□□ -2.44
SPC25-204ENST00000479309 CADP27708 2225 aa-0.18□□□□□ -2.44
SPC25-204ENST00000479309 ABCA2Q9BZC7 2435 aa-0.18□□□□□ -2.44
SPC25-204ENST00000479309 ARFGEF1Q9Y6D6 1849 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 A0A0D9SFI3 127 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 TRBV10-3A0A0K0K1G6 114 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 APOC4-APOC2K7ER74 178 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 M0R129 80 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 M0R2Z0 102 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 PIN1P1O15428 100 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 SPINK8P0C7L1 97 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 SMIM6P0DI80 62 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 PIPP12273 146 aaPredicted RBP-0.19□□□□□ -2.44
SPC25-204ENST00000479309 CKS1BP61024 79 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 Q5VV11 94 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 WFDC6Q9BQY6 131 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 SMIM3Q9BZL3 60 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 PRO0255Q9UI72 69 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 IFT172Q9UG01 1749 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 ARHGEF10O15013 1369 aa-0.19□□□□□ -2.44
SPC25-204ENST00000479309 FHAD1B1AJZ9 1412 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 CDK5RAP2Q96SN8 1893 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 MYH13Q9UKX3 1938 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 CLPSL1A2RUU4 121 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 G3V318 75 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 IL5P05113 134 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 RRAS2P62070 204 aaPredicted RBP-0.2□□□□□ -2.44
SPC25-204ENST00000479309 UBE2G1P62253 170 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 SCIMPQ6UWF3 145 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 LZICQ8WZA0 190 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 WNK2Q9Y3S1 2297 aa-0.2□□□□□ -2.44
SPC25-204ENST00000479309 ZNF292O60281 2723 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 CEP152O94986 1710 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 AHCTF1Q8WYP5 2266 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 PXDNQ92626 1479 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 ZMYM4Q5VZL5 1548 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 M0R3E3 92 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 PITX3O75364 302 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 LINC00694P0DN24 101 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 CBLN1P23435 193 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 ZNF818PQ6ZRF7 136 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 SPTSSAQ969W0 71 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 NWD2Q9ULI1 1742 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 ZNF609O15014 1411 aa-0.21□□□□□ -2.44
SPC25-204ENST00000479309 FAM92AA1XBS5 289 aa-0.22□□□□□ -2.44
SPC25-204ENST00000479309 K7ERU9 68 aa-0.22□□□□□ -2.44
SPC25-204ENST00000479309 ARPC5O15511 151 aa-0.22□□□□□ -2.44
SPC25-204ENST00000479309 WFDC2Q14508 124 aa-0.22□□□□□ -2.44
SPC25-204ENST00000479309 BAGE3Q86Y29 109 aa-0.22□□□□□ -2.44
SPC25-204ENST00000479309 NCOR1O75376 2440 aa-0.22□□□□□ -2.44
SPC25-204ENST00000479309 MYOM3Q5VTT5 1437 aa-0.22□□□□□ -2.45
SPC25-204ENST00000479309 PTPN13Q12923 2485 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 UNC13AQ9UPW8 1703 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 KIAA0100Q14667 2235 aaKnown RBP-0.23□□□□□ -2.45
SPC25-204ENST00000479309 NPFFO15130 113 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 SNCGO76070 127 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 NDUFB6O95139 128 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 GUCA1AP43080 201 aaPredicted RBP-0.23□□□□□ -2.45
SPC25-204ENST00000479309 CCL8P80075 99 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 ALX1Q15699 326 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 CFAP126Q5VTH2 177 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 SPTSSBQ8NFR3 76 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 COPZ2Q9P299 210 aa-0.23□□□□□ -2.45
SPC25-204ENST00000479309 TRAV22A0A0B4J277 110 aa-0.24□□□□□ -2.45
SPC25-204ENST00000479309 DEFB109BQ30KR1 87 aa-0.24□□□□□ -2.45
SPC25-204ENST00000479309 TSTD1Q8NFU3 115 aa-0.24□□□□□ -2.45
SPC25-204ENST00000479309 LINC00312Q9Y6C7 94 aa-0.24□□□□□ -2.45
SPC25-204ENST00000479309 CASKIN1Q8WXD9 1431 aa-0.24□□□□□ -2.45
SPC25-204ENST00000479309 ZNF518AQ6AHZ1 1483 aa-0.24□□□□□ -2.45
SPC25-204ENST00000479309 PPRC1Q5VV67 1664 aaKnown RBP-0.24□□□□□ -2.45
SPC25-204ENST00000479309 HMCN2Q8NDA2 5059 aa-0.24□□□□□ -2.45
SPC25-204ENST00000479309 PRDM2Q13029 1718 aa-0.24□□□□□ -2.45
SPC25-204ENST00000479309 MYH6P13533 1939 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 FAM208BQ5VWN6 2430 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 CCL18P55774 89 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 SMIM21Q3B7S5 101 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 S100A7L2Q5SY68 101 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 Q5VSD8 79 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 KCNRGQ8N5I3 272 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 ANP32BQ92688 251 aaKnown RBP-0.25□□□□□ -2.45
SPC25-204ENST00000479309 TCEAL4Q96EI5 215 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 SEC11CQ9BY50 192 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 TMEM191AQ9H0A3 160 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 TPT1P8Q9HAU6 139 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 NPVFQ9HCQ7 196 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 SPCS1Q9Y6A9 102 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 IFT140Q96RY7 1462 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 KDM3BQ7LBC6 1761 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 SPEF2Q9C093 1822 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 MYH9P35579 1960 aaKnown RBP-0.25□□□□□ -2.45
SPC25-204ENST00000479309 PKD1L1Q8TDX9 2849 aa-0.25□□□□□ -2.45
SPC25-204ENST00000479309 DOCK11Q5JSL3 2073 aa-0.26□□□□□ -2.45
SPC25-204ENST00000479309 PIGBOS1A0A0B4J2F0 54 aa-0.26□□□□□ -2.45
SPC25-204ENST00000479309 COPZ1P61923 177 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms