RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 CKS2P33552 79 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 RNASE4P34096 147 aaKnown RBP2.48□□□□□ -2.01
ITGA4-208ENST00000476824 FUSP35637 526 aaKnown RBP eCLIP2.48□□□□□ -2.01
ITGA4-208ENST00000476824 UBE2G1P62253 170 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 HIST1H4AP62805 103 aaKnown RBP2.48□□□□□ -2.01
ITGA4-208ENST00000476824 RPL18Q07020 188 aaKnown RBP2.48□□□□□ -2.01
ITGA4-208ENST00000476824 CIRBPQ14011 172 aaKnown RBP2.48□□□□□ -2.01
ITGA4-208ENST00000476824 ASB16-AS1Q495Z4 193 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 PDPNQ86YL7 162 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 ZNF525Q8N782 197 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 ZNF645Q8N7E2 425 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 NPBQ8NG41 125 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 LINC00597Q9H2U6 94 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 NXT2Q9NPJ8 142 aaKnown RBP2.48□□□□□ -2.01
ITGA4-208ENST00000476824 ADGRG4Q8IZF6 3080 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 PTPRBP23467 1997 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 EML6Q6ZMW3 1958 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 CRYBG3Q68DQ2 2970 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 AHCTF1Q8WYP5 2266 aa2.48□□□□□ -2.01
ITGA4-208ENST00000476824 TDRD6O60522 2096 aaKnown RBP2.48□□□□□ -2.01
ITGA4-208ENST00000476824 MTORP42345 2549 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 PDZD2O15018 2839 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 PI4KAP42356 2102 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 CCL16O15467 120 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 CCKP06307 115 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 SAA1P0DJI8 122 aaPredicted RBP2.47□□□□□ -2.01
ITGA4-208ENST00000476824 CD28P10747 220 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 PIPP12273 146 aaPredicted RBP2.47□□□□□ -2.01
ITGA4-208ENST00000476824 SMIM11AP58511 58 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 C9orf129Q5T035 196 aaKnown RBP2.47□□□□□ -2.01
ITGA4-208ENST00000476824 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.47□□□□□ -2.01
ITGA4-208ENST00000476824 CFAP126Q5VTH2 177 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 LYPD2Q6UXB3 125 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 Q6ZQT7 251 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 FAM216BQ8N7L0 139 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 Q8N8P6 123 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 DAND5Q8N907 189 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 ITLN2Q8WWU7 325 aaPredicted RBP2.47□□□□□ -2.01
ITGA4-208ENST00000476824 CYYR1Q96J86 154 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 LINC00167Q96N53 147 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 SMIM14Q96QK8 99 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 OR8B2Q96RD0 313 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 UPK3BQ9BT76 320 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 SCRT1Q9BWW7 348 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 CXCL16Q9H2A7 254 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 XAGE1AQ9HD64 81 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 CELSR2Q9HCU4 2923 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 COL5A1P20908 1838 aaPredicted RBP2.47□□□□□ -2.01
ITGA4-208ENST00000476824 TNRC6BQ9UPQ9 1833 aaKnown RBP2.47□□□□□ -2.01
ITGA4-208ENST00000476824 SCN8AQ9UQD0 1980 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 POLEQ07864 2286 aa2.47□□□□□ -2.01
ITGA4-208ENST00000476824 IGHV3-74A0A0B4J1X5 117 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 IBA57-AS1B1ANH7 110 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 E7EQL1 145 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 BCE1O60756 84 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 ASAH2BP0C7U1 165 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 CXCL8P10145 99 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 COX8AP10176 69 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 ZNF32P17041 273 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 KRTAP10-8P60410 259 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 BSPH1Q075Z2 132 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 SS18Q15532 418 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 MIR17HGQ75NE6 70 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 AQP3Q92482 292 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 MANBALQ9NQG1 85 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 ZNF469Q96JG9 3925 aaPredicted RBP2.46□□□□□ -2.02
ITGA4-208ENST00000476824 NAV3Q8IVL0 2385 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 PTPRDP23468 1912 aa2.46□□□□□ -2.02
ITGA4-208ENST00000476824 PDCD11Q14690 1871 aaKnown RBP2.45□□□□□ -2.02
ITGA4-208ENST00000476824 KIAA1549LQ6ZVL6 1849 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 ANAPC1Q9H1A4 1944 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 TRAV14DV4A0A0A6YYC5 116 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 F2Z2F3 143 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 J3QLW9 94 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 LEPROTO15243 131 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 NUPR1O60356 82 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 P0C879 139 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 TMEM170BQ5T4T1 132 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 LINC00643Q86TS7 51 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 BAGE3Q86Y29 109 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 BAGE2Q86Y30 109 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 TMEM256Q8N2U0 113 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 TOMM5Q8N4H5 51 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 RNASE6Q93091 150 aaKnown RBP2.45□□□□□ -2.02
ITGA4-208ENST00000476824 ODF3Q96PU9 254 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 HIGD1BQ9P298 99 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 TRAPPC1Q9Y5R8 145 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 MUC22E2RYF6 1773 aaPredicted RBP2.45□□□□□ -2.02
ITGA4-208ENST00000476824 NBASA2RRP1 2371 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 F8P00451 2351 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 KNTC1P50748 2209 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 PCNX1Q96RV3 2341 aa2.45□□□□□ -2.02
ITGA4-208ENST00000476824 SPG11Q96JI7 2443 aa2.44□□□□□ -2.02
ITGA4-208ENST00000476824 ICE1Q9Y2F5 2266 aa2.44□□□□□ -2.02
ITGA4-208ENST00000476824 MYO16Q9Y6X6 1858 aa2.44□□□□□ -2.02
ITGA4-208ENST00000476824 GOLGA4Q13439 2230 aaKnown RBP2.44□□□□□ -2.02
ITGA4-208ENST00000476824 TRBV6-7A0A0A0MS04 114 aa2.44□□□□□ -2.02
ITGA4-208ENST00000476824 SERF1AO75920 110 aa2.44□□□□□ -2.02
ITGA4-208ENST00000476824 IGKV1-39P01597 117 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms