RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 LINC00862A6NCI5 91 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 C19orf71A6NCJ1 209 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 FAM231BA6NCW3 169 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 H3BNG1 76 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 H7C1H1 209 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 PRM2P04554 102 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 P0DMU3 169 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 FAM231AP0DMU4 169 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 FAM231CP0DMU5 169 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 SRIP30626 198 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 CRIP1P50238 77 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 CCL18P55774 89 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 SSTP61278 116 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 RPL23P62829 140 aaKnown RBP3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 RHOHQ15669 191 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 ZNF56Q15929 161 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 MRPL23Q16540 153 aaKnown RBP3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 WDR73Q6P4I2 378 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 ZFP2Q6ZN57 461 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 TSKUQ8WUA8 353 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 ISOC2Q96AB3 205 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 BTF3L4Q96K17 158 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 C9orf85Q96MD7 179 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 SEC11CQ9BY50 192 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 GFRA4Q9GZZ7 299 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 RNASE7Q9H1E1 156 aaKnown RBP3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 NAT8BQ9UHF3 227 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 HHLA3Q9XRX5 114 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 ICOSQ9Y6W8 199 aa3.17□□□□□ -1.9
NSMCE4A-208ENST00000477289 TRBV20OR9-2A0A075B6H5 130 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 TRAV26-1A0A087WT03 109 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 A0A0J9YY99 117 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 A0A1B0GUT8 65 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 A0A1B0GW15 77 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 hDV102S1A0JD36 115 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 PLAC8L1A1L4L8 177 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 K7EN84 100 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 RS1O15537 224 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 SNAI2O43623 268 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 SNAPINO95295 136 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 MGPP08493 103 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 RNASE3P12724 160 aaKnown RBP3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 CASC10Q5T4H9 136 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 LYZL1Q6UWQ5 148 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 Q6ZQT7 251 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 PGLYRP4Q96LB8 373 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 DPH3P1Q9H4G8 78 aa3.16□□□□□ -1.9
NSMCE4A-208ENST00000477289 IGHV3-73A0A0B4J1V6 119 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 MUC21A0A0G2JKD1 596 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 TRBV10-1A0A0K0K1A3 114 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 MUC21A0A140T8X8 626 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 TRBV6-4A0A1B0GX49 114 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 GAGE10A6NGK3 116 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 HIGD1CA8MV81 97 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 K7EQD1 137 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 LY6G6CO95867 125 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 PPP1R17O96001 155 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 APOC3P02656 99 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 CFC1BP0CG36 223 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 CFC1P0CG37 223 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 GZMBP10144 247 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 NTF3P20783 257 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 CRYBA4P53673 196 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 RAB4BP61018 213 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 RHEBQ15382 184 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 TMEM97Q5BJF2 176 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 CFAP126Q5VTH2 177 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 CFAP161Q6P656 301 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 NEGR1Q7Z3B1 354 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 SVBPQ8N300 66 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 LINC00612Q8N6U2 182 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 C14orf178Q8N769 122 aaPredicted RBP3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 OR10AG1Q8NH19 301 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 SCRT2Q9NQ03 307 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 RPS10P5Q9NQ39 176 aa3.15□□□□□ -1.91
NSMCE4A-208ENST00000477289 TRAV9-2A0A087WT02 112 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 A0A087WWC5 75 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 TRAV8-6A0A0B4J262 113 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 C9JQL5 133 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 IGLC6P0CF74 106 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 GATA1P15976 413 aaPredicted RBP3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 CTRLP40313 264 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 CAMPP49913 170 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 FOXA3P55318 350 aaPredicted RBP3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 PKIAP61925 76 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 HBBP68871 147 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 GAGE1Q13065 139 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 GAGE4Q13068 117 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 GAGE5Q13069 117 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 RNF212Q495C1 297 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 COX19Q49B96 90 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 LGALS9CQ6DKI2 356 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 ATP6V0E2Q8NHE4 81 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 FRZBQ92765 325 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 DNAJC30Q96LL9 226 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 IMMP2LQ96T52 175 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 URGCP-MRPS24S4R325 110 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 V9GYV3 84 aa3.14□□□□□ -1.91
NSMCE4A-208ENST00000477289 NBEAL2Q6ZNJ1 2754 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms