RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 GAGE4Q13068 117 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 GAGE5Q13069 117 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 ZNF56Q15929 161 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 GAGE13Q4V321 117 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 ATRAIDQ6UW56 229 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 NEGR1Q7Z3B1 354 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 GATD1Q8NB37 220 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 ZNRF2Q8NHG8 242 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 PRADC1Q9BSG0 188 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 TMEM191AQ9H0A3 160 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 DPH3P1Q9H4G8 78 aa4.78□□□□□ -1.64
LIMD1-204ENST00000474665 A0A087WWC5 75 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 TRBV10-1A0A0K0K1A3 114 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 PRSS29PA6NIE9 313 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 F5H697 171 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 APOC3P02656 99 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 MGPP08493 103 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 RAB4AP20338 218 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 SRIP30626 198 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 RPS10P46783 165 aaKnown RBP4.77□□□□□ -1.65
LIMD1-204ENST00000474665 CAMPP49913 170 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 TIRAPP58753 221 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 UBE2D3P61077 147 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 UBE2D2P62837 147 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 RIGQ13278 110 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 MRPL54Q6P161 138 aaKnown RBP4.77□□□□□ -1.65
LIMD1-204ENST00000474665 AMN1Q8IY45 258 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 RPL39LQ96EH5 51 aaKnown RBP4.77□□□□□ -1.65
LIMD1-204ENST00000474665 KRTAP1-5Q9BYS1 174 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 CTDSP1Q9GZU7 261 aa4.77□□□□□ -1.65
LIMD1-204ENST00000474665 MRPS16Q9Y3D3 137 aaKnown RBP4.77□□□□□ -1.65
LIMD1-204ENST00000474665 TRBV7-3A0A075B6L6 115 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 SMKR1H3BMG3 65 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 SMIM17P0DL12 118 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 RHEBQ15382 184 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 FAM104BQ5XKR9 115 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 Q6ZR54 194 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 NTM-AS1Q6ZSK4 140 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 Q8N3U1 123 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 NRACQ8N912 160 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 ATP6V0E2Q8NHE4 81 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 IMMP2LQ96T52 175 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 UPK3BQ9BT76 320 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 GTSF1LQ9H1H1 148 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 TMEM242Q9NWH2 141 aa4.76□□□□□ -1.65
LIMD1-204ENST00000474665 IGHV3-38A0A0C4DH36 116 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 CCL18P55774 89 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 HBBP68871 147 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 MRPL51Q4U2R6 128 aaKnown RBP4.75□□□□□ -1.65
LIMD1-204ENST00000474665 RASL11AQ6T310 242 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 SH2D6Q7Z4S9 175 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 ATP5L2Q7Z4Y8 100 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 WFDC10BQ8IUB3 73 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 DEFB104AQ8WTQ1 72 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 BORCS7Q96B45 105 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 YPEL4Q96NS1 127 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 Q9H8V8 135 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 RPS10P5Q9NQ39 176 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 NIT2Q9NQR4 276 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 URGCP-MRPS24S4R325 110 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 PKD1P98161 4303 aa4.75□□□□□ -1.65
LIMD1-204ENST00000474665 IGLV2-18A0A075B6J9 118 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 A0A1B0GW15 77 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 CDK2AP2O75956 126 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 NCR2O95944 276 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 INAFM2P0DMQ5 153 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 RPL36AP83881 106 aaKnown RBP4.74□□□□□ -1.65
LIMD1-204ENST00000474665 NDUFA5Q16718 116 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 TMEM136Q6ZRR5 245 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 UBE2DNLQ8IWF7 75 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 SVBPQ8N300 66 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 RPL36ALQ969Q0 106 aaKnown RBP4.74□□□□□ -1.65
LIMD1-204ENST00000474665 BTF3L4Q96K17 158 aa4.74□□□□□ -1.65
LIMD1-204ENST00000474665 TGIF2-C20orf24A0A0A6YYL0 155 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 TRBV6-5A0A0K0K1A5 114 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 H7C1H1 209 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 M0R2N4 97 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 RTL8CO15255 209 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 SNAPINO95295 136 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 DNAH10OSP0CZ25 163 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 POLR2KP53803 58 aaKnown RBP4.73□□□□□ -1.65
LIMD1-204ENST00000474665 ELOBQ15370 118 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 LELP1Q5T871 98 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 SMIM15Q7Z3B0 74 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 FRZBQ92765 325 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 MRAP2Q96G30 205 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 DNAJC30Q96LL9 226 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 TNFRSF18Q9Y5U5 241 aa4.73□□□□□ -1.65
LIMD1-204ENST00000474665 APOBP04114 4563 aaKnown RBP4.72□□□□□ -1.65
LIMD1-204ENST00000474665 TRBV24-1A0A075B6N3 115 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 TRAV9-1A0A075B6T8 112 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 TRBV6-8A0A0A6YYG3 113 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 NBDYA0A0U1RRE5 68 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 SDHAF1A6NFY7 115 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 D6R8Y8 96 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 SIVA1O15304 175 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 NPYP01303 97 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 OR10J3Q5JRS4 329 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 DAZ4Q86SG3 579 aaKnown RBP4.72□□□□□ -1.65
LIMD1-204ENST00000474665 CBLN2Q8IUK8 224 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms