RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 UBE2D2P62837 147 aa8.03□□□□□ -1.12
TTC38-206ENST00000475467 RPL19P84098 196 aaKnown RBP8.03□□□□□ -1.12
TTC38-206ENST00000475467 LINC01620Q4KN68 170 aa8.03□□□□□ -1.12
TTC38-206ENST00000475467 BAGE2Q86Y30 109 aa8.03□□□□□ -1.12
TTC38-206ENST00000475467 CLRN3Q8NCR9 226 aa8.03□□□□□ -1.12
TTC38-206ENST00000475467 MANBALQ9NQG1 85 aa8.03□□□□□ -1.12
TTC38-206ENST00000475467 GNG13Q9P2W3 67 aa8.03□□□□□ -1.12
TTC38-206ENST00000475467 TRAV1-1A0A0B4J248 108 aa8.02□□□□□ -1.13
TTC38-206ENST00000475467 RAB4BP61018 213 aa8.02□□□□□ -1.13
TTC38-206ENST00000475467 CCL20P78556 96 aa8.02□□□□□ -1.13
TTC38-206ENST00000475467 ZNF674Q2M3X9 581 aa8.02□□□□□ -1.13
TTC38-206ENST00000475467 LINC01559Q495D7 138 aa8.02□□□□□ -1.13
TTC38-206ENST00000475467 Q6ZRU5 148 aa8.02□□□□□ -1.13
TTC38-206ENST00000475467 C9orf163Q8N9P6 203 aa8.02□□□□□ -1.13
TTC38-206ENST00000475467 JPT2Q9H910 190 aa8.02□□□□□ -1.13
TTC38-206ENST00000475467 IFNA1P01562 189 aa8.01□□□□□ -1.13
TTC38-206ENST00000475467 Q9UF83 564 aa8.01□□□□□ -1.13
TTC38-206ENST00000475467 ANGP03950 147 aaKnown RBP8□□□□□ -1.13
TTC38-206ENST00000475467 CXCL1P09341 107 aa8□□□□□ -1.13
TTC38-206ENST00000475467 ENHOQ6UWT2 76 aa8□□□□□ -1.13
TTC38-206ENST00000475467 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
TTC38-206ENST00000475467 A0A087WWL8 130 aa7.99□□□□□ -1.13
TTC38-206ENST00000475467 M0R381 172 aa7.99□□□□□ -1.13
TTC38-206ENST00000475467 PRR27Q6MZM9 219 aa7.99□□□□□ -1.13
TTC38-206ENST00000475467 USP17L23D6RBM5 183 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 GZMBP10144 247 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 RPL35P42766 123 aaKnown RBP7.98□□□□□ -1.13
TTC38-206ENST00000475467 C9orf62Q8N4C0 152 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 C15orf54Q8N8G6 183 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 RNF185Q96GF1 192 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 DNAJC30Q96LL9 226 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 CHCHD5Q9BSY4 110 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 MLST8Q9BVC4 326 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 PRR34Q9NV39 138 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 VAX2Q9UIW0 290 aa7.98□□□□□ -1.13
TTC38-206ENST00000475467 TRAV8-4A0A0B4J246 113 aa7.97□□□□□ -1.13
TTC38-206ENST00000475467 P01737 135 aa7.97□□□□□ -1.13
TTC38-206ENST00000475467 MEF2BQ02080 365 aaPredicted RBP7.97□□□□□ -1.13
TTC38-206ENST00000475467 C11orf52Q96A22 123 aa7.97□□□□□ -1.13
TTC38-206ENST00000475467 DAZAP1Q96EP5 407 aaKnown RBP7.97□□□□□ -1.13
TTC38-206ENST00000475467 MED9Q9NWA0 146 aa7.97□□□□□ -1.13
TTC38-206ENST00000475467 TRBV25-1A0A075B6N4 114 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.96□□□□□ -1.14
TTC38-206ENST00000475467 PDE6DO43924 150 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 HLA-DQA1P01909 254 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 PRSS1P07477 247 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 BCL2P10415 239 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 TAGLN2P37802 199 aaKnown RBP7.96□□□□□ -1.14
TTC38-206ENST00000475467 CNBPP62633 177 aaKnown RBP7.96□□□□□ -1.14
TTC38-206ENST00000475467 BLOC1S1P78537 153 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 ZNF56Q15929 161 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 MPV17L2Q567V2 206 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 DERL1Q9BUN8 251 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.14
TTC38-206ENST00000475467 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.14
TTC38-206ENST00000475467 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
TTC38-206ENST00000475467 RAB19A4D1S5 217 aa7.95□□□□□ -1.14
TTC38-206ENST00000475467 OR5AL1P0C617 328 aa7.95□□□□□ -1.14
TTC38-206ENST00000475467 SMIM17P0DL12 118 aa7.95□□□□□ -1.14
TTC38-206ENST00000475467 GNG4P50150 75 aa7.95□□□□□ -1.14
TTC38-206ENST00000475467 CIRBPQ14011 172 aaKnown RBP7.95□□□□□ -1.14
TTC38-206ENST00000475467 CENPWQ5EE01 88 aa7.95□□□□□ -1.14
TTC38-206ENST00000475467 ALKAL2Q6UX46 152 aa7.95□□□□□ -1.14
TTC38-206ENST00000475467 SDIM1Q6ZPB5 146 aa7.95□□□□□ -1.14
TTC38-206ENST00000475467 AP5S1Q9NUS5 200 aa7.95□□□□□ -1.14
TTC38-206ENST00000475467 H7C1H1 209 aa7.94□□□□□ -1.14
TTC38-206ENST00000475467 SNAI2O43623 268 aa7.94□□□□□ -1.14
TTC38-206ENST00000475467 SPANXN1Q5VSR9 72 aa7.94□□□□□ -1.14
TTC38-206ENST00000475467 MUC21A0A0G2JKD1 596 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 MUC21A0A140T8X8 626 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 A0A1B0GUV1 79 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 A0A1B0GVG6 124 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 F5H697 171 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 SSTP61278 116 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 RBX1P62877 108 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 IQCJQ1A5X6 159 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 OR10AG1Q8NH19 301 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 BIN3Q9NQY0 253 aa7.93□□□□□ -1.14
TTC38-206ENST00000475467 NKX2-5P52952 324 aaPredicted RBP7.92□□□□□ -1.14
TTC38-206ENST00000475467 RPS20P60866 119 aaKnown RBP7.92□□□□□ -1.14
TTC38-206ENST00000475467 LINC00269Q8N2A0 174 aa7.92□□□□□ -1.14
TTC38-206ENST00000475467 OR2D3Q8NGH3 330 aa7.92□□□□□ -1.14
TTC38-206ENST00000475467 AP1S3Q96PC3 154 aa7.92□□□□□ -1.14
TTC38-206ENST00000475467 IGHV3-64A0A075B6Q5 118 aa7.91□□□□□ -1.14
TTC38-206ENST00000475467 IGHV1-24A0A0C4DH33 117 aa7.91□□□□□ -1.14
TTC38-206ENST00000475467 XKRY2A2RUG3 117 aa7.91□□□□□ -1.14
TTC38-206ENST00000475467 REG3AQ06141 175 aa7.91□□□□□ -1.14
TTC38-206ENST00000475467 DPH3Q96FX2 82 aa7.91□□□□□ -1.14
TTC38-206ENST00000475467 TPPP3Q9BW30 176 aa7.91□□□□□ -1.14
TTC38-206ENST00000475467 DPH3P1Q9H4G8 78 aa7.91□□□□□ -1.14
TTC38-206ENST00000475467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
TTC38-206ENST00000475467 MT1HL1P0DM35 61 aa7.9□□□□□ -1.14
TTC38-206ENST00000475467 HNRNPA3P51991 378 aaKnown RBP7.9□□□□□ -1.14
TTC38-206ENST00000475467 CFAP161Q6P656 301 aa7.9□□□□□ -1.14
TTC38-206ENST00000475467 KRTAP26-1Q6PEX3 210 aa7.9□□□□□ -1.14
TTC38-206ENST00000475467 NTM-AS1Q6ZSK4 140 aa7.9□□□□□ -1.14
TTC38-206ENST00000475467 FER1L6-AS1Q8NA97 138 aa7.9□□□□□ -1.14
TTC38-206ENST00000475467 C7orf33Q8WU49 177 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms