RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 TIRAPP58753 221 aa12.28□□□□□ -0.44
SNX4-204ENST00000473417 OR10G8Q8NGN5 311 aa12.28□□□□□ -0.44
SNX4-204ENST00000473417 TSKUQ8WUA8 353 aa12.28□□□□□ -0.44
SNX4-204ENST00000473417 V9GYV3 84 aa12.28□□□□□ -0.44
SNX4-204ENST00000473417 RPL36AP83881 106 aaKnown RBP12.27□□□□□ -0.45
SNX4-204ENST00000473417 OR10J3Q5JRS4 329 aa12.27□□□□□ -0.45
SNX4-204ENST00000473417 Q6ZRN7 208 aaPredicted RBP12.27□□□□□ -0.45
SNX4-204ENST00000473417 SPATA12Q7Z6I5 190 aa12.27□□□□□ -0.45
SNX4-204ENST00000473417 RPL36ALQ969Q0 106 aaKnown RBP12.27□□□□□ -0.45
SNX4-204ENST00000473417 FOXA3P55318 350 aaPredicted RBP12.26□□□□□ -0.45
SNX4-204ENST00000473417 NEXN-AS1Q8NBZ9 246 aa12.26□□□□□ -0.45
SNX4-204ENST00000473417 DPH3P1Q9H4G8 78 aa12.26□□□□□ -0.45
SNX4-204ENST00000473417 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
SNX4-204ENST00000473417 TRAV8-6A0A0B4J262 113 aa12.25□□□□□ -0.45
SNX4-204ENST00000473417 HIGD1CA8MV81 97 aa12.25□□□□□ -0.45
SNX4-204ENST00000473417 LELP1Q5T871 98 aa12.25□□□□□ -0.45
SNX4-204ENST00000473417 BORCS7Q96B45 105 aa12.25□□□□□ -0.45
SNX4-204ENST00000473417 GFRA4Q9GZZ7 299 aa12.25□□□□□ -0.45
SNX4-204ENST00000473417 UBE2D3P61077 147 aa12.24□□□□□ -0.45
SNX4-204ENST00000473417 UBE2D2P62837 147 aa12.24□□□□□ -0.45
SNX4-204ENST00000473417 SUMO4Q6EEV6 95 aa12.24□□□□□ -0.45
SNX4-204ENST00000473417 KRTAP4-5Q9BYR2 181 aa12.24□□□□□ -0.45
SNX4-204ENST00000473417 FAM231BA6NCW3 169 aa12.23□□□□□ -0.45
SNX4-204ENST00000473417 M0QY20 66 aa12.23□□□□□ -0.45
SNX4-204ENST00000473417 KRTAP10-2P60368 255 aa12.23□□□□□ -0.45
SNX4-204ENST00000473417 SMIM15Q7Z3B0 74 aa12.23□□□□□ -0.45
SNX4-204ENST00000473417 IGHV3-38A0A0C4DH36 116 aa12.22□□□□□ -0.45
SNX4-204ENST00000473417 A0A1B0GUT8 65 aa12.22□□□□□ -0.45
SNX4-204ENST00000473417 DNAH10OSP0CZ25 163 aa12.22□□□□□ -0.45
SNX4-204ENST00000473417 H7C1H1 209 aa12.21□□□□□ -0.45
SNX4-204ENST00000473417 NUP35Q8NFH5 326 aa12.21□□□□□ -0.45
SNX4-204ENST00000473417 NAT8BQ9UHF3 227 aa12.21□□□□□ -0.45
SNX4-204ENST00000473417 TRAV9-2A0A087WT02 112 aa12.2□□□□□ -0.46
SNX4-204ENST00000473417 A0A087WWC5 75 aa12.2□□□□□ -0.46
SNX4-204ENST00000473417 RASL11AQ6T310 242 aa12.2□□□□□ -0.46
SNX4-204ENST00000473417 UQCC3Q6UW78 93 aa12.2□□□□□ -0.46
SNX4-204ENST00000473417 TNFRSF18Q9Y5U5 241 aa12.2□□□□□ -0.46
SNX4-204ENST00000473417 SMIM27A0A1W2PRY6 76 aa12.19□□□□□ -0.46
SNX4-204ENST00000473417 IGHV3-30P01768 117 aa12.19□□□□□ -0.46
SNX4-204ENST00000473417 IGHV3-33P01772 117 aa12.19□□□□□ -0.46
SNX4-204ENST00000473417 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
SNX4-204ENST00000473417 IGHV3-30-5P0DP03 117 aa12.19□□□□□ -0.46
SNX4-204ENST00000473417 COMMD7Q86VX2 200 aa12.19□□□□□ -0.46
SNX4-204ENST00000473417 TRAV26-2A0A0B4J265 109 aa12.18□□□□□ -0.46
SNX4-204ENST00000473417 K7EP13 123 aa12.18□□□□□ -0.46
SNX4-204ENST00000473417 PNRC1Q12796 327 aaPredicted RBP12.18□□□□□ -0.46
SNX4-204ENST00000473417 RIGQ13278 110 aa12.18□□□□□ -0.46
SNX4-204ENST00000473417 LINC01556Q5JQF7 62 aa12.18□□□□□ -0.46
SNX4-204ENST00000473417 MAPKAPK5-AS1Q8N8E1 139 aa12.18□□□□□ -0.46
SNX4-204ENST00000473417 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.18□□□□□ -0.46
SNX4-204ENST00000473417 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
SNX4-204ENST00000473417 TMEM218A2RU14 115 aa12.17□□□□□ -0.46
SNX4-204ENST00000473417 NFE4Q86UQ8 179 aa12.17□□□□□ -0.46
SNX4-204ENST00000473417 Q8N3U1 123 aa12.17□□□□□ -0.46
SNX4-204ENST00000473417 GATD1Q8NB37 220 aa12.17□□□□□ -0.46
SNX4-204ENST00000473417 NIT2Q9NQR4 276 aa12.17□□□□□ -0.46
SNX4-204ENST00000473417 DAZ4Q86SG3 579 aaKnown RBP12.16□□□□□ -0.46
SNX4-204ENST00000473417 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
SNX4-204ENST00000473417 DAZ3Q9NR90 486 aaKnown RBP12.16□□□□□ -0.46
SNX4-204ENST00000473417 TRBV6-8A0A0A6YYG3 113 aa12.15□□□□□ -0.46
SNX4-204ENST00000473417 F8W036 122 aa12.15□□□□□ -0.46
SNX4-204ENST00000473417 PPP1R2P9O14990 202 aa12.15□□□□□ -0.46
SNX4-204ENST00000473417 ADCYAP1P18509 176 aa12.15□□□□□ -0.46
SNX4-204ENST00000473417 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.46
SNX4-204ENST00000473417 LINC00862A6NCI5 91 aa12.14□□□□□ -0.47
SNX4-204ENST00000473417 NTM-AS1Q6ZSK4 140 aa12.14□□□□□ -0.47
SNX4-204ENST00000473417 AMN1Q8IY45 258 aa12.14□□□□□ -0.47
SNX4-204ENST00000473417 RPL39LQ96EH5 51 aaKnown RBP12.14□□□□□ -0.47
SNX4-204ENST00000473417 EREGO14944 169 aa12.13□□□□□ -0.47
SNX4-204ENST00000473417 MT-ND4LP03901 98 aa12.13□□□□□ -0.47
SNX4-204ENST00000473417 NIT1Q86X76 327 aa12.13□□□□□ -0.47
SNX4-204ENST00000473417 Q8N1X5 172 aa12.13□□□□□ -0.47
SNX4-204ENST00000473417 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
SNX4-204ENST00000473417 RNF185Q96GF1 192 aa12.13□□□□□ -0.47
SNX4-204ENST00000473417 IBA57-AS1B1ANH7 110 aa12.12□□□□□ -0.47
SNX4-204ENST00000473417 RAB4AP20338 218 aa12.12□□□□□ -0.47
SNX4-204ENST00000473417 CAMPP49913 170 aa12.12□□□□□ -0.47
SNX4-204ENST00000473417 TMEM97Q5BJF2 176 aa12.12□□□□□ -0.47
SNX4-204ENST00000473417 CDPF1Q6NVV7 123 aa12.12□□□□□ -0.47
SNX4-204ENST00000473417 MRPL54Q6P161 138 aaKnown RBP12.12□□□□□ -0.47
SNX4-204ENST00000473417 ANAPC16Q96DE5 110 aa12.12□□□□□ -0.47
SNX4-204ENST00000473417 PGPEP1Q9NXJ5 209 aa12.12□□□□□ -0.47
SNX4-204ENST00000473417 URGCP-MRPS24S4R325 110 aa12.12□□□□□ -0.47
SNX4-204ENST00000473417 A0A087WTM6 91 aa12.11□□□□□ -0.47
SNX4-204ENST00000473417 TMEM262E9PQX1 116 aa12.11□□□□□ -0.47
SNX4-204ENST00000473417 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
SNX4-204ENST00000473417 FRZBQ92765 325 aa12.11□□□□□ -0.47
SNX4-204ENST00000473417 CHCHD5Q9BSY4 110 aa12.11□□□□□ -0.47
SNX4-204ENST00000473417 A0A087WX48 190 aa12.1□□□□□ -0.47
SNX4-204ENST00000473417 KCNIP4Q6PIL6 250 aa12.1□□□□□ -0.47
SNX4-204ENST00000473417 SEC11CQ9BY50 192 aa12.1□□□□□ -0.47
SNX4-204ENST00000473417 Q9HAA7 133 aa12.1□□□□□ -0.47
SNX4-204ENST00000473417 TRBV25-1A0A075B6N4 114 aa12.09□□□□□ -0.47
SNX4-204ENST00000473417 A0A1B0GW15 77 aa12.09□□□□□ -0.47
SNX4-204ENST00000473417 FUSP35637 526 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNX4-204ENST00000473417 IGHV1-24A0A0C4DH33 117 aa12.08□□□□□ -0.48
SNX4-204ENST00000473417 SMKR1H3BMG3 65 aa12.08□□□□□ -0.48
SNX4-204ENST00000473417 HBBP68871 147 aa12.08□□□□□ -0.48
SNX4-204ENST00000473417 MRAP2Q96G30 205 aa12.08□□□□□ -0.48
SNX4-204ENST00000473417 A0A1B0GXF2 115 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms