RNA–Protein interactions for RNA: ENST00000477342.1

PEX1-207, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-207ENST00000477342 ABCA1O95477 2261 aa0.44□□□□□ -2.34
PEX1-207ENST00000477342 CFTRP13569 1480 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 BCL9LQ86UU0 1499 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
PEX1-207ENST00000477342 RYR1P21817 5038 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 RYR2Q92736 4967 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 EFCAB10A6NFE3 127 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 FAM25AB3EWG3 89 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 FAM25CB3EWG5 89 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 FAM25GB3EWG6 89 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 IL5P05113 134 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 PIRTP0C851 137 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 SELENOWP63302 87 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 MIC13Q5XKP0 118 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 C20orf197Q8N268 126 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 COX7B2Q8TF08 81 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 RPRMQ9NS64 109 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 TMEM242Q9NWH2 141 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 SCP2D1Q9UJQ7 156 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 V9GYV3 84 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 KMT2CQ8NEZ4 4911 aaKnown RBP0.43□□□□□ -2.34
PEX1-207ENST00000477342 NCOA3Q9Y6Q9 1424 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 ERCC6L2Q5T890 1561 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 RIMS1Q86UR5 1692 aaKnown RBP0.43□□□□□ -2.34
PEX1-207ENST00000477342 PSME4Q14997 1843 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 SBF2Q86WG5 1849 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 PI4KAP42356 2102 aa0.43□□□□□ -2.34
PEX1-207ENST00000477342 F5P12259 2224 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 DOCK11Q5JSL3 2073 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 DSTQ03001 7570 aaKnown RBP0.42□□□□□ -2.34
PEX1-207ENST00000477342 PTPN13Q12923 2485 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 CHD8Q9HCK8 2581 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 TRBV7-1A0A0A6YYK4 115 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 SNCGO76070 127 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 NDUFB6O95139 128 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 CCL3L1P16619 93 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 C12orf73Q69YU5 71 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 LINC00470Q9BZP3 86 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 RERGLQ9H628 205 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 NEBP20929 6669 aa0.42□□□□□ -2.34
PEX1-207ENST00000477342 SETD2Q9BYW2 2564 aaPredicted RBP0.42□□□□□ -2.34
PEX1-207ENST00000477342 ZNF518AQ6AHZ1 1483 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 ARAP2Q8WZ64 1704 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 IFT172Q9UG01 1749 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 UNC13BO14795 1591 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 ANKRD17O75179 2603 aaKnown RBP0.41□□□□□ -2.34
PEX1-207ENST00000477342 PLXNB2O15031 1838 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 QRICH2Q9H0J4 1663 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 K7EP13 123 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 NDUFA2O43678 99 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 CBLN1P23435 193 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 NPC2P61916 151 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 SMIM11BQ8TCY0 68 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 PDCD10Q9BUL8 212 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 CDK13Q14004 1512 aaKnown RBP0.41□□□□□ -2.34
PEX1-207ENST00000477342 FAM135AQ9P2D6 1515 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 MAST4O15021 2626 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 PXDNQ92626 1479 aa0.41□□□□□ -2.34
PEX1-207ENST00000477342 USP9XQ93008 2570 aaPredicted RBP0.41□□□□□ -2.34
PEX1-207ENST00000477342 SETXQ7Z333 2677 aaKnown RBP0.41□□□□□ -2.34
PEX1-207ENST00000477342 TET3O43151 1660 aa0.4□□□□□ -2.34
PEX1-207ENST00000477342 SMG6Q86US8 1419 aaKnown RBP0.4□□□□□ -2.34
PEX1-207ENST00000477342 FRAS1Q86XX4 4008 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 KDM3BQ7LBC6 1761 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 TTC28Q96AY4 2481 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 APCP25054 2843 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 SHROOM2Q13796 1616 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 A0A1B0GV90 55 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 SMIM6P0DI80 62 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 FGF7P21781 194 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 BTG2P78543 158 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 C9orf116Q5BN46 136 aaPredicted RBP0.4□□□□□ -2.35
PEX1-207ENST00000477342 DPH3Q96FX2 82 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 SDF2Q99470 211 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 SNRNP25Q9BV90 132 aaKnown RBP0.4□□□□□ -2.35
PEX1-207ENST00000477342 NAA60Q9H7X0 242 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 ABCA3Q99758 1704 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 JMJD1CQ15652 2540 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 IFT140Q96RY7 1462 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 MBD5Q9P267 1494 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 RYR3Q15413 4870 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 TNCP24821 2201 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 MYO7AQ13402 2215 aa0.4□□□□□ -2.35
PEX1-207ENST00000477342 NAV2Q8IVL1 2488 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 SRCAPQ6ZRS2 3230 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 TRBV10-3A0A0K0K1G6 114 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 LINC00587B1AMM8 73 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 APOC4-APOC2K7ER74 178 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 GNG7O60262 68 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 ACYP2P14621 99 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 COX6A2Q02221 97 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 RPL13AP3Q6NVV1 102 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 ZNF818PQ6ZRF7 136 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 SPANXDQ9BXN6 97 aa0.39□□□□□ -2.35
PEX1-207ENST00000477342 ROCK2O75116 1388 aaKnown RBP0.39□□□□□ -2.35
PEX1-207ENST00000477342 KTN1Q86UP2 1357 aaKnown RBP0.39□□□□□ -2.35
PEX1-207ENST00000477342 IBTKQ9P2D0 1353 aaPredicted RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms