RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TMEM262E9PQX1 116 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 AKR1C8PQ5T2L2 129 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 FAM162BQ5T6X4 162 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 FAM74A4Q5TZK3 123 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 DAZ4Q86SG3 579 aaKnown RBP4.78□□□□□ -1.64
BRCA1-214ENST00000477152 NIT1Q86X76 327 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 BAALCQ8WXS3 180 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 LINC00479Q96M42 142 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 DAZ3Q9NR90 486 aaKnown RBP4.78□□□□□ -1.64
BRCA1-214ENST00000477152 ARL2-SNX15V9GYD0 113 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 RNF222A6NCQ9 220 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 H3BVH4 76 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 PEX7O00628 323 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 IGLV2-11P01706 119 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 S100A9P06702 114 aaKnown RBP4.78□□□□□ -1.64
BRCA1-214ENST00000477152 HAMPP81172 84 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 UBE2WQ96B02 151 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 SFRP2Q96HF1 295 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 KLK12Q9UKR0 248 aa4.78□□□□□ -1.64
BRCA1-214ENST00000477152 TRBV7-3A0A075B6L6 115 aa4.77□□□□□ -1.65
BRCA1-214ENST00000477152 IGKV3D-20A0A0C4DH25 116 aa4.77□□□□□ -1.65
BRCA1-214ENST00000477152 LECT2O14960 151 aa4.77□□□□□ -1.65
BRCA1-214ENST00000477152 EIF3GO75821 320 aaKnown RBP eCLIP4.77□□□□□ -1.65
BRCA1-214ENST00000477152 IGLV2-8P01709 118 aa4.77□□□□□ -1.65
BRCA1-214ENST00000477152 ARMS2P0C7Q2 107 aa4.77□□□□□ -1.65
BRCA1-214ENST00000477152 LINC00694P0DN24 101 aa4.77□□□□□ -1.65
BRCA1-214ENST00000477152 CHAC1Q9BUX1 264 aa4.77□□□□□ -1.65
BRCA1-214ENST00000477152 KRBOX1C9JBD0 128 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 RAB4BP61018 213 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 Q86TA4 180 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 SAMD10Q9BYL1 202 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 TRAV34A0A0B4J273 112 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 TRBV6-1A0A0K0K1D8 114 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 M0R381 172 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 SMIM17P0DL12 118 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 AKR1C3P42330 323 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 FHITP49789 147 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 UBE2G2P60604 165 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 SCXQ7RTU7 201 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 COX8CQ7Z4L0 72 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 C14orf178Q8N769 122 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-214ENST00000477152 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
BRCA1-214ENST00000477152 M0R036 132 aa4.75□□□□□ -1.65
BRCA1-214ENST00000477152 SH2D1AO60880 128 aa4.75□□□□□ -1.65
BRCA1-214ENST00000477152 GIPP09681 153 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-214ENST00000477152 ZNF56Q15929 161 aa4.75□□□□□ -1.65
BRCA1-214ENST00000477152 MIAQ16674 131 aa4.75□□□□□ -1.65
BRCA1-214ENST00000477152 UFSP1Q6NVU6 142 aa4.75□□□□□ -1.65
BRCA1-214ENST00000477152 ATRAIDQ6UW56 229 aa4.75□□□□□ -1.65
BRCA1-214ENST00000477152 ZNF471Q9BX82 626 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-214ENST00000477152 ALG5Q9Y673 324 aa4.75□□□□□ -1.65
BRCA1-214ENST00000477152 TRBV6-8A0A0A6YYG3 113 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 GRIFINA4D1Z8 144 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 FAM74A7A6NL05 159 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 PFDN1O60925 122 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 PTTG1O95997 202 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 ANGP03950 147 aaKnown RBP4.74□□□□□ -1.65
BRCA1-214ENST00000477152 PRSS2P07478 247 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 CXCL1P09341 107 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 VPREB1P12018 145 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 UBE2D3P61077 147 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 SNRPEP62304 92 aaKnown RBP4.74□□□□□ -1.65
BRCA1-214ENST00000477152 UBE2D2P62837 147 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 IFITM3Q01628 133 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 TWIST1Q15672 202 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 CST9LP1Q5W188 147 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 OR10G8Q8NGN5 311 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 ZC2HC1AQ96GY0 325 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 CHCHD5Q9BSY4 110 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 MAP1LC3B2A6NCE7 125 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 H7C1H1 209 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 RPL37AP61513 92 aaKnown RBP4.74□□□□□ -1.65
BRCA1-214ENST00000477152 RPL19P84098 196 aaKnown RBP4.74□□□□□ -1.65
BRCA1-214ENST00000477152 WFDC2Q14508 124 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 ZNF674Q2M3X9 581 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 SPANXN1Q5VSR9 72 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 Q75L30 129 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 MAP1LC3BQ9GZQ8 125 aa4.74□□□□□ -1.65
BRCA1-214ENST00000477152 FLG2Q5D862 2391 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-214ENST00000477152 FXYD6-FXYD2A0A087WZ82 144 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 A0A0D9SG52 128 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 RPL7L1Q6DKI1 246 aaKnown RBP4.73□□□□□ -1.65
BRCA1-214ENST00000477152 C15orf54Q8N8G6 183 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 CIRBP-AS1Q8TBR5 109 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 JPT2Q9H910 190 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 SRRM2Q9UQ35 2752 aaKnown RBP4.73□□□□□ -1.65
BRCA1-214ENST00000477152 TRBV25-1A0A075B6N4 114 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 TMSB15BA0A087X1C1 80 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-214ENST00000477152 LTAP01374 205 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 HLA-DQA1P01909 254 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 IGKV2-30P06310 120 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 GZMBP10144 247 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 DNAJC30Q96LL9 226 aa4.73□□□□□ -1.65
BRCA1-214ENST00000477152 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
BRCA1-214ENST00000477152 IGLV5-37A0A075B6J1 123 aa4.72□□□□□ -1.65
BRCA1-214ENST00000477152 TRAV8-4A0A0B4J246 113 aa4.72□□□□□ -1.65
BRCA1-214ENST00000477152 P01737 135 aa4.72□□□□□ -1.65
BRCA1-214ENST00000477152 EIF5AP63241 154 aaKnown RBP4.72□□□□□ -1.65
BRCA1-214ENST00000477152 DPH3Q96FX2 82 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms