RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 SLC50A1Q9BRV3 221 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 HES7Q9BYE0 225 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 SDK2Q58EX2 2172 aa5.46□□□□□ -1.53
GPNMB-209ENST00000474157 LOC389332A0A1B0GUA5 103 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 C4orf51C9J302 202 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 DEFA4P12838 97 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 MAGEA5P43359 124 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 CRIP2P52943 208 aaPredicted RBP5.46□□□□□ -1.54
GPNMB-209ENST00000474157 IGLV3-21P80748 117 aaPredicted RBP5.46□□□□□ -1.54
GPNMB-209ENST00000474157 LAGE3Q14657 143 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 PIGYQ3MUY2 71 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 MRPL51Q4U2R6 128 aaKnown RBP5.46□□□□□ -1.54
GPNMB-209ENST00000474157 C10orf25Q5T742 122 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 COX14Q96I36 57 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 FAM167A-AS1Q96KT0 104 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 TIMM21Q9BVV7 248 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 TTTY13Q9BZ97 58 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 DEFB127Q9H1M4 99 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 FER1L5A0AVI2 2057 aa5.46□□□□□ -1.54
GPNMB-209ENST00000474157 A0A0J9YX75 114 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 IGHV5-10-1A0A0J9YXX1 117 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 OVOL3O00110 214 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 WNT9BO14905 357 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 CCKP06307 115 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 ZNF22P17026 224 aaPredicted RBP5.45□□□□□ -1.54
GPNMB-209ENST00000474157 ITLN1Q8WWA0 313 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 MRPL53Q96EL3 112 aaKnown RBP5.45□□□□□ -1.54
GPNMB-209ENST00000474157 ZNF799Q96GE5 643 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 TM2D3Q9BRN9 247 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 MAP6D1Q9H9H5 199 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 PHPT1Q9NRX4 125 aaPredicted RBP5.45□□□□□ -1.54
GPNMB-209ENST00000474157 NBEAL1Q6ZS30 2694 aa5.45□□□□□ -1.54
GPNMB-209ENST00000474157 TRAV7A0A075B6U4 112 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 IGKV1-12A0A0C4DH73 117 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 TMEM223A0PJW6 202 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 SDHAF1A6NFY7 115 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 IQCF6A8MYZ5 107 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 IBA57-AS1B1ANH7 110 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 NXPH4O95158 308 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 IGKV1D-12P01611 117 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 ARMS2P0C7Q2 107 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 RNASE2P10153 161 aaKnown RBP5.44□□□□□ -1.54
GPNMB-209ENST00000474157 SAA4P35542 130 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 XCL1P47992 114 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 MORN5Q5VZ52 161 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 COX8CQ7Z4L0 72 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 LYPD1Q8N2G4 141 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 PHF3Q92576 2039 aaKnown RBP5.44□□□□□ -1.54
GPNMB-209ENST00000474157 XCL2Q9UBD3 114 aa5.44□□□□□ -1.54
GPNMB-209ENST00000474157 IGKV1-27A0A075B6S5 117 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 TRBV27A0A0K0K1C4 114 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 TIMM17BO60830 172 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 CD24P25063 80 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 RHOHQ15669 191 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 Q1RN00 199 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 C10orf128Q5T292 105 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 ZNF826PQ6ZT77 177 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 VN1R4Q7Z5H5 301 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 ZCCHC24Q8N2G6 241 aaKnown RBP5.43□□□□□ -1.54
GPNMB-209ENST00000474157 TMEM75Q8N9X5 138 aa5.43□□□□□ -1.54
GPNMB-209ENST00000474157 TRAV13-2A0A0B4J235 113 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 H7BZZ5 65 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 KRTAP10-9P60411 292 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 PLGLAQ15195 96 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 C2orf83Q53S99 150 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 C10orf113Q5VZT2 155 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 CD177Q8N6Q3 437 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 FAM216BQ8N7L0 139 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 FXYD5Q96DB9 178 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 OVOL2Q9BRP0 275 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 CNFNQ9BYD5 112 aa5.42□□□□□ -1.54
GPNMB-209ENST00000474157 IGHV1-69DA0A0B4J2H0 117 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 NDUFA3O95167 84 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 IGHV4-39P01824 125 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 DAD1P61803 113 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 SNRPD3P62318 126 aaKnown RBP5.41□□□□□ -1.54
GPNMB-209ENST00000474157 DEFB134Q4QY38 66 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 LINC00322Q6ZN03 302 aaPredicted RBP5.41□□□□□ -1.54
GPNMB-209ENST00000474157 Q86TA4 180 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 Q8IYB0 196 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 SMCR5Q8TEV8 140 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 DYNLRB2Q8TF09 96 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 SCGB3A1Q96QR1 104 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 CYSTM1Q9H1C7 97 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 MOB4Q9Y3A3 225 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 ICOSQ9Y6W8 199 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 CSPG4Q6UVK1 2322 aa5.41□□□□□ -1.54
GPNMB-209ENST00000474157 FN1P02751 2386 aaKnown RBP5.41□□□□□ -1.54
GPNMB-209ENST00000474157 STAB1Q9NY15 2570 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 IGLV2-18A0A075B6J9 118 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 IGKV1D-43A0A0B4J1Z2 117 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 C11orf86A6NJI1 115 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 UBE2L6O14933 153 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 PPP1R17O96001 155 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 UBE2E1P51965 193 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.4□□□□□ -1.54
GPNMB-209ENST00000474157 FAM27BQ5VT28 67 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 SFTA2Q6UW10 78 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms