RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 LINC01545Q5VT33 79 aa-0.49□□□□□ -2.49
COMMD3-211ENST00000472673 BATF3Q9NR55 127 aa-0.49□□□□□ -2.49
COMMD3-211ENST00000472673 NDUFA12Q9UI09 145 aa-0.49□□□□□ -2.49
COMMD3-211ENST00000472673 CCDC179H3BU77 68 aa-0.5□□□□□ -2.49
COMMD3-211ENST00000472673 M0R2P5 195 aa-0.5□□□□□ -2.49
COMMD3-211ENST00000472673 M0R3E3 92 aa-0.5□□□□□ -2.49
COMMD3-211ENST00000472673 EDDM3BP56851 147 aa-0.5□□□□□ -2.49
COMMD3-211ENST00000472673 DEFB109BQ30KR1 87 aa-0.5□□□□□ -2.49
COMMD3-211ENST00000472673 KRTAP19-7Q3SYF9 63 aa-0.5□□□□□ -2.49
COMMD3-211ENST00000472673 HSPB11Q9Y547 144 aa-0.5□□□□□ -2.49
COMMD3-211ENST00000472673 CSPG4Q6UVK1 2322 aa-0.5□□□□□ -2.49
COMMD3-211ENST00000472673 ACANP16112 2415 aa-0.5□□□□□ -2.49
COMMD3-211ENST00000472673 TRAV1-2A0A0B4J238 106 aa-0.51□□□□□ -2.49
COMMD3-211ENST00000472673 MUC22E2RYF6 1773 aaPredicted RBP-0.51□□□□□ -2.49
COMMD3-211ENST00000472673 YPEL1O60688 119 aa-0.51□□□□□ -2.49
COMMD3-211ENST00000472673 SPTA1P02549 2419 aa-0.51□□□□□ -2.49
COMMD3-211ENST00000472673 PARP14Q460N5 1801 aa-0.51□□□□□ -2.49
COMMD3-211ENST00000472673 MIC13Q5XKP0 118 aa-0.51□□□□□ -2.49
COMMD3-211ENST00000472673 C10orf82Q8WW14 230 aa-0.51□□□□□ -2.49
COMMD3-211ENST00000472673 SELENOSQ9BQE4 189 aa-0.51□□□□□ -2.49
COMMD3-211ENST00000472673 MYH13Q9UKX3 1938 aa-0.51□□□□□ -2.49
COMMD3-211ENST00000472673 NHSL1Q5SYE7 1610 aa-0.52□□□□□ -2.49
COMMD3-211ENST00000472673 BIVM-ERCC5R4GMW8 1640 aa-0.52□□□□□ -2.49
COMMD3-211ENST00000472673 ARAP1Q96P48 1450 aa-0.52□□□□□ -2.49
COMMD3-211ENST00000472673 IBTKQ9P2D0 1353 aaPredicted RBP-0.52□□□□□ -2.49
COMMD3-211ENST00000472673 S100A5P33763 92 aa-0.52□□□□□ -2.49
COMMD3-211ENST00000472673 WFDC2Q14508 124 aa-0.52□□□□□ -2.49
COMMD3-211ENST00000472673 MAGOHBQ96A72 148 aaKnown RBP-0.52□□□□□ -2.49
COMMD3-211ENST00000472673 PRKDCP78527 4128 aaKnown RBP-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 ZMYM4Q5VZL5 1548 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 TRBV20-1A0A075B6N2 111 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 GNG14A0A1W2PPG7 69 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 H0YJX3 145 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 PRM1P04553 51 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 NBEAP1P0C6P0 100 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 PIRTP0C851 137 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 CCDC153Q494R4 210 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 WFDC6Q9BQY6 131 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 SCP2D1Q9UJQ7 156 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 MYO7BQ6PIF6 2116 aa-0.53□□□□□ -2.49
COMMD3-211ENST00000472673 A0A0D9SFI3 127 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 TRBV10-3A0A0K0K1G6 114 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 FAM236AA0A1B0GUQ0 79 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 FAM236BA0A1B0GV22 79 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 CLPSL1A2RUU4 121 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 SPINK8P0C7L1 97 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 NCS1P62166 190 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 UBE2G1P62253 170 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 SPAG11BQ08648 103 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 RPL7L1Q6DKI1 246 aaKnown RBP-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 VSTM2AQ8TAG5 236 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 CNFNQ9BYD5 112 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 RPRMQ9NS64 109 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 TGP01266 2768 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 USF3Q68DE3 2245 aa-0.54□□□□□ -2.5
COMMD3-211ENST00000472673 TRAV22A0A0B4J277 110 aa-0.55□□□□□ -2.5
COMMD3-211ENST00000472673 FAM92AA1XBS5 289 aa-0.55□□□□□ -2.5
COMMD3-211ENST00000472673 NEFHP12036 1026 aa-0.55□□□□□ -2.5
COMMD3-211ENST00000472673 UBE2D1P51668 147 aa-0.55□□□□□ -2.5
COMMD3-211ENST00000472673 C9orf116Q5BN46 136 aaPredicted RBP-0.55□□□□□ -2.5
COMMD3-211ENST00000472673 SPANXN1Q5VSR9 72 aa-0.55□□□□□ -2.5
COMMD3-211ENST00000472673 CDK5RAP2Q96SN8 1893 aa-0.55□□□□□ -2.5
COMMD3-211ENST00000472673 PPRC1Q5VV67 1664 aaKnown RBP-0.56□□□□□ -2.5
COMMD3-211ENST00000472673 PLXNB2O15031 1838 aa-0.56□□□□□ -2.5
COMMD3-211ENST00000472673 CHD8Q9HCK8 2581 aa-0.56□□□□□ -2.5
COMMD3-211ENST00000472673 HIST1H1AQ02539 215 aaPredicted RBP-0.56□□□□□ -2.5
COMMD3-211ENST00000472673 SPTSSBQ8NFR3 76 aa-0.56□□□□□ -2.5
COMMD3-211ENST00000472673 AIF1LQ9BQI0 150 aa-0.56□□□□□ -2.5
COMMD3-211ENST00000472673 NPVFQ9HCQ7 196 aa-0.56□□□□□ -2.5
COMMD3-211ENST00000472673 LRP1BQ9NZR2 4599 aa-0.56□□□□□ -2.5
COMMD3-211ENST00000472673 WNK3Q9BYP7 1800 aa-0.57□□□□□ -2.5
COMMD3-211ENST00000472673 SIPA1L3O60292 1781 aaPredicted RBP-0.57□□□□□ -2.5
COMMD3-211ENST00000472673 IFT172Q9UG01 1749 aa-0.57□□□□□ -2.5
COMMD3-211ENST00000472673 A6NIN4 97 aa-0.57□□□□□ -2.5
COMMD3-211ENST00000472673 PITX3O75364 302 aa-0.57□□□□□ -2.5
COMMD3-211ENST00000472673 HAMPP81172 84 aa-0.57□□□□□ -2.5
COMMD3-211ENST00000472673 CFAP126Q5VTH2 177 aa-0.57□□□□□ -2.5
COMMD3-211ENST00000472673 MRPL40Q9NQ50 206 aaKnown RBP-0.57□□□□□ -2.5
COMMD3-211ENST00000472673 DBIP07108 87 aaKnown RBP-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 IGLC6P0CF74 106 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 SPRR1AP35321 89 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 MORN2Q502X0 79 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 S100A7L2Q5SY68 101 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 Q5VSD8 79 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 Q8IZM0 81 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 MMGT1Q8N4V1 131 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 SAR1AQ9NR31 198 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 SCN3BQ9NY72 215 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 MYH6P13533 1939 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 PCLOQ9Y6V0 5065 aa-0.58□□□□□ -2.5
COMMD3-211ENST00000472673 HERC1Q15751 4861 aa-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 KMT2CQ8NEZ4 4911 aaKnown RBP-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 APOC4-APOC2K7ER74 178 aa-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 NPFFO15130 113 aa-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 PIN1P1O15428 100 aa-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 BCE1O60756 84 aa-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 IL5P05113 134 aa-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 SPRR2BP35325 72 aa-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 SMIM3Q9BZL3 60 aa-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 SPANXCQ9NY87 97 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms