RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 MIF4GDA9UHW6 222 aaKnown RBP0.79□□□□□ -2.28
VLDLR-204ENST00000478776 APOC4-APOC2K7ER74 178 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 APOC2P02655 101 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 GNG4P50150 75 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 RPL37P61927 97 aaKnown RBP0.79□□□□□ -2.28
VLDLR-204ENST00000478776 MRPS10P82664 201 aaKnown RBP0.79□□□□□ -2.28
VLDLR-204ENST00000478776 FAM74A4Q5TZK3 123 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 C4orf33Q8N1A6 199 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 SPTSSBQ8NFR3 76 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 COX7B2Q8TF08 81 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 CGREF1Q99674 301 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 GNG8Q9UK08 70 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 KTN1Q86UP2 1357 aaKnown RBP0.79□□□□□ -2.28
VLDLR-204ENST00000478776 RBBP6Q7Z6E9 1792 aaKnown RBP0.78□□□□□ -2.28
VLDLR-204ENST00000478776 A0A087WTM6 91 aa0.78□□□□□ -2.28
VLDLR-204ENST00000478776 TRBV7-1A0A0A6YYK4 115 aa0.78□□□□□ -2.28
VLDLR-204ENST00000478776 LY6G6CO95867 125 aa0.78□□□□□ -2.28
VLDLR-204ENST00000478776 SPINT3P49223 89 aa0.78□□□□□ -2.28
VLDLR-204ENST00000478776 SPINK9Q5DT21 86 aa0.78□□□□□ -2.28
VLDLR-204ENST00000478776 PPP3R2Q96LZ3 170 aa0.78□□□□□ -2.28
VLDLR-204ENST00000478776 TRAV13-2A0A0B4J235 113 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 CLPSL1A2RUU4 121 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 SNAPC5O75971 98 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 SIX6O95475 246 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 TPPP2P59282 170 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 CATR1Q13166 79 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 INSL4Q14641 139 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 SPANXDQ9BXN6 97 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 IER3IP1Q9Y5U9 82 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 V9GYV3 84 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 CASKIN1Q8WXD9 1431 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 PXDNQ92626 1479 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 LRRC37A3O60309 1634 aa0.77□□□□□ -2.29
VLDLR-204ENST00000478776 PATJQ8NI35 1801 aa0.76□□□□□ -2.29
VLDLR-204ENST00000478776 ARFGEF1Q9Y6D6 1849 aa0.76□□□□□ -2.29
VLDLR-204ENST00000478776 HCG22E2RYF7 251 aa0.76□□□□□ -2.29
VLDLR-204ENST00000478776 S100PP25815 95 aa0.76□□□□□ -2.29
VLDLR-204ENST00000478776 ZNF137PP52743 207 aa0.76□□□□□ -2.29
VLDLR-204ENST00000478776 RBM3P98179 157 aaKnown RBP0.76□□□□□ -2.29
VLDLR-204ENST00000478776 MRPL54Q6P161 138 aaKnown RBP0.76□□□□□ -2.29
VLDLR-204ENST00000478776 C8orf59Q8N0T1 100 aaPredicted RBP0.76□□□□□ -2.29
VLDLR-204ENST00000478776 ZDBF2Q9HCK1 2354 aa0.76□□□□□ -2.29
VLDLR-204ENST00000478776 SIPA1L3O60292 1781 aaPredicted RBP0.75□□□□□ -2.29
VLDLR-204ENST00000478776 CPSF1Q10570 1443 aaKnown RBP0.75□□□□□ -2.29
VLDLR-204ENST00000478776 S100A1P23297 94 aa0.75□□□□□ -2.29
VLDLR-204ENST00000478776 EDDM3BP56851 147 aa0.75□□□□□ -2.29
VLDLR-204ENST00000478776 PPP3R1P63098 170 aa0.75□□□□□ -2.29
VLDLR-204ENST00000478776 LINC00312Q9Y6C7 94 aa0.75□□□□□ -2.29
VLDLR-204ENST00000478776 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
VLDLR-204ENST00000478776 ARAP2Q8WZ64 1704 aa0.75□□□□□ -2.29
VLDLR-204ENST00000478776 NRKQ7Z2Y5 1582 aa0.74□□□□□ -2.29
VLDLR-204ENST00000478776 MAPKBP1O60336 1514 aa0.74□□□□□ -2.29
VLDLR-204ENST00000478776 TANC1Q9C0D5 1861 aa0.74□□□□□ -2.29
VLDLR-204ENST00000478776 OOSP1A8MZH6 123 aa0.74□□□□□ -2.29
VLDLR-204ENST00000478776 C6orf52Q5T4I8 152 aa0.74□□□□□ -2.29
VLDLR-204ENST00000478776 C9orf153Q5TBE3 101 aa0.74□□□□□ -2.29
VLDLR-204ENST00000478776 C5orf38Q86SI9 138 aa0.74□□□□□ -2.29
VLDLR-204ENST00000478776 Q96NJ1 140 aa0.74□□□□□ -2.29
VLDLR-204ENST00000478776 ROBO1Q9Y6N7 1651 aa0.74□□□□□ -2.29
VLDLR-204ENST00000478776 PZPP20742 1482 aa0.73□□□□□ -2.29
VLDLR-204ENST00000478776 LOC285556D6RIA3 1793 aa0.73□□□□□ -2.29
VLDLR-204ENST00000478776 TNS1Q9HBL0 1735 aaKnown RBP0.73□□□□□ -2.29
VLDLR-204ENST00000478776 A0A0D9SG42 100 aa0.73□□□□□ -2.29
VLDLR-204ENST00000478776 SSSCA1O60232 199 aa0.73□□□□□ -2.29
VLDLR-204ENST00000478776 AQP10Q96PS8 301 aa0.73□□□□□ -2.29
VLDLR-204ENST00000478776 TCEAL7Q9BRU2 100 aa0.73□□□□□ -2.29
VLDLR-204ENST00000478776 MYH8P13535 1937 aa0.73□□□□□ -2.29
VLDLR-204ENST00000478776 NOTCH1P46531 2555 aa0.73□□□□□ -2.29
VLDLR-204ENST00000478776 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
VLDLR-204ENST00000478776 DOCK1Q14185 1865 aa0.73□□□□□ -2.29
VLDLR-204ENST00000478776 CDK13Q14004 1512 aaKnown RBP0.73□□□□□ -2.29
VLDLR-204ENST00000478776 PPIP5K1Q6PFW1 1433 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 ASH1LQ9NR48 2969 aaKnown RBP0.72□□□□□ -2.29
VLDLR-204ENST00000478776 KNTC1P50748 2209 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 MED13LQ71F56 2210 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 SHROOM2Q13796 1616 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 C20orf202A1L168 122 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 F2Z2F3 143 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 COMMD6Q7Z4G1 85 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 BPESC1Q9GZL8 116 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 CYP4F30PQ9H0H9 118 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 SCP2D1Q9UJQ7 156 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 DOCK2Q92608 1830 aa0.72□□□□□ -2.29
VLDLR-204ENST00000478776 FBN2P35556 2912 aa0.71□□□□□ -2.29
VLDLR-204ENST00000478776 ABCA1O95477 2261 aa0.71□□□□□ -2.3
VLDLR-204ENST00000478776 ATP5EP56381 51 aaPredicted RBP0.71□□□□□ -2.3
VLDLR-204ENST00000478776 PRB3Q04118 309 aaPredicted RBP0.71□□□□□ -2.3
VLDLR-204ENST00000478776 SVBPQ8N300 66 aa0.71□□□□□ -2.3
VLDLR-204ENST00000478776 SMIM11BQ8TCY0 68 aa0.71□□□□□ -2.3
VLDLR-204ENST00000478776 WFDC6Q9BQY6 131 aa0.71□□□□□ -2.3
VLDLR-204ENST00000478776 PRDM2Q13029 1718 aa0.71□□□□□ -2.3
VLDLR-204ENST00000478776 GVQW2A0A096LPI5 108 aaPredicted RBP0.7□□□□□ -2.3
VLDLR-204ENST00000478776 UBE2L5PA0A1B0GUS4 154 aa0.7□□□□□ -2.3
VLDLR-204ENST00000478776 FAM24AA6NFZ4 105 aa0.7□□□□□ -2.3
VLDLR-204ENST00000478776 IFITM1P13164 125 aa0.7□□□□□ -2.3
VLDLR-204ENST00000478776 ACYP2P14621 99 aa0.7□□□□□ -2.3
VLDLR-204ENST00000478776 UBE2L3P68036 154 aaKnown RBP0.7□□□□□ -2.3
VLDLR-204ENST00000478776 C10orf128Q5T292 105 aa0.7□□□□□ -2.3
VLDLR-204ENST00000478776 GTF2H5Q6ZYL4 71 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms