RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 KRTAP13-2Q52LG2 175 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 C9orf153Q5TBE3 101 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 TEX36Q5VZQ5 186 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 MIR17HGQ75NE6 70 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 FAM19A3Q7Z5A8 133 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 C10orf126Q8N4M7 172 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 ANKRD29Q8N6D5 301 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 C15orf53Q8NAA6 179 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 MYOZ3Q8TDC0 251 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 SLC37A2Q8TED4 501 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 NABP2Q9BQ15 211 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 HHLA3Q9XRX5 114 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 TIMM8BQ9Y5J9 83 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-212ENST00000473961 U3KQK5 164 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 COL4A5P29400 1685 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 PCDH15Q96QU1 1955 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 LOC107984156A0A0G2JMH3 177 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 TRBV6-1A0A0K0K1D8 114 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 LOC107984640A0A0U1RRK4 108 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 LINC01546A6NGU7 62 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 DPM2O94777 84 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 TRGV3P03979 118 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 ACYP1P07311 99 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 CRYGAP11844 174 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 CRYGSP22914 178 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 IFI27P40305 119 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-212ENST00000473961 UBE2D1P51668 147 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 ZNF137PP52743 207 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 GNG5P63218 68 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 PLGLB1Q02325 96 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 FAM27BQ5VT28 67 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 ARL17AQ8IVW1 177 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 ODF3Q96PU9 254 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 TRGV9Q99603 122 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 EPDR1Q9UM22 224 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 SHANK1Q9Y566 2161 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 CHCHD2Q9Y6H1 151 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-212ENST00000473961 PTPRSQ13332 1948 aa2.38□□□□□ -2.03
BRCA1-212ENST00000473961 IGKV2D-26A0A0A0MRZ7 120 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 TRAV8-1A0A0A6YYK1 113 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 A0A0B4J2C4 111 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 A6NED7 52 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 LINC01549A6NIU2 74 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 C17orf98A8MV24 154 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 A8MWP4 228 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 H3BVH4 76 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 K7EM74 188 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 SLC25A20O43772 301 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 TCL1BO95988 128 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 TRACP01848 142 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 CD7P09564 240 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 INAFM2P0DMQ5 153 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 COX7CP15954 63 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 CD24P25063 80 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 PLNP26678 52 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 HLA-DMBP28068 263 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 FCER1GP30273 86 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 TMEM258P61165 79 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 PCBD1P61457 104 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 UBE2L3P68036 154 aaKnown RBP2.37□□□□□ -2.03
BRCA1-212ENST00000473961 C4orf26Q17RF5 130 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 TMEM170BQ5T4T1 132 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 NXT2Q9NPJ8 142 aaKnown RBP2.37□□□□□ -2.03
BRCA1-212ENST00000473961 PRNDQ9UKY0 176 aa2.37□□□□□ -2.03
BRCA1-212ENST00000473961 EXPH5Q8NEV8 1989 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 SCN10AQ9Y5Y9 1956 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 COL5A1P20908 1838 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-212ENST00000473961 IGKV1OR2-108A0A075B7D4 117 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 IGLV3-32A0A0A0MS00 114 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 TINCRA0A1B0GVN0 87 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 OOSP1A8MZH6 123 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 H3BMM0 161 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 PSCAO43653 123 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 SH2D1AO60880 128 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 IGKV1-17P01599 117 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 P0DMU3 169 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 FAM231AP0DMU4 169 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 FAM231CP0DMU5 169 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 DEFB121Q5J5C9 76 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 Q8IYB0 196 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 UBE2WQ96B02 151 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 DPH3Q96FX2 82 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 FAM167A-AS1Q96KT0 104 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 ZNF714Q96N38 554 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 B9D2Q9BPU9 175 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 RPUSD1Q9UJJ7 312 aaKnown RBP2.36□□□□□ -2.03
BRCA1-212ENST00000473961 PHLDA3Q9Y5J5 127 aa2.36□□□□□ -2.03
BRCA1-212ENST00000473961 SNRNP200O75643 2136 aaKnown RBP2.36□□□□□ -2.03
BRCA1-212ENST00000473961 GOLGA4Q13439 2230 aaKnown RBP2.36□□□□□ -2.03
BRCA1-212ENST00000473961 MYO7BQ6PIF6 2116 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 ALPK2Q86TB3 2170 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 IGKV1D-17A0A075B6S4 117 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 TMSB15BA0A087X1C1 80 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 TRAV12-1A0A0B4J245 112 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 IGKV2-24A0A0C4DH68 120 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 TRBV10-2A0A0K0K1G8 114 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 TMEM30CPA0ZSE6 113 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 RBAKDNA6NC62 111 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 D6R8Y8 96 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 H3BT86 120 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms