RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 GAGE5Q13069 117 aa13.78□□□□□ -0.2
ACTB-210ENST00000477812 GAGE13Q4V321 117 aa13.78□□□□□ -0.2
ACTB-210ENST00000477812 NEGR1Q7Z3B1 354 aa13.78□□□□□ -0.2
ACTB-210ENST00000477812 FRZBQ92765 325 aa13.78□□□□□ -0.2
ACTB-210ENST00000477812 H7C1H1 209 aa13.77□□□□□ -0.21
ACTB-210ENST00000477812 GAS8-AS1O95177 125 aa13.77□□□□□ -0.21
ACTB-210ENST00000477812 RASL11AQ6T310 242 aa13.77□□□□□ -0.21
ACTB-210ENST00000477812 YPEL4Q96NS1 127 aa13.77□□□□□ -0.21
ACTB-210ENST00000477812 TRBV7-3A0A075B6L6 115 aa13.76□□□□□ -0.21
ACTB-210ENST00000477812 UBE2D3P61077 147 aa13.76□□□□□ -0.21
ACTB-210ENST00000477812 UBE2D2P62837 147 aa13.76□□□□□ -0.21
ACTB-210ENST00000477812 ESRGQ1W209 222 aa13.76□□□□□ -0.21
ACTB-210ENST00000477812 LGALS9CQ6DKI2 356 aa13.76□□□□□ -0.21
ACTB-210ENST00000477812 SH2D6Q7Z4S9 175 aa13.76□□□□□ -0.21
ACTB-210ENST00000477812 LINC00476Q8WZB0 136 aa13.76□□□□□ -0.21
ACTB-210ENST00000477812 SACSQ9NZJ4 4579 aa13.76□□□□□ -0.21
ACTB-210ENST00000477812 RPL36AP83881 106 aaKnown RBP13.75□□□□□ -0.21
ACTB-210ENST00000477812 MRPL51Q4U2R6 128 aaKnown RBP13.75□□□□□ -0.21
ACTB-210ENST00000477812 ZNRF2Q8NHG8 242 aa13.75□□□□□ -0.21
ACTB-210ENST00000477812 RPL36ALQ969Q0 106 aaKnown RBP13.75□□□□□ -0.21
ACTB-210ENST00000477812 MRAP2Q96G30 205 aa13.75□□□□□ -0.21
ACTB-210ENST00000477812 KMT2CQ8NEZ4 4911 aaKnown RBP13.75□□□□□ -0.21
ACTB-210ENST00000477812 TIRAPP58753 221 aa13.74□□□□□ -0.21
ACTB-210ENST00000477812 ELOBQ15370 118 aa13.74□□□□□ -0.21
ACTB-210ENST00000477812 LYPD5Q6UWN5 251 aa13.74□□□□□ -0.21
ACTB-210ENST00000477812 TMEM136Q6ZRR5 245 aa13.74□□□□□ -0.21
ACTB-210ENST00000477812 RPL39LQ96EH5 51 aaKnown RBP13.74□□□□□ -0.21
ACTB-210ENST00000477812 DNAJC30Q96LL9 226 aa13.74□□□□□ -0.21
ACTB-210ENST00000477812 NIT2Q9NQR4 276 aa13.74□□□□□ -0.21
ACTB-210ENST00000477812 LINC00588Q9Y4M8 146 aa13.74□□□□□ -0.21
ACTB-210ENST00000477812 RPS10P46783 165 aaKnown RBP13.73□□□□□ -0.21
ACTB-210ENST00000477812 CBLN2Q8IUK8 224 aa13.73□□□□□ -0.21
ACTB-210ENST00000477812 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
ACTB-210ENST00000477812 TRBV24-1A0A075B6N3 115 aa13.72□□□□□ -0.21
ACTB-210ENST00000477812 TGIF2-C20orf24A0A0A6YYL0 155 aa13.72□□□□□ -0.21
ACTB-210ENST00000477812 CCL18P55774 89 aa13.72□□□□□ -0.21
ACTB-210ENST00000477812 TRBV6-5A0A0K0K1A5 114 aa13.71□□□□□ -0.21
ACTB-210ENST00000477812 LCE6AA0A183 80 aa13.71□□□□□ -0.21
ACTB-210ENST00000477812 SMKR1H3BMG3 65 aa13.71□□□□□ -0.21
ACTB-210ENST00000477812 NCR2O95944 276 aa13.71□□□□□ -0.21
ACTB-210ENST00000477812 NRACQ8N912 160 aa13.71□□□□□ -0.21
ACTB-210ENST00000477812 MRPS16Q9Y3D3 137 aaKnown RBP13.71□□□□□ -0.21
ACTB-210ENST00000477812 UPK3BQ9BT76 320 aa13.7□□□□□ -0.22
ACTB-210ENST00000477812 GTSF1LQ9H1H1 148 aa13.7□□□□□ -0.22
ACTB-210ENST00000477812 SMCO4Q9NRQ5 59 aa13.7□□□□□ -0.22
ACTB-210ENST00000477812 TNFRSF18Q9Y5U5 241 aa13.7□□□□□ -0.22
ACTB-210ENST00000477812 GNB1LQ9BYB4 327 aa13.69□□□□□ -0.22
ACTB-210ENST00000477812 OR10J3Q5JRS4 329 aa13.68□□□□□ -0.22
ACTB-210ENST00000477812 DAZ4Q86SG3 579 aaKnown RBP13.68□□□□□ -0.22
ACTB-210ENST00000477812 DAZ3Q9NR90 486 aaKnown RBP13.68□□□□□ -0.22
ACTB-210ENST00000477812 IGHV3-38A0A0C4DH36 116 aa13.67□□□□□ -0.22
ACTB-210ENST00000477812 D6R8Y8 96 aa13.67□□□□□ -0.22
ACTB-210ENST00000477812 LY6G6CO95867 125 aa13.67□□□□□ -0.22
ACTB-210ENST00000477812 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
ACTB-210ENST00000477812 PPBPP02775 128 aa13.67□□□□□ -0.22
ACTB-210ENST00000477812 COX19Q49B96 90 aa13.67□□□□□ -0.22
ACTB-210ENST00000477812 UBE2DNLQ8IWF7 75 aa13.67□□□□□ -0.22
ACTB-210ENST00000477812 CKS2P33552 79 aa13.66□□□□□ -0.22
ACTB-210ENST00000477812 LELP1Q5T871 98 aa13.66□□□□□ -0.22
ACTB-210ENST00000477812 DNAH6Q9C0G6 4158 aa13.65□□□□□ -0.22
ACTB-210ENST00000477812 SDHAF1A6NFY7 115 aa13.65□□□□□ -0.22
ACTB-210ENST00000477812 NTM-AS1Q6ZSK4 140 aa13.65□□□□□ -0.22
ACTB-210ENST00000477812 ORMDL3Q8N138 153 aa13.65□□□□□ -0.22
ACTB-210ENST00000477812 PPP1R17O96001 155 aa13.64□□□□□ -0.23
ACTB-210ENST00000477812 NPYP01303 97 aa13.64□□□□□ -0.23
ACTB-210ENST00000477812 MT-ND6P03923 174 aa13.64□□□□□ -0.23
ACTB-210ENST00000477812 POLR2KP53803 58 aaKnown RBP13.64□□□□□ -0.23
ACTB-210ENST00000477812 TMEM70Q9BUB7 260 aa13.64□□□□□ -0.23
ACTB-210ENST00000477812 ST20Q9HBF5 79 aa13.64□□□□□ -0.23
ACTB-210ENST00000477812 TRBV6-8A0A0A6YYG3 113 aa13.63□□□□□ -0.23
ACTB-210ENST00000477812 PHOX2AO14813 284 aa13.63□□□□□ -0.23
ACTB-210ENST00000477812 SCO1O75880 301 aa13.63□□□□□ -0.23
ACTB-210ENST00000477812 TNFRSF6BO95407 300 aa13.63□□□□□ -0.23
ACTB-210ENST00000477812 APCSP02743 223 aa13.63□□□□□ -0.23
ACTB-210ENST00000477812 SUMO2P61956 95 aaKnown RBP13.63□□□□□ -0.23
ACTB-210ENST00000477812 WFDC10BQ8IUB3 73 aa13.63□□□□□ -0.23
ACTB-210ENST00000477812 KMT2AQ03164 3969 aa13.63□□□□□ -0.23
ACTB-210ENST00000477812 RYR2Q92736 4967 aa13.62□□□□□ -0.23
ACTB-210ENST00000477812 HYDINQ4G0P3 5121 aa13.62□□□□□ -0.23
ACTB-210ENST00000477812 TRBV27A0A0K0K1C4 114 aa13.62□□□□□ -0.23
ACTB-210ENST00000477812 PRELID3AQ96N28 172 aa13.62□□□□□ -0.23
ACTB-210ENST00000477812 C20orf78Q9BR46 151 aa13.62□□□□□ -0.23
ACTB-210ENST00000477812 RPL32P62910 135 aaKnown RBP13.61□□□□□ -0.23
ACTB-210ENST00000477812 MRPL18Q9H0U6 180 aaKnown RBP13.61□□□□□ -0.23
ACTB-210ENST00000477812 LAMTOR2Q9Y2Q5 125 aa13.61□□□□□ -0.23
ACTB-210ENST00000477812 IQCJQ1A5X6 159 aa13.6□□□□□ -0.23
ACTB-210ENST00000477812 KIAA1644Q3SXP7 199 aa13.6□□□□□ -0.23
ACTB-210ENST00000477812 TMEM97Q5BJF2 176 aa13.6□□□□□ -0.23
ACTB-210ENST00000477812 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.6□□□□□ -0.23
ACTB-210ENST00000477812 COLCA2A8K830 154 aa13.59□□□□□ -0.23
ACTB-210ENST00000477812 DEFB104AQ8WTQ1 72 aa13.59□□□□□ -0.23
ACTB-210ENST00000477812 Q9H8V8 135 aa13.59□□□□□ -0.23
ACTB-210ENST00000477812 TRAV8-6A0A0B4J262 113 aa13.58□□□□□ -0.24
ACTB-210ENST00000477812 PRSS47A8MTI9 375 aa13.58□□□□□ -0.24
ACTB-210ENST00000477812 I3L3M4 83 aa13.58□□□□□ -0.24
ACTB-210ENST00000477812 SIVA1O15304 175 aa13.58□□□□□ -0.24
ACTB-210ENST00000477812 TSHBP01222 138 aa13.58□□□□□ -0.24
ACTB-210ENST00000477812 DNAH10OSP0CZ25 163 aa13.58□□□□□ -0.24
ACTB-210ENST00000477812 COTL1Q14019 142 aa13.58□□□□□ -0.24
ACTB-210ENST00000477812 SMIM2Q9BVW6 85 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms