RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 MEF2BQ02080 365 aaPredicted RBP7.38□□□□□ -1.23
PTPRN-213ENST00000476930 TOR2AQ5JU69 321 aa7.38□□□□□ -1.23
PTPRN-213ENST00000476930 SLC51BQ86UW2 128 aa7.38□□□□□ -1.23
PTPRN-213ENST00000476930 BAALCQ8WXS3 180 aa7.38□□□□□ -1.23
PTPRN-213ENST00000476930 MED9Q9NWA0 146 aa7.38□□□□□ -1.23
PTPRN-213ENST00000476930 TRBV20OR9-2A0A075B6H5 130 aa7.37□□□□□ -1.23
PTPRN-213ENST00000476930 A0A087WX48 190 aa7.37□□□□□ -1.23
PTPRN-213ENST00000476930 TRBV6-8A0A0A6YYG3 113 aa7.37□□□□□ -1.23
PTPRN-213ENST00000476930 IGLC6P0CF74 106 aa7.37□□□□□ -1.23
PTPRN-213ENST00000476930 GNG4P50150 75 aa7.37□□□□□ -1.23
PTPRN-213ENST00000476930 OR2D3Q8NGH3 330 aa7.37□□□□□ -1.23
PTPRN-213ENST00000476930 UBE2WQ96B02 151 aa7.37□□□□□ -1.23
PTPRN-213ENST00000476930 TPPP3Q9BW30 176 aa7.37□□□□□ -1.23
PTPRN-213ENST00000476930 FAM30AQ9NZY2 134 aa7.37□□□□□ -1.23
PTPRN-213ENST00000476930 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.36□□□□□ -1.23
PTPRN-213ENST00000476930 IGKV2D-24A0A075B6R9 120 aa7.36□□□□□ -1.23
PTPRN-213ENST00000476930 TMEM262E9PQX1 116 aa7.36□□□□□ -1.23
PTPRN-213ENST00000476930 PDE6DO43924 150 aa7.36□□□□□ -1.23
PTPRN-213ENST00000476930 IFNA1P01562 189 aa7.36□□□□□ -1.23
PTPRN-213ENST00000476930 BCL2P10415 239 aa7.36□□□□□ -1.23
PTPRN-213ENST00000476930 Q5VSD8 79 aa7.36□□□□□ -1.23
PTPRN-213ENST00000476930 NTM-AS1Q6ZSK4 140 aa7.36□□□□□ -1.23
PTPRN-213ENST00000476930 C9orf62Q8N4C0 152 aa7.36□□□□□ -1.23
PTPRN-213ENST00000476930 FER1L6-AS1Q8NA97 138 aa7.36□□□□□ -1.23
PTPRN-213ENST00000476930 DAZAP1Q96EP5 407 aaKnown RBP7.36□□□□□ -1.23
PTPRN-213ENST00000476930 TMEM238LA0A1B0GVL6 79 aa7.35□□□□□ -1.23
PTPRN-213ENST00000476930 SMIM17P0DL12 118 aa7.35□□□□□ -1.23
PTPRN-213ENST00000476930 RPS20P60866 119 aaKnown RBP7.35□□□□□ -1.23
PTPRN-213ENST00000476930 MPV17L2Q567V2 206 aa7.35□□□□□ -1.23
PTPRN-213ENST00000476930 AP1S3Q96PC3 154 aa7.35□□□□□ -1.23
PTPRN-213ENST00000476930 TMEM70Q9BUB7 260 aa7.35□□□□□ -1.23
PTPRN-213ENST00000476930 CHCHD7Q9BUK0 85 aa7.35□□□□□ -1.23
PTPRN-213ENST00000476930 VAX2Q9UIW0 290 aa7.35□□□□□ -1.23
PTPRN-213ENST00000476930 P01737 135 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 MGPP08493 103 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 LINC01620Q4KN68 170 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 KCNIP4Q6PIL6 250 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 ENHOQ6UWT2 76 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 AKAP14Q86UN6 197 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 C15orf54Q8N8G6 183 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 FRZBQ92765 325 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 RMI2Q96E14 147 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 SMIM12Q96EX1 92 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 COX11Q9Y6N1 276 aa7.34□□□□□ -1.23
PTPRN-213ENST00000476930 DMBT1Q9UGM3 2413 aaPredicted RBP7.34□□□□□ -1.23
PTPRN-213ENST00000476930 PKHD1L1Q86WI1 4243 aa7.34□□□□□ -1.24
PTPRN-213ENST00000476930 M0QY20 66 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 INAFM2P0DMQ5 153 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 CACNG7P62955 275 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 ELOBQ15370 118 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 SUMO4Q6EEV6 95 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 ATRAIDQ6UW56 229 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 LYZL1Q6UWQ5 148 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 Q8N976 141 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 NUDT10Q8NFP7 164 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 OCC1Q8TAD7 63 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 NUDT11Q96G61 164 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 CHCHD5Q9BSY4 110 aa7.33□□□□□ -1.24
PTPRN-213ENST00000476930 K7EN84 100 aa7.32□□□□□ -1.24
PTPRN-213ENST00000476930 ANGP03950 147 aaKnown RBP7.32□□□□□ -1.24
PTPRN-213ENST00000476930 NTF3P20783 257 aa7.32□□□□□ -1.24
PTPRN-213ENST00000476930 Q0VG73 95 aa7.32□□□□□ -1.24
PTPRN-213ENST00000476930 ALKAL2Q6UX46 152 aa7.32□□□□□ -1.24
PTPRN-213ENST00000476930 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.32□□□□□ -1.24
PTPRN-213ENST00000476930 RNASE7Q9H1E1 156 aaKnown RBP7.32□□□□□ -1.24
PTPRN-213ENST00000476930 XKRY2A2RUG3 117 aa7.31□□□□□ -1.24
PTPRN-213ENST00000476930 F2Z2F3 143 aa7.31□□□□□ -1.24
PTPRN-213ENST00000476930 TAGLN2P37802 199 aaKnown RBP7.31□□□□□ -1.24
PTPRN-213ENST00000476930 NKX2-5P52952 324 aaPredicted RBP7.31□□□□□ -1.24
PTPRN-213ENST00000476930 GAGE6Q13070 117 aa7.31□□□□□ -1.24
PTPRN-213ENST00000476930 FAT3Q8TDW7 4589 aa7.31□□□□□ -1.24
PTPRN-213ENST00000476930 DEFB104AQ8WTQ1 72 aa7.31□□□□□ -1.24
PTPRN-213ENST00000476930 BIN3Q9NQY0 253 aa7.31□□□□□ -1.24
PTPRN-213ENST00000476930 LRP1Q07954 4544 aaKnown RBP7.31□□□□□ -1.24
PTPRN-213ENST00000476930 TRBV25-1A0A075B6N4 114 aa7.3□□□□□ -1.24
PTPRN-213ENST00000476930 CRPP02741 224 aa7.3□□□□□ -1.24
PTPRN-213ENST00000476930 CTRLP40313 264 aa7.3□□□□□ -1.24
PTPRN-213ENST00000476930 RBX1P62877 108 aa7.3□□□□□ -1.24
PTPRN-213ENST00000476930 TMEM97Q5BJF2 176 aa7.3□□□□□ -1.24
PTPRN-213ENST00000476930 CLPSL2Q6UWE3 100 aa7.3□□□□□ -1.24
PTPRN-213ENST00000476930 Q6ZSA8 131 aa7.3□□□□□ -1.24
PTPRN-213ENST00000476930 C1orf43Q9BWL3 253 aa7.3□□□□□ -1.24
PTPRN-213ENST00000476930 DPH3P1Q9H4G8 78 aa7.3□□□□□ -1.24
PTPRN-213ENST00000476930 RPP21Q9H633 154 aaKnown RBP7.3□□□□□ -1.24
PTPRN-213ENST00000476930 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
PTPRN-213ENST00000476930 H7C1H1 209 aa7.29□□□□□ -1.24
PTPRN-213ENST00000476930 TRGC1P0CF51 173 aa7.29□□□□□ -1.24
PTPRN-213ENST00000476930 TWIST1Q15672 202 aa7.29□□□□□ -1.24
PTPRN-213ENST00000476930 IQCJQ1A5X6 159 aa7.29□□□□□ -1.24
PTPRN-213ENST00000476930 RASL11AQ6T310 242 aa7.29□□□□□ -1.24
PTPRN-213ENST00000476930 LINC00269Q8N2A0 174 aa7.29□□□□□ -1.24
PTPRN-213ENST00000476930 LYPD6BQ8NI32 183 aa7.29□□□□□ -1.24
PTPRN-213ENST00000476930 GTSF1Q8WW33 167 aa7.29□□□□□ -1.24
PTPRN-213ENST00000476930 IGHV1-24A0A0C4DH33 117 aa7.28□□□□□ -1.24
PTPRN-213ENST00000476930 PKIAP61925 76 aa7.28□□□□□ -1.24
PTPRN-213ENST00000476930 BLOC1S1P78537 153 aa7.28□□□□□ -1.24
PTPRN-213ENST00000476930 MIAQ16674 131 aa7.28□□□□□ -1.24
PTPRN-213ENST00000476930 WDR73Q6P4I2 378 aa7.28□□□□□ -1.24
PTPRN-213ENST00000476930 KRTAP26-1Q6PEX3 210 aa7.28□□□□□ -1.24
PTPRN-213ENST00000476930 CNFNQ9BYD5 112 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms