RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 OR10AG1Q8NH19 301 aa8.8□□□□□ -1
CHD3-209ENST00000473376 DNAJC30Q96LL9 226 aa8.8□□□□□ -1
CHD3-209ENST00000473376 KIF25-AS1Q9Y6Z4 181 aa8.8□□□□□ -1
CHD3-209ENST00000473376 A0A0D9SG52 128 aa8.79□□□□□ -1
CHD3-209ENST00000473376 ANGP03950 147 aaKnown RBP8.79□□□□□ -1
CHD3-209ENST00000473376 RGS21Q2M5E4 152 aa8.79□□□□□ -1
CHD3-209ENST00000473376 MPV17L2Q567V2 206 aa8.79□□□□□ -1
CHD3-209ENST00000473376 SPANXN1Q5VSR9 72 aa8.79□□□□□ -1
CHD3-209ENST00000473376 TMUB2Q71RG4 321 aa8.79□□□□□ -1
CHD3-209ENST00000473376 SMIM12Q96EX1 92 aa8.79□□□□□ -1
CHD3-209ENST00000473376 H7C1H1 209 aa8.78□□□□□ -1
CHD3-209ENST00000473376 SMIM17P0DL12 118 aa8.78□□□□□ -1
CHD3-209ENST00000473376 RPL19P84098 196 aaKnown RBP8.78□□□□□ -1
CHD3-209ENST00000473376 IQCJQ1A5X6 159 aa8.78□□□□□ -1
CHD3-209ENST00000473376 LINC01620Q4KN68 170 aa8.78□□□□□ -1
CHD3-209ENST00000473376 C15orf54Q8N8G6 183 aa8.78□□□□□ -1
CHD3-209ENST00000473376 C9orf163Q8N9P6 203 aa8.78□□□□□ -1
CHD3-209ENST00000473376 AP1S3Q96PC3 154 aa8.78□□□□□ -1
CHD3-209ENST00000473376 CHCHD5Q9BSY4 110 aa8.78□□□□□ -1
CHD3-209ENST00000473376 TRBV25-1A0A075B6N4 114 aa8.77□□□□□ -1.01
CHD3-209ENST00000473376 TRAV1-1A0A0B4J248 108 aa8.77□□□□□ -1.01
CHD3-209ENST00000473376 SCO2A0A1W2PP80 73 aa8.77□□□□□ -1.01
CHD3-209ENST00000473376 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
CHD3-209ENST00000473376 H2AFB1P0C5Y9 115 aa8.77□□□□□ -1.01
CHD3-209ENST00000473376 GZMBP10144 247 aa8.77□□□□□ -1.01
CHD3-209ENST00000473376 RPS20P60866 119 aaKnown RBP8.77□□□□□ -1.01
CHD3-209ENST00000473376 C11orf52Q96A22 123 aa8.77□□□□□ -1.01
CHD3-209ENST00000473376 TRAV8-4A0A0B4J246 113 aa8.76□□□□□ -1.01
CHD3-209ENST00000473376 A0A1B0GUV1 79 aa8.76□□□□□ -1.01
CHD3-209ENST00000473376 F5H697 171 aa8.76□□□□□ -1.01
CHD3-209ENST00000473376 P01737 135 aa8.76□□□□□ -1.01
CHD3-209ENST00000473376 NTM-AS1Q6ZSK4 140 aa8.76□□□□□ -1.01
CHD3-209ENST00000473376 FAM213BQ8TBF2 198 aa8.76□□□□□ -1.01
CHD3-209ENST00000473376 DERL1Q9BUN8 251 aa8.76□□□□□ -1.01
CHD3-209ENST00000473376 MANBALQ9NQG1 85 aa8.76□□□□□ -1.01
CHD3-209ENST00000473376 KANTRA0A1W2PQU2 76 aa8.75□□□□□ -1.01
CHD3-209ENST00000473376 F2Z2F3 143 aa8.75□□□□□ -1.01
CHD3-209ENST00000473376 M0QY20 66 aa8.75□□□□□ -1.01
CHD3-209ENST00000473376 RPL35P42766 123 aaKnown RBP8.75□□□□□ -1.01
CHD3-209ENST00000473376 RAB5CP51148 216 aa8.75□□□□□ -1.01
CHD3-209ENST00000473376 RBX1P62877 108 aa8.75□□□□□ -1.01
CHD3-209ENST00000473376 CACNG7P62955 275 aa8.75□□□□□ -1.01
CHD3-209ENST00000473376 KRTAP26-1Q6PEX3 210 aa8.75□□□□□ -1.01
CHD3-209ENST00000473376 IGHV1-24A0A0C4DH33 117 aa8.74□□□□□ -1.01
CHD3-209ENST00000473376 XKRY2A2RUG3 117 aa8.74□□□□□ -1.01
CHD3-209ENST00000473376 BCL2L11O43521 198 aa8.74□□□□□ -1.01
CHD3-209ENST00000473376 PRSS1P07477 247 aa8.74□□□□□ -1.01
CHD3-209ENST00000473376 IGLC6P0CF74 106 aa8.74□□□□□ -1.01
CHD3-209ENST00000473376 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
CHD3-209ENST00000473376 WDR73Q6P4I2 378 aa8.74□□□□□ -1.01
CHD3-209ENST00000473376 TEX46H3BTG2 121 aa8.73□□□□□ -1.01
CHD3-209ENST00000473376 HLA-DQA1P01909 254 aa8.73□□□□□ -1.01
CHD3-209ENST00000473376 CIRBPQ14011 172 aaKnown RBP8.73□□□□□ -1.01
CHD3-209ENST00000473376 EIF5AL1Q6IS14 154 aaKnown RBP8.73□□□□□ -1.01
CHD3-209ENST00000473376 SDIM1Q6ZPB5 146 aa8.73□□□□□ -1.01
CHD3-209ENST00000473376 LINC00269Q8N2A0 174 aa8.73□□□□□ -1.01
CHD3-209ENST00000473376 DAZAP1Q96EP5 407 aaKnown RBP8.73□□□□□ -1.01
CHD3-209ENST00000473376 PGLYRP4Q96LB8 373 aa8.73□□□□□ -1.01
CHD3-209ENST00000473376 BIN3Q9NQY0 253 aa8.73□□□□□ -1.01
CHD3-209ENST00000473376 C19orf71A6NCJ1 209 aa8.72□□□□□ -1.01
CHD3-209ENST00000473376 RPL37AP61513 92 aaKnown RBP8.72□□□□□ -1.01
CHD3-209ENST00000473376 REG3AQ06141 175 aa8.72□□□□□ -1.01
CHD3-209ENST00000473376 FER1L6-AS1Q8NA97 138 aa8.72□□□□□ -1.01
CHD3-209ENST00000473376 RNF185Q96GF1 192 aa8.72□□□□□ -1.01
CHD3-209ENST00000473376 PDE6DO43924 150 aa8.71□□□□□ -1.02
CHD3-209ENST00000473376 TRGC1P0CF51 173 aa8.71□□□□□ -1.02
CHD3-209ENST00000473376 CCL20P78556 96 aa8.71□□□□□ -1.02
CHD3-209ENST00000473376 C9orf62Q8N4C0 152 aa8.71□□□□□ -1.02
CHD3-209ENST00000473376 GAGE6Q13070 117 aa8.7□□□□□ -1.02
CHD3-209ENST00000473376 RASL11AQ6T310 242 aa8.7□□□□□ -1.02
CHD3-209ENST00000473376 C20orf203Q8NBC4 194 aa8.7□□□□□ -1.02
CHD3-209ENST00000473376 NIT2Q9NQR4 276 aa8.7□□□□□ -1.02
CHD3-209ENST00000473376 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.69□□□□□ -1.02
CHD3-209ENST00000473376 MUC21A0A0G2JKD1 596 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 MUC21A0A140T8X8 626 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 SMLR1H3BR10 107 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 GNG4P50150 75 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 CENPWQ5EE01 88 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 Q6ZRU5 148 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 OR2D3Q8NGH3 330 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 TMEM243Q9BU79 118 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 CNFNQ9BYD5 112 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 DPH3P1Q9H4G8 78 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 GNG13Q9P2W3 67 aa8.69□□□□□ -1.02
CHD3-209ENST00000473376 A0A1B0GV50 99 aa8.68□□□□□ -1.02
CHD3-209ENST00000473376 TAGLN2P37802 199 aaKnown RBP8.68□□□□□ -1.02
CHD3-209ENST00000473376 MEF2BQ02080 365 aaPredicted RBP8.68□□□□□ -1.02
CHD3-209ENST00000473376 SUMO4Q6EEV6 95 aa8.68□□□□□ -1.02
CHD3-209ENST00000473376 FAM210AQ96ND0 272 aa8.68□□□□□ -1.02
CHD3-209ENST00000473376 AP5S1Q9NUS5 200 aa8.67□□□□□ -1.02
CHD3-209ENST00000473376 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
CHD3-209ENST00000473376 IGHV3-64A0A075B6Q5 118 aa8.66□□□□□ -1.02
CHD3-209ENST00000473376 H7C423 109 aa8.66□□□□□ -1.02
CHD3-209ENST00000473376 IFNA1P01562 189 aa8.66□□□□□ -1.02
CHD3-209ENST00000473376 MGPP08493 103 aa8.66□□□□□ -1.02
CHD3-209ENST00000473376 CTRLP40313 264 aa8.66□□□□□ -1.02
CHD3-209ENST00000473376 CFAP161Q6P656 301 aa8.66□□□□□ -1.02
CHD3-209ENST00000473376 TPPP3Q9BW30 176 aa8.66□□□□□ -1.02
CHD3-209ENST00000473376 hDV102S1A0JD36 115 aa8.65□□□□□ -1.02
CHD3-209ENST00000473376 NCR2O95944 276 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms