RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 MRPL54Q6P161 138 aaKnown RBP10.8□□□□□ -0.68
COL1A1-204ENST00000474644 RASL11AQ6T310 242 aa10.8□□□□□ -0.68
COL1A1-204ENST00000474644 GTSF1LQ9H1H1 148 aa10.8□□□□□ -0.68
COL1A1-204ENST00000474644 A0A1B0GW15 77 aa10.79□□□□□ -0.68
COL1A1-204ENST00000474644 A0A1B0GXF2 115 aa10.79□□□□□ -0.68
COL1A1-204ENST00000474644 CAMPP49913 170 aa10.79□□□□□ -0.68
COL1A1-204ENST00000474644 HBBP68871 147 aa10.79□□□□□ -0.68
COL1A1-204ENST00000474644 GATD1Q8NB37 220 aa10.79□□□□□ -0.68
COL1A1-204ENST00000474644 CTDSP1Q9GZU7 261 aa10.79□□□□□ -0.68
COL1A1-204ENST00000474644 ATP5L2Q7Z4Y8 100 aa10.78□□□□□ -0.68
COL1A1-204ENST00000474644 WFDC10BQ8IUB3 73 aa10.78□□□□□ -0.68
COL1A1-204ENST00000474644 AMN1Q8IY45 258 aa10.78□□□□□ -0.68
COL1A1-204ENST00000474644 CLRN3Q8NCR9 226 aa10.78□□□□□ -0.68
COL1A1-204ENST00000474644 RNF185Q96GF1 192 aa10.78□□□□□ -0.68
COL1A1-204ENST00000474644 DNAJC30Q96LL9 226 aa10.78□□□□□ -0.68
COL1A1-204ENST00000474644 Q9H8V8 135 aa10.78□□□□□ -0.68
COL1A1-204ENST00000474644 C7orf77A4D0Y5 90 aa10.77□□□□□ -0.69
COL1A1-204ENST00000474644 APOC3P02656 99 aa10.77□□□□□ -0.69
COL1A1-204ENST00000474644 RHEBQ15382 184 aa10.77□□□□□ -0.69
COL1A1-204ENST00000474644 LELP1Q5T871 98 aa10.77□□□□□ -0.69
COL1A1-204ENST00000474644 IMMP2LQ96T52 175 aa10.77□□□□□ -0.69
COL1A1-204ENST00000474644 NIT2Q9NQR4 276 aa10.77□□□□□ -0.69
COL1A1-204ENST00000474644 TNFRSF18Q9Y5U5 241 aa10.77□□□□□ -0.69
COL1A1-204ENST00000474644 BIRC6Q9NR09 4857 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 A0A087WWC5 75 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 NBDYA0A0U1RRE5 68 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 M0R2N4 97 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 SIVA1O15304 175 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 S100A8P05109 93 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 RAB4AP20338 218 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 NDUFA5Q16718 116 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 Q6ZR54 194 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 SLC7A5P1Q8MH63 180 aa10.76□□□□□ -0.69
COL1A1-204ENST00000474644 RPL39LQ96EH5 51 aaKnown RBP10.76□□□□□ -0.69
COL1A1-204ENST00000474644 OR10J3Q5JRS4 329 aa10.75□□□□□ -0.69
COL1A1-204ENST00000474644 KCNIP4Q6PIL6 250 aa10.75□□□□□ -0.69
COL1A1-204ENST00000474644 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
COL1A1-204ENST00000474644 FRZBQ92765 325 aa10.75□□□□□ -0.69
COL1A1-204ENST00000474644 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
COL1A1-204ENST00000474644 TMEM242Q9NWH2 141 aa10.75□□□□□ -0.69
COL1A1-204ENST00000474644 TRAV8-6A0A0B4J262 113 aa10.74□□□□□ -0.69
COL1A1-204ENST00000474644 GAS8-AS1O95177 125 aa10.74□□□□□ -0.69
COL1A1-204ENST00000474644 FAM104BQ5XKR9 115 aa10.74□□□□□ -0.69
COL1A1-204ENST00000474644 SVBPQ8N300 66 aa10.74□□□□□ -0.69
COL1A1-204ENST00000474644 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-204ENST00000474644 MRAP2Q96G30 205 aa10.74□□□□□ -0.69
COL1A1-204ENST00000474644 BTF3L4Q96K17 158 aa10.74□□□□□ -0.69
COL1A1-204ENST00000474644 KRTAP1-5Q9BYS1 174 aa10.74□□□□□ -0.69
COL1A1-204ENST00000474644 RPS10P5Q9NQ39 176 aa10.74□□□□□ -0.69
COL1A1-204ENST00000474644 NCR2O95944 276 aa10.73□□□□□ -0.69
COL1A1-204ENST00000474644 TTC32Q5I0X7 151 aa10.73□□□□□ -0.69
COL1A1-204ENST00000474644 SMKR1H3BMG3 65 aa10.72□□□□□ -0.69
COL1A1-204ENST00000474644 SNAPINO95295 136 aa10.72□□□□□ -0.69
COL1A1-204ENST00000474644 DNAH10OSP0CZ25 163 aa10.72□□□□□ -0.69
COL1A1-204ENST00000474644 RPS10P46783 165 aaKnown RBP10.72□□□□□ -0.69
COL1A1-204ENST00000474644 MRPL51Q4U2R6 128 aaKnown RBP10.72□□□□□ -0.69
COL1A1-204ENST00000474644 TRAV9-1A0A075B6T8 112 aa10.71□□□□□ -0.69
COL1A1-204ENST00000474644 TRBV6-8A0A0A6YYG3 113 aa10.71□□□□□ -0.69
COL1A1-204ENST00000474644 TRBV6-5A0A0K0K1A5 114 aa10.71□□□□□ -0.69
COL1A1-204ENST00000474644 S100PP25815 95 aa10.71□□□□□ -0.69
COL1A1-204ENST00000474644 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
COL1A1-204ENST00000474644 URGCP-MRPS24S4R325 110 aa10.71□□□□□ -0.69
COL1A1-204ENST00000474644 DNAH2Q9P225 4427 aa10.7□□□□□ -0.7
COL1A1-204ENST00000474644 TMEM97Q5BJF2 176 aa10.7□□□□□ -0.7
COL1A1-204ENST00000474644 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
COL1A1-204ENST00000474644 SDHAF1A6NFY7 115 aa10.69□□□□□ -0.7
COL1A1-204ENST00000474644 NRACQ8N912 160 aa10.69□□□□□ -0.7
COL1A1-204ENST00000474644 ST20Q9HBF5 79 aa10.69□□□□□ -0.7
COL1A1-204ENST00000474644 D6R8Y8 96 aa10.68□□□□□ -0.7
COL1A1-204ENST00000474644 CKS2P33552 79 aa10.68□□□□□ -0.7
COL1A1-204ENST00000474644 NIT1Q86X76 327 aa10.68□□□□□ -0.7
COL1A1-204ENST00000474644 Q8N3U1 123 aa10.68□□□□□ -0.7
COL1A1-204ENST00000474644 DEFB104AQ8WTQ1 72 aa10.68□□□□□ -0.7
COL1A1-204ENST00000474644 TRBV25-1A0A075B6N4 114 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 IGHV1-24A0A0C4DH33 117 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 PPP1R17O96001 155 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 IGHV3-30P01768 117 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 IGHV3-33P01772 117 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 IGHV3-30-3P0DP02 117 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 IGHV3-30-5P0DP03 117 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 COTL1Q14019 142 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 IQCJQ1A5X6 159 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 TMEM136Q6ZRR5 245 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 TMEM70Q9BUB7 260 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 FRAS1Q86XX4 4008 aa10.67□□□□□ -0.7
COL1A1-204ENST00000474644 DNAH10Q8IVF4 4471 aa10.66□□□□□ -0.7
COL1A1-204ENST00000474644 TRAV9-2A0A087WT02 112 aa10.66□□□□□ -0.7
COL1A1-204ENST00000474644 K7EP13 123 aa10.66□□□□□ -0.7
COL1A1-204ENST00000474644 C1orf134Q5TEV5 83 aa10.66□□□□□ -0.7
COL1A1-204ENST00000474644 ATRAIDQ6UW56 229 aa10.66□□□□□ -0.7
COL1A1-204ENST00000474644 CHCHD5Q9BSY4 110 aa10.66□□□□□ -0.7
COL1A1-204ENST00000474644 I3L3M4 83 aa10.65□□□□□ -0.7
COL1A1-204ENST00000474644 PPBPP02775 128 aa10.65□□□□□ -0.7
COL1A1-204ENST00000474644 POLR2KP53803 58 aaKnown RBP10.65□□□□□ -0.7
COL1A1-204ENST00000474644 SUMO2P61956 95 aaKnown RBP10.65□□□□□ -0.7
COL1A1-204ENST00000474644 C6orf223Q8N319 242 aa10.65□□□□□ -0.7
COL1A1-204ENST00000474644 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
COL1A1-204ENST00000474644 TRBV24-1A0A075B6N3 115 aa10.64□□□□□ -0.71
COL1A1-204ENST00000474644 TRBV27A0A0K0K1C4 114 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms