RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 C20orf197Q8N268 126 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 IFI27L1Q96BM0 104 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 WFDC6Q9BQY6 131 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 TAF9BQ9HBM6 251 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 TP53AIP1Q9HCN2 124 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 CBLN4Q9NTU7 201 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 SCN3BQ9NY72 215 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 NOP16Q9Y3C1 178 aaKnown RBP-0.52□□□□□ -2.49
HPS3-205ENST00000478525 TCHHQ07283 1943 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 DOCK2Q92608 1830 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 ERCC6L2Q5T890 1561 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 EIF3AQ14152 1382 aaKnown RBP-0.53□□□□□ -2.49
HPS3-205ENST00000478525 MYH6P13533 1939 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 FXYD6-FXYD2A0A087WZ82 144 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 TRBV6-1A0A0K0K1D8 114 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 A0A1B0GW64 132 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 FAM92AA1XBS5 289 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 J3QLW9 94 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 TNFP01375 233 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 SLC25A6P12236 298 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 EDDM3BP56851 147 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 GNG3P63215 75 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 BASP1P80723 227 aaKnown RBP-0.53□□□□□ -2.49
HPS3-205ENST00000478525 RBM3P98179 157 aaKnown RBP-0.53□□□□□ -2.49
HPS3-205ENST00000478525 RPL7L1Q6DKI1 246 aaKnown RBP-0.53□□□□□ -2.49
HPS3-205ENST00000478525 SCIMPQ6UWF3 145 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 ATP11AUNQ6ZP68 121 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 OR9Q1Q8NGQ5 310 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 NPVFQ9HCQ7 196 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 SAR1AQ9NR31 198 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 CALML5Q9NZT1 146 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 XIRP1Q702N8 1843 aaKnown RBP-0.53□□□□□ -2.49
HPS3-205ENST00000478525 NWD2Q9ULI1 1742 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 LAMC1P11047 1609 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 SYNMO15061 1565 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 LAMA5O15230 3695 aa-0.53□□□□□ -2.49
HPS3-205ENST00000478525 TRAV1-2A0A0B4J238 106 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 TRAV12-3A0A0B4J271 114 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 G3V318 75 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 PIRTP0C851 137 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 SERPINB1P30740 379 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 SPANXN1Q5VSR9 72 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 SPAG11AQ6PDA7 123 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 SNX29P2Q8IUI4 249 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 CTAGE3PQ8IX95 158 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 CHMP6Q96FZ7 201 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 RPRMQ9NS64 109 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 SS18L2Q9UHA2 77 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 MED31Q9Y3C7 131 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 KIAA1109Q2LD37 5005 aa-0.54□□□□□ -2.5
HPS3-205ENST00000478525 DAPK1P53355 1430 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 PIGBOS1A0A0B4J2F0 54 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 DPM2O94777 84 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 SLC25A5P05141 298 aaKnown RBP-0.55□□□□□ -2.5
HPS3-205ENST00000478525 SPRR2EP22531 72 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 COX17Q14061 63 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 KLK9Q2XQG4 91 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 CFAP126Q5VTH2 177 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 TRIQKQ629K1 86 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 TOMM20LQ6UXN7 152 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 ZNF818PQ6ZRF7 136 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 STX12Q86Y82 276 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 CARD19Q96LW7 228 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 CCDC115Q96NT0 180 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 SPANXA1Q9NS26 97 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 R4GMQ9 66 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 UBR4Q5T4S7 5183 aa-0.55□□□□□ -2.5
HPS3-205ENST00000478525 LRP6O75581 1613 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 PAPPAQ13219 1627 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 CDK5RAP2Q96SN8 1893 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 KDM5CP41229 1560 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 SVEP1Q4LDE5 3571 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 J3KT08 172 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 PAEPP09466 180 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 HLA-DRB4P13762 266 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 SPRR1BP22528 89 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 CRYBA4P53673 196 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 TMEM78Q5T7P6 136 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 TMEM91Q6ZNR0 172 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 THEM6Q8WUY1 208 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 SKA2Q8WVK7 121 aaPredicted RBP-0.56□□□□□ -2.5
HPS3-205ENST00000478525 AGPAT4-IT1Q9H0P7 198 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 HLA-DRB4X5D2U9 266 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 PRDM2Q13029 1718 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 PXDNQ92626 1479 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 KDM5AP29375 1690 aaKnown RBP-0.56□□□□□ -2.5
HPS3-205ENST00000478525 EPG5Q9HCE0 2579 aa-0.56□□□□□ -2.5
HPS3-205ENST00000478525 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.57□□□□□ -2.5
HPS3-205ENST00000478525 IBTKQ9P2D0 1353 aaPredicted RBP-0.57□□□□□ -2.5
HPS3-205ENST00000478525 STARD9Q9P2P6 4700 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 RYR3Q15413 4870 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 SPG11Q96JI7 2443 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 M0QZK8 103 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 BCE1O60756 84 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 IFNGP01579 166 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 TCRAP04437 139 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 PIPP12273 146 aaPredicted RBP-0.57□□□□□ -2.5
HPS3-205ENST00000478525 POLR2HP52434 150 aaKnown RBP-0.57□□□□□ -2.5
HPS3-205ENST00000478525 B2MP61769 119 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 NPC2P61916 151 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms