RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PLAC8L1A1L4L8 177 aa12.96□□□□□ -0.33
VARS2-206ENST00000473916 A8MWV9 139 aa12.96□□□□□ -0.33
VARS2-206ENST00000473916 Q6ZTI0 123 aa12.96□□□□□ -0.33
VARS2-206ENST00000473916 TMEM263Q8WUH6 116 aaKnown RBP12.96□□□□□ -0.33
VARS2-206ENST00000473916 MAST4O15021 2626 aa12.96□□□□□ -0.33
VARS2-206ENST00000473916 PTH2Q96A98 100 aa12.96□□□□□ -0.34
VARS2-206ENST00000473916 TRBV6-5A0A0K0K1A5 114 aa12.95□□□□□ -0.34
VARS2-206ENST00000473916 DKK2Q9UBU2 259 aa12.95□□□□□ -0.34
VARS2-206ENST00000473916 TP73-AS1Q9UF72 201 aa12.95□□□□□ -0.34
VARS2-206ENST00000473916 PKD1L1Q8TDX9 2849 aa12.95□□□□□ -0.34
VARS2-206ENST00000473916 ORMDL2Q53FV1 153 aa12.95□□□□□ -0.34
VARS2-206ENST00000473916 PIK3CD-AS1Q5SR53 167 aa12.95□□□□□ -0.34
VARS2-206ENST00000473916 WFDC9Q8NEX5 89 aa12.95□□□□□ -0.34
VARS2-206ENST00000473916 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
VARS2-206ENST00000473916 RPL32P62910 135 aaKnown RBP12.94□□□□□ -0.34
VARS2-206ENST00000473916 C1QTNF4Q9BXJ3 329 aa12.94□□□□□ -0.34
VARS2-206ENST00000473916 TRBV27A0A0K0K1C4 114 aa12.93□□□□□ -0.34
VARS2-206ENST00000473916 RS1O15537 224 aa12.93□□□□□ -0.34
VARS2-206ENST00000473916 C2orf66Q6UXQ4 117 aa12.93□□□□□ -0.34
VARS2-206ENST00000473916 VCYO14598 125 aa12.93□□□□□ -0.34
VARS2-206ENST00000473916 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
VARS2-206ENST00000473916 LGALS9CQ6DKI2 356 aa12.93□□□□□ -0.34
VARS2-206ENST00000473916 ZFP2Q6ZN57 461 aa12.93□□□□□ -0.34
VARS2-206ENST00000473916 TOMM6Q96B49 74 aa12.93□□□□□ -0.34
VARS2-206ENST00000473916 C14orf144Q96I85 54 aa12.93□□□□□ -0.34
VARS2-206ENST00000473916 IGHV3-53P01767 116 aa12.92□□□□□ -0.34
VARS2-206ENST00000473916 PRSS1P07477 247 aa12.92□□□□□ -0.34
VARS2-206ENST00000473916 RPL39P62891 51 aaKnown RBP12.92□□□□□ -0.34
VARS2-206ENST00000473916 CMYA5Q8N3K9 4069 aa12.92□□□□□ -0.34
VARS2-206ENST00000473916 IGLC3P0DOY3 106 aa12.91□□□□□ -0.34
VARS2-206ENST00000473916 ZNF479Q96JC4 524 aa12.91□□□□□ -0.34
VARS2-206ENST00000473916 NDUFAF3Q9BU61 184 aa12.91□□□□□ -0.34
VARS2-206ENST00000473916 TCTAP57738 103 aa12.91□□□□□ -0.34
VARS2-206ENST00000473916 ODF1Q14990 250 aa12.91□□□□□ -0.34
VARS2-206ENST00000473916 RRN3P1Q2M238 152 aa12.91□□□□□ -0.34
VARS2-206ENST00000473916 C16orf74Q96GX8 76 aa12.91□□□□□ -0.34
VARS2-206ENST00000473916 MIEN1Q9BRT3 115 aa12.91□□□□□ -0.34
VARS2-206ENST00000473916 K7EMI3 77 aa12.9□□□□□ -0.34
VARS2-206ENST00000473916 TSHBP01222 138 aa12.9□□□□□ -0.34
VARS2-206ENST00000473916 DEFA6Q01524 100 aa12.9□□□□□ -0.34
VARS2-206ENST00000473916 SCGB3A1Q96QR1 104 aa12.9□□□□□ -0.34
VARS2-206ENST00000473916 KIR2DL4Q99706 377 aa12.9□□□□□ -0.34
VARS2-206ENST00000473916 EDA2RQ9HAV5 297 aa12.9□□□□□ -0.34
VARS2-206ENST00000473916 ATP5LO75964 103 aa12.89□□□□□ -0.35
VARS2-206ENST00000473916 EMP1P54849 157 aa12.89□□□□□ -0.35
VARS2-206ENST00000473916 C3orf56Q8N813 242 aa12.89□□□□□ -0.35
VARS2-206ENST00000473916 TP53TG1Q9Y2A0 90 aa12.89□□□□□ -0.35
VARS2-206ENST00000473916 RHODO00212 210 aa12.89□□□□□ -0.35
VARS2-206ENST00000473916 OXLD1Q5BKU9 147 aa12.89□□□□□ -0.35
VARS2-206ENST00000473916 NEXN-AS1Q8NBZ9 246 aa12.89□□□□□ -0.35
VARS2-206ENST00000473916 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
VARS2-206ENST00000473916 COL6A5A8TX70 2615 aa12.88□□□□□ -0.35
VARS2-206ENST00000473916 H7C1H1 209 aa12.88□□□□□ -0.35
VARS2-206ENST00000473916 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
VARS2-206ENST00000473916 STPG4Q8N801 248 aa12.88□□□□□ -0.35
VARS2-206ENST00000473916 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
VARS2-206ENST00000473916 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.88□□□□□ -0.35
VARS2-206ENST00000473916 GAGE7O76087 117 aa12.88□□□□□ -0.35
VARS2-206ENST00000473916 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
VARS2-206ENST00000473916 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
VARS2-206ENST00000473916 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
VARS2-206ENST00000473916 WIPF1O43516 503 aa12.87□□□□□ -0.35
VARS2-206ENST00000473916 ANKRD39Q53RE8 183 aa12.87□□□□□ -0.35
VARS2-206ENST00000473916 I3L3M4 83 aa12.86□□□□□ -0.35
VARS2-206ENST00000473916 TNFRSF18Q9Y5U5 241 aa12.86□□□□□ -0.35
VARS2-206ENST00000473916 RIPPLY3P57055 190 aa12.86□□□□□ -0.35
VARS2-206ENST00000473916 ZC2HC1BQ5TFG8 222 aa12.86□□□□□ -0.35
VARS2-206ENST00000473916 MRPL35Q9NZE8 188 aaKnown RBP12.86□□□□□ -0.35
VARS2-206ENST00000473916 CYSLTR1Q9Y271 337 aa12.86□□□□□ -0.35
VARS2-206ENST00000473916 X6R8D5 127 aa12.86□□□□□ -0.35
VARS2-206ENST00000473916 IGHV3-38A0A0C4DH36 116 aa12.85□□□□□ -0.35
VARS2-206ENST00000473916 HSBP1L1C9JCN9 74 aa12.85□□□□□ -0.35
VARS2-206ENST00000473916 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
VARS2-206ENST00000473916 Q6ZN92 141 aa12.85□□□□□ -0.35
VARS2-206ENST00000473916 BAALCQ8WXS3 180 aa12.85□□□□□ -0.35
VARS2-206ENST00000473916 UQCR10Q9UDW1 63 aa12.85□□□□□ -0.35
VARS2-206ENST00000473916 TRAV4A0A0B4J268 109 aa12.84□□□□□ -0.35
VARS2-206ENST00000473916 PHLDA1Q8WV24 401 aaPredicted RBP12.84□□□□□ -0.35
VARS2-206ENST00000473916 ZMAT4Q9H898 229 aa12.84□□□□□ -0.35
VARS2-206ENST00000473916 IGIPA6NJ69 53 aa12.84□□□□□ -0.35
VARS2-206ENST00000473916 ERASQ7Z444 233 aa12.84□□□□□ -0.35
VARS2-206ENST00000473916 OVOL2Q9BRP0 275 aa12.84□□□□□ -0.35
VARS2-206ENST00000473916 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
VARS2-206ENST00000473916 A0A087WX48 190 aa12.83□□□□□ -0.36
VARS2-206ENST00000473916 EREGO14944 169 aa12.83□□□□□ -0.36
VARS2-206ENST00000473916 KRTAP10-11P60412 298 aa12.83□□□□□ -0.36
VARS2-206ENST00000473916 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.36
VARS2-206ENST00000473916 OPRPNQ99935 248 aaPredicted RBP12.83□□□□□ -0.36
VARS2-206ENST00000473916 IGHV4-30-4P0DP06 118 aa12.82□□□□□ -0.36
VARS2-206ENST00000473916 RHOHQ15669 191 aa12.82□□□□□ -0.36
VARS2-206ENST00000473916 SHISA2Q6UWI4 295 aa12.82□□□□□ -0.36
VARS2-206ENST00000473916 HHLA3Q9XRX5 114 aa12.82□□□□□ -0.36
VARS2-206ENST00000473916 IGKCP01834 107 aa12.81□□□□□ -0.36
VARS2-206ENST00000473916 SLC25A29Q8N8R3 303 aa12.81□□□□□ -0.36
VARS2-206ENST00000473916 DEFB4AO15263 64 aa12.81□□□□□ -0.36
VARS2-206ENST00000473916 C20orf203Q8NBC4 194 aa12.81□□□□□ -0.36
VARS2-206ENST00000473916 PRSS29PA6NIE9 313 aa12.8□□□□□ -0.36
VARS2-206ENST00000473916 DPM2O94777 84 aa12.8□□□□□ -0.36
VARS2-206ENST00000473916 ZNRF2Q8NHG8 242 aa12.8□□□□□ -0.36
VARS2-206ENST00000473916 SNHG12Q9BXW3 62 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms