RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 COX8CQ7Z4L0 72 aa5.76□□□□□ -1.49
TSPAN1-205ENST00000472170 SLC25A29Q8N8R3 303 aa5.76□□□□□ -1.49
TSPAN1-205ENST00000472170 SMIM12Q96EX1 92 aa5.76□□□□□ -1.49
TSPAN1-205ENST00000472170 ZC2HC1AQ96GY0 325 aa5.76□□□□□ -1.49
TSPAN1-205ENST00000472170 GNG13Q9P2W3 67 aa5.76□□□□□ -1.49
TSPAN1-205ENST00000472170 TMSB15BA0A087X1C1 80 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 TRAV1-1A0A0B4J248 108 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 IGHV3-38A0A0C4DH36 116 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 C20orf202A1L168 122 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 GRIFINA4D1Z8 144 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 H3BVH4 76 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 M0R381 172 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 PSCAO43653 123 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 PDE6DO43924 150 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 TRGC1P0CF51 173 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 SMIM17P0DL12 118 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 RNASE3P12724 160 aaKnown RBP5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 LINC01559Q495D7 138 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 GTSF1LQ9H1H1 148 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 C11orf21Q9P2W6 132 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 URGCP-MRPS24S4R325 110 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
TSPAN1-205ENST00000472170 HERC2O95714 4834 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 A0A1B0GVY2 172 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 C16orf90A8MZG2 172 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 CRYGDP07320 174 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 TNP2Q05952 138 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 FAM74A4Q5TZK3 123 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 SPANXN1Q5VSR9 72 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 PRR27Q6MZM9 219 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 LINC01551Q86U37 167 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 TMEM18Q96B42 140 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 MIEN1Q9BRT3 115 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 PARLQ9H300 379 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 MSRB1Q9NZV6 116 aa5.74□□□□□ -1.49
TSPAN1-205ENST00000472170 SCO2A0A1W2PP80 73 aa5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 F5H697 171 aa5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 DNAH10OSP0CZ25 163 aa5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 GNG4P50150 75 aa5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 CRIP1P50238 77 aa5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 LINC00315P59091 139 aa5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 RPL36AP83881 106 aaKnown RBP5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 MEF2BQ02080 365 aaPredicted RBP5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 PNRC1Q12796 327 aaPredicted RBP5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 LELP1Q5T871 98 aa5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 RPL36ALQ969Q0 106 aaKnown RBP5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 IMMP2LQ96T52 175 aa5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 PGPEP1Q9NXJ5 209 aa5.73□□□□□ -1.49
TSPAN1-205ENST00000472170 TRBV10-1A0A0K0K1A3 114 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 LOC100131303A0A0U1RQF7 123 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 GAGE12JA6NER3 117 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 CXCL1P09341 107 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 SCGB1A1P11684 91 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 PTTG1IPP53801 180 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 CCL20P78556 96 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 GAGE4Q13068 117 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 GAGE5Q13069 117 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 UBE2V1Q13404 147 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 GAGE13Q4V321 117 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 SPATA12Q7Z6I5 190 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 FRZBQ92765 325 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 NUDT11Q96G61 164 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 SFRP2Q96HF1 295 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 TM2D2Q9BX73 214 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 CTDSP1Q9GZU7 261 aa5.72□□□□□ -1.49
TSPAN1-205ENST00000472170 A0A087WWL8 130 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 P01737 135 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 TRGC2P03986 189 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 CACNG7P62955 275 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 ZNF56Q15929 161 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 LINC01556Q5JQF7 62 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 PET117Q6UWS5 81 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 TEX43Q6ZNM6 134 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 WFDC10BQ8IUB3 73 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 RMI2Q96E14 147 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 TPPP3Q9BW30 176 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 COX11Q9Y6N1 276 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 RYR1P21817 5038 aa5.71□□□□□ -1.5
TSPAN1-205ENST00000472170 KMT2AQ03164 3969 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 TRAV8-3A0A0A6YYJ7 113 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 F2Z2F3 143 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 H7C1H1 209 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 IGHV3-30P01768 117 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 IGHV3-33P01772 117 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 OR5AL1P0C617 328 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 IGHV3-30-3P0DP02 117 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 IGHV3-30-5P0DP03 117 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 BCL2P10415 239 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 RPL19P84098 196 aaKnown RBP5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 TMEM97Q5BJF2 176 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 CENPWQ5EE01 88 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 C11orf52Q96A22 123 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 BTF3L4Q96K17 158 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 MLST8Q9BVC4 326 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 SCRT2Q9NQ03 307 aa5.7□□□□□ -1.5
TSPAN1-205ENST00000472170 VPS13DQ5THJ4 4388 aa5.69□□□□□ -1.5
TSPAN1-205ENST00000472170 TRBV7-3A0A075B6L6 115 aa5.69□□□□□ -1.5
TSPAN1-205ENST00000472170 A0A087WX48 190 aa5.69□□□□□ -1.5
TSPAN1-205ENST00000472170 IBA57-AS1B1ANH7 110 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms