RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 M0R381 172 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 PHOX2AO14813 284 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 PPP1R17O96001 155 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 HTN1P15515 57 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 C12orf74Q32Q52 190 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 ZNF876PQ49A33 203 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 FAM104BQ5XKR9 115 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 C11orf72Q8NBR9 251 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 RNASE8Q8TDE3 154 aaKnown RBP4.51□□□□□ -1.69
CLDN4-205ENST00000476494 RASL10AQ92737 203 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 DPH3P1Q9H4G8 78 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 LAMTOR2Q9Y2Q5 125 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 TIMM8BQ9Y5J9 83 aaPredicted RBP4.51□□□□□ -1.69
CLDN4-205ENST00000476494 MUC21A0A0G2JKD1 596 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 NBDYA0A0U1RRE5 68 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 MUC21A0A140T8X8 626 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 RHODO00212 210 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 OXTP01178 125 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 S100A6P06703 90 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 MIFP14174 115 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 RAB4AP20338 218 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 FUSP35637 526 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLDN4-205ENST00000476494 Q0VG73 95 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 ORMDL3Q8N138 153 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 MRAP2Q96G30 205 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 GSN-AS1Q9NRJ2 163 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 MSRB1Q9NZV6 116 aa4.5□□□□□ -1.69
CLDN4-205ENST00000476494 TEX48A0A1B0GUV7 120 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 LYRM9A8MSI8 78 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST1H2BKO60814 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST1H2BJP06899 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 AZU1P20160 251 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 EVI2AP22794 236 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST1H2BOP23527 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 CKS2P33552 79 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST1H2BBP33778 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST1H2BDP58876 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 SSTP61278 116 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST1H2BCP62807 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 SLAQ13239 276 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST2H2BEQ16778 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 MRPL51Q4U2R6 128 aaKnown RBP4.49□□□□□ -1.69
CLDN4-205ENST00000476494 OR10J3Q5JRS4 329 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.49□□□□□ -1.69
CLDN4-205ENST00000476494 ZFP2Q6ZN57 461 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 C14orf178Q8N769 122 aaPredicted RBP4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST1H2BHQ93079 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST1H2BNQ99877 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 HIST1H2BMQ99879 126 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 ALKBH7Q9BT30 221 aaPredicted RBP4.49□□□□□ -1.69
CLDN4-205ENST00000476494 CELA1Q9UNI1 258 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 KIF25-AS1Q9Y6Z4 181 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 DNAH8Q96JB1 4490 aa4.49□□□□□ -1.69
CLDN4-205ENST00000476494 IGHV4-28A0A0C4DH34 117 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 H7C1H1 209 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 RS1O15537 224 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 CRYGDP07320 174 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 SRIP30626 198 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 LINC00315P59091 139 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 COA6Q5JTJ3 125 aaKnown RBP4.48□□□□□ -1.69
CLDN4-205ENST00000476494 UBE2DNLQ8IWF7 75 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 AMN1Q8IY45 258 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 ZNRF2Q8NHG8 242 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 DEFB104AQ8WTQ1 72 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 RNF185Q96GF1 192 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 PGPEP1Q9NXJ5 209 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 X6R8D5 127 aa4.48□□□□□ -1.69
CLDN4-205ENST00000476494 TRGV1A0A0A0MS02 117 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 TRAV4A0A0B4J268 109 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 PLAC8L1A1L4L8 177 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 PRSS47A8MTI9 375 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 D6R8Y8 96 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 F5H697 171 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 K7EMI3 77 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
CLDN4-205ENST00000476494 HAMPP81172 84 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 KIAA1644Q3SXP7 199 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 LELP1Q5T871 98 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
CLDN4-205ENST00000476494 CFAP126Q5VTH2 177 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 BAGE3Q86Y29 109 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 LINC00612Q8N6U2 182 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 OR4C5Q8NGB2 326 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 PRELID3AQ96N28 172 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 C20orf78Q9BR46 151 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 KRTAP1-5Q9BYS1 174 aa4.47□□□□□ -1.69
CLDN4-205ENST00000476494 NOP10Q9NPE3 64 aaKnown RBP4.47□□□□□ -1.69
CLDN4-205ENST00000476494 TMA7Q9Y2S6 64 aaKnown RBP4.47□□□□□ -1.69
CLDN4-205ENST00000476494 TRGV2A0A075B6R0 118 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 A0A087WWL8 130 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 TRBV6-5A0A0K0K1A5 114 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 TCAPO15273 167 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 PRM2P04554 102 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 MGPP08493 103 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 SPART-AS1P0CW21 52 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 PMCHP20382 165 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 NDUFA6P56556 154 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms