RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 C10orf126Q8N4M7 172 aa9.71□□□□□ -0.86
BRCA1-211ENST00000472490 DNAJC30Q96LL9 226 aa9.71□□□□□ -0.86
BRCA1-211ENST00000472490 V9GYV3 84 aa9.71□□□□□ -0.86
BRCA1-211ENST00000472490 DNAH1Q9P2D7 4330 aa9.71□□□□□ -0.86
BRCA1-211ENST00000472490 A0A1B0GUT8 65 aa9.7□□□□□ -0.86
BRCA1-211ENST00000472490 LINC00315P59091 139 aa9.7□□□□□ -0.86
BRCA1-211ENST00000472490 UBE2D3P61077 147 aa9.7□□□□□ -0.86
BRCA1-211ENST00000472490 UBE2D2P62837 147 aa9.7□□□□□ -0.86
BRCA1-211ENST00000472490 WFDC10BQ8IUB3 73 aa9.7□□□□□ -0.86
BRCA1-211ENST00000472490 Q9UF83 564 aa9.7□□□□□ -0.86
BRCA1-211ENST00000472490 NAT8BQ9UHF3 227 aa9.7□□□□□ -0.86
BRCA1-211ENST00000472490 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
BRCA1-211ENST00000472490 TMEM97Q5BJF2 176 aa9.69□□□□□ -0.86
BRCA1-211ENST00000472490 SUMO4Q6EEV6 95 aa9.69□□□□□ -0.86
BRCA1-211ENST00000472490 DAZ4Q86SG3 579 aaKnown RBP9.69□□□□□ -0.86
BRCA1-211ENST00000472490 NEXN-AS1Q8NBZ9 246 aa9.69□□□□□ -0.86
BRCA1-211ENST00000472490 FRZBQ92765 325 aa9.69□□□□□ -0.86
BRCA1-211ENST00000472490 DAZ3Q9NR90 486 aaKnown RBP9.69□□□□□ -0.86
BRCA1-211ENST00000472490 PRSS29PA6NIE9 313 aa9.68□□□□□ -0.86
BRCA1-211ENST00000472490 M0QY20 66 aa9.68□□□□□ -0.86
BRCA1-211ENST00000472490 PPP1R2P9O14990 202 aa9.68□□□□□ -0.86
BRCA1-211ENST00000472490 RTL8CO15255 209 aa9.68□□□□□ -0.86
BRCA1-211ENST00000472490 RIGQ13278 110 aa9.68□□□□□ -0.86
BRCA1-211ENST00000472490 LINC01556Q5JQF7 62 aa9.68□□□□□ -0.86
BRCA1-211ENST00000472490 RASL11AQ6T310 242 aa9.68□□□□□ -0.86
BRCA1-211ENST00000472490 NFE4Q86UQ8 179 aa9.68□□□□□ -0.86
BRCA1-211ENST00000472490 KMT2AQ03164 3969 aa9.67□□□□□ -0.86
BRCA1-211ENST00000472490 KRTAP1-5Q9BYS1 174 aa9.67□□□□□ -0.86
BRCA1-211ENST00000472490 NIT2Q9NQR4 276 aa9.67□□□□□ -0.86
BRCA1-211ENST00000472490 URGCP-MRPS24S4R325 110 aa9.67□□□□□ -0.86
BRCA1-211ENST00000472490 NACAE9PAV3 2078 aa9.67□□□□□ -0.86
BRCA1-211ENST00000472490 SMIM27A0A1W2PRY6 76 aa9.66□□□□□ -0.86
BRCA1-211ENST00000472490 KCNIP4Q6PIL6 250 aa9.66□□□□□ -0.86
BRCA1-211ENST00000472490 NUP35Q8NFH5 326 aa9.66□□□□□ -0.86
BRCA1-211ENST00000472490 TRBV6-8A0A0A6YYG3 113 aa9.65□□□□□ -0.86
BRCA1-211ENST00000472490 A0A1B0GW15 77 aa9.65□□□□□ -0.86
BRCA1-211ENST00000472490 TMEM191AQ9H0A3 160 aa9.65□□□□□ -0.86
BRCA1-211ENST00000472490 MT-ND4LP03901 98 aa9.64□□□□□ -0.87
BRCA1-211ENST00000472490 PKIAP61925 76 aa9.64□□□□□ -0.87
BRCA1-211ENST00000472490 ANAPC16Q96DE5 110 aa9.64□□□□□ -0.87
BRCA1-211ENST00000472490 CHCHD7Q9BUK0 85 aa9.64□□□□□ -0.87
BRCA1-211ENST00000472490 VPS13DQ5THJ4 4388 aa9.64□□□□□ -0.87
BRCA1-211ENST00000472490 A0A087WX48 190 aa9.63□□□□□ -0.87
BRCA1-211ENST00000472490 TMEM218A2RU14 115 aa9.63□□□□□ -0.87
BRCA1-211ENST00000472490 IGHV3-30P01768 117 aa9.63□□□□□ -0.87
BRCA1-211ENST00000472490 IGHV3-33P01772 117 aa9.63□□□□□ -0.87
BRCA1-211ENST00000472490 S100A8P05109 93 aa9.63□□□□□ -0.87
BRCA1-211ENST00000472490 IGHV3-30-3P0DP02 117 aa9.63□□□□□ -0.87
BRCA1-211ENST00000472490 IGHV3-30-5P0DP03 117 aa9.63□□□□□ -0.87
BRCA1-211ENST00000472490 COMMD7Q86VX2 200 aa9.63□□□□□ -0.87
BRCA1-211ENST00000472490 GATD1Q8NB37 220 aa9.63□□□□□ -0.87
BRCA1-211ENST00000472490 TRBV25-1A0A075B6N4 114 aa9.62□□□□□ -0.87
BRCA1-211ENST00000472490 IBA57-AS1B1ANH7 110 aa9.62□□□□□ -0.87
BRCA1-211ENST00000472490 F8W036 122 aa9.62□□□□□ -0.87
BRCA1-211ENST00000472490 LAGE3Q14657 143 aa9.62□□□□□ -0.87
BRCA1-211ENST00000472490 ELOBQ15370 118 aa9.62□□□□□ -0.87
BRCA1-211ENST00000472490 TRAV26-2A0A0B4J265 109 aa9.61□□□□□ -0.87
BRCA1-211ENST00000472490 TMEM262E9PQX1 116 aa9.61□□□□□ -0.87
BRCA1-211ENST00000472490 NIT1Q86X76 327 aa9.61□□□□□ -0.87
BRCA1-211ENST00000472490 MRAP2Q96G30 205 aa9.61□□□□□ -0.87
BRCA1-211ENST00000472490 SEC11CQ9BY50 192 aa9.61□□□□□ -0.87
BRCA1-211ENST00000472490 IGHV1-24A0A0C4DH33 117 aa9.6□□□□□ -0.87
BRCA1-211ENST00000472490 LINC00862A6NCI5 91 aa9.6□□□□□ -0.87
BRCA1-211ENST00000472490 PPP1R17O96001 155 aa9.6□□□□□ -0.87
BRCA1-211ENST00000472490 COTL1Q14019 142 aa9.6□□□□□ -0.87
BRCA1-211ENST00000472490 ATP5L2Q7Z4Y8 100 aa9.6□□□□□ -0.87
BRCA1-211ENST00000472490 CHCHD5Q9BSY4 110 aa9.6□□□□□ -0.87
BRCA1-211ENST00000472490 TRAV8-3A0A0A6YYJ7 113 aa9.59□□□□□ -0.87
BRCA1-211ENST00000472490 RAB4AP20338 218 aa9.59□□□□□ -0.87
BRCA1-211ENST00000472490 CAMPP49913 170 aa9.59□□□□□ -0.87
BRCA1-211ENST00000472490 HBBP68871 147 aa9.59□□□□□ -0.87
BRCA1-211ENST00000472490 TNP2Q05952 138 aa9.59□□□□□ -0.87
BRCA1-211ENST00000472490 IQCJQ1A5X6 159 aa9.59□□□□□ -0.87
BRCA1-211ENST00000472490 AMN1Q8IY45 258 aa9.59□□□□□ -0.87
BRCA1-211ENST00000472490 EREGO14944 169 aa9.58□□□□□ -0.88
BRCA1-211ENST00000472490 NTM-AS1Q6ZSK4 140 aa9.58□□□□□ -0.88
BRCA1-211ENST00000472490 TRBV6-5A0A0K0K1A5 114 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 A0A1B0GVY2 172 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 PSCAO43653 123 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 NCR2O95944 276 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 ADCYAP1P18509 176 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 MRPL54Q6P161 138 aaKnown RBP9.57□□□□□ -0.88
BRCA1-211ENST00000472490 Q6ZRN7 208 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-211ENST00000472490 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
BRCA1-211ENST00000472490 RNF185Q96GF1 192 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 TMEM243Q9BU79 118 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 TM2D2Q9BX73 214 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 CTDSP1Q9GZU7 261 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 ST20Q9HBF5 79 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 COX11Q9Y6N1 276 aa9.57□□□□□ -0.88
BRCA1-211ENST00000472490 SDHAF1A6NFY7 115 aa9.56□□□□□ -0.88
BRCA1-211ENST00000472490 UBE2L6O14933 153 aa9.56□□□□□ -0.88
BRCA1-211ENST00000472490 AMTP48728 403 aa9.56□□□□□ -0.88
BRCA1-211ENST00000472490 Q0VG73 95 aa9.56□□□□□ -0.88
BRCA1-211ENST00000472490 FAM104BQ5XKR9 115 aa9.56□□□□□ -0.88
BRCA1-211ENST00000472490 RMI2Q96E14 147 aa9.56□□□□□ -0.88
BRCA1-211ENST00000472490 IMMP2LQ96T52 175 aa9.56□□□□□ -0.88
BRCA1-211ENST00000472490 Q9HAA7 133 aa9.56□□□□□ -0.88
BRCA1-211ENST00000472490 A0A1B0GXF2 115 aa9.55□□□□□ -0.88
BRCA1-211ENST00000472490 I3L3M4 83 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms