RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CNFNQ9BYD5 112 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 GTSF1LQ9H1H1 148 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 DPH3P1Q9H4G8 78 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 EPPK1P58107 5090 aaKnown RBP7□□□□□ -1.29
HDAC6-222ENST00000478095 IGHV3-38A0A0C4DH36 116 aa7□□□□□ -1.29
HDAC6-222ENST00000478095 H3BS24 57 aa7□□□□□ -1.29
HDAC6-222ENST00000478095 RTL8CO15255 209 aa7□□□□□ -1.29
HDAC6-222ENST00000478095 TIRAPP58753 221 aa7□□□□□ -1.29
HDAC6-222ENST00000478095 TTC32Q5I0X7 151 aa7□□□□□ -1.29
HDAC6-222ENST00000478095 LELP1Q5T871 98 aa7□□□□□ -1.29
HDAC6-222ENST00000478095 C1orf134Q5TEV5 83 aa7□□□□□ -1.29
HDAC6-222ENST00000478095 WDR73Q6P4I2 378 aa7□□□□□ -1.29
HDAC6-222ENST00000478095 BORCS7Q96B45 105 aa7□□□□□ -1.29
HDAC6-222ENST00000478095 TRBV7-3A0A075B6L6 115 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 TRAV8-6A0A0B4J262 113 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 TRAV26-2A0A0B4J265 109 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 UBE2D3P61077 147 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 UBE2D2P62837 147 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 COMMD7Q86VX2 200 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 C6orf223Q8N319 242 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 KRTAP9-2Q9BYQ4 174 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 GFRA4Q9GZZ7 299 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 DNAH10Q8IVF4 4471 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
HDAC6-222ENST00000478095 A0A1B0GUT8 65 aa6.98□□□□□ -1.29
HDAC6-222ENST00000478095 M0QY20 66 aa6.98□□□□□ -1.29
HDAC6-222ENST00000478095 IGHV3-30P01768 117 aa6.98□□□□□ -1.29
HDAC6-222ENST00000478095 IGHV3-33P01772 117 aa6.98□□□□□ -1.29
HDAC6-222ENST00000478095 IGHV3-30-3P0DP02 117 aa6.98□□□□□ -1.29
HDAC6-222ENST00000478095 IGHV3-30-5P0DP03 117 aa6.98□□□□□ -1.29
HDAC6-222ENST00000478095 SMIM15Q7Z3B0 74 aa6.98□□□□□ -1.29
HDAC6-222ENST00000478095 NUP35Q8NFH5 326 aa6.98□□□□□ -1.29
HDAC6-222ENST00000478095 FAM231BA6NCW3 169 aa6.97□□□□□ -1.29
HDAC6-222ENST00000478095 H7C1H1 209 aa6.97□□□□□ -1.29
HDAC6-222ENST00000478095 DNAH10OSP0CZ25 163 aa6.97□□□□□ -1.29
HDAC6-222ENST00000478095 ADCYAP1P18509 176 aa6.97□□□□□ -1.29
HDAC6-222ENST00000478095 UQCC3Q6UW78 93 aa6.97□□□□□ -1.29
HDAC6-222ENST00000478095 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
HDAC6-222ENST00000478095 TNFRSF18Q9Y5U5 241 aa6.97□□□□□ -1.29
HDAC6-222ENST00000478095 A0A087WWC5 75 aa6.96□□□□□ -1.3
HDAC6-222ENST00000478095 SMIM27A0A1W2PRY6 76 aa6.96□□□□□ -1.3
HDAC6-222ENST00000478095 TMEM218A2RU14 115 aa6.96□□□□□ -1.3
HDAC6-222ENST00000478095 PRSS29PA6NIE9 313 aa6.96□□□□□ -1.3
HDAC6-222ENST00000478095 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-222ENST00000478095 LINC01556Q5JQF7 62 aa6.96□□□□□ -1.3
HDAC6-222ENST00000478095 RASL11AQ6T310 242 aa6.96□□□□□ -1.3
HDAC6-222ENST00000478095 LINC00336Q6ZUF6 198 aa6.96□□□□□ -1.3
HDAC6-222ENST00000478095 GATD1Q8NB37 220 aa6.96□□□□□ -1.3
HDAC6-222ENST00000478095 DEFB104AQ8WTQ1 72 aa6.96□□□□□ -1.3
HDAC6-222ENST00000478095 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
HDAC6-222ENST00000478095 F8W036 122 aa6.95□□□□□ -1.3
HDAC6-222ENST00000478095 PNRC1Q12796 327 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-222ENST00000478095 RIGQ13278 110 aa6.95□□□□□ -1.3
HDAC6-222ENST00000478095 AMN1Q8IY45 258 aa6.95□□□□□ -1.3
HDAC6-222ENST00000478095 RPL39LQ96EH5 51 aaKnown RBP6.95□□□□□ -1.3
HDAC6-222ENST00000478095 TRBV6-8A0A0A6YYG3 113 aa6.94□□□□□ -1.3
HDAC6-222ENST00000478095 KRTAP9-6A0A140TA67 174 aa6.94□□□□□ -1.3
HDAC6-222ENST00000478095 GAS8-AS1O95177 125 aa6.94□□□□□ -1.3
HDAC6-222ENST00000478095 CAMPP49913 170 aa6.94□□□□□ -1.3
HDAC6-222ENST00000478095 MRPL54Q6P161 138 aaKnown RBP6.94□□□□□ -1.3
HDAC6-222ENST00000478095 DAZ4Q86SG3 579 aaKnown RBP6.94□□□□□ -1.3
HDAC6-222ENST00000478095 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-222ENST00000478095 RNF185Q96GF1 192 aa6.94□□□□□ -1.3
HDAC6-222ENST00000478095 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
HDAC6-222ENST00000478095 TMEM191AQ9H0A3 160 aa6.94□□□□□ -1.3
HDAC6-222ENST00000478095 NIT2Q9NQR4 276 aa6.94□□□□□ -1.3
HDAC6-222ENST00000478095 DAZ3Q9NR90 486 aaKnown RBP6.94□□□□□ -1.3
HDAC6-222ENST00000478095 BIRC6Q9NR09 4857 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 LINC00862A6NCI5 91 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 PPP1R2P9O14990 202 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 NCR2O95944 276 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 MT-ND4LP03901 98 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 NTM-AS1Q6ZSK4 140 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 NIT1Q86X76 327 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 C10orf126Q8N4M7 172 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 Q9HAA7 133 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
HDAC6-222ENST00000478095 FRAS1Q86XX4 4008 aa6.92□□□□□ -1.3
HDAC6-222ENST00000478095 DNAH17Q9UFH2 4485 aa6.92□□□□□ -1.3
HDAC6-222ENST00000478095 TMEM262E9PQX1 116 aa6.92□□□□□ -1.3
HDAC6-222ENST00000478095 SMKR1H3BMG3 65 aa6.92□□□□□ -1.3
HDAC6-222ENST00000478095 RAB4AP20338 218 aa6.92□□□□□ -1.3
HDAC6-222ENST00000478095 Q6ZRN7 208 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-222ENST00000478095 CHCHD5Q9BSY4 110 aa6.92□□□□□ -1.3
HDAC6-222ENST00000478095 URGCP-MRPS24S4R325 110 aa6.92□□□□□ -1.3
HDAC6-222ENST00000478095 A0A087WX48 190 aa6.91□□□□□ -1.3
HDAC6-222ENST00000478095 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
HDAC6-222ENST00000478095 K7EP13 123 aa6.91□□□□□ -1.3
HDAC6-222ENST00000478095 RPS10P46783 165 aaKnown RBP6.91□□□□□ -1.3
HDAC6-222ENST00000478095 HBBP68871 147 aa6.91□□□□□ -1.3
HDAC6-222ENST00000478095 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
HDAC6-222ENST00000478095 SEC11CQ9BY50 192 aa6.91□□□□□ -1.3
HDAC6-222ENST00000478095 TRBV25-1A0A075B6N4 114 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 IGHV1-24A0A0C4DH33 117 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 A0A1B0GW15 77 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 A0A1B0GXF2 115 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 IBA57-AS1B1ANH7 110 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 BTF3P20290 206 aaKnown RBP6.9□□□□□ -1.3
HDAC6-222ENST00000478095 GAGE6Q13070 117 aa6.9□□□□□ -1.3
HDAC6-222ENST00000478095 COTL1Q14019 142 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms