RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SMIM17P0DL12 118 aa14.77□□□□□ -0.05
C9orf3-213ENST00000471978 C15orf54Q8N8G6 183 aa14.77□□□□□ -0.05
C9orf3-213ENST00000471978 DERL1Q9BUN8 251 aa14.77□□□□□ -0.05
C9orf3-213ENST00000471978 C1orf43Q9BWL3 253 aa14.77□□□□□ -0.05
C9orf3-213ENST00000471978 CRPP02741 224 aa14.76□□□□□ -0.05
C9orf3-213ENST00000471978 PLA2G1BP04054 148 aaKnown RBP14.76□□□□□ -0.05
C9orf3-213ENST00000471978 MPV17L2Q567V2 206 aa14.76□□□□□ -0.05
C9orf3-213ENST00000471978 ENHOQ6UWT2 76 aa14.76□□□□□ -0.05
C9orf3-213ENST00000471978 LINC00528Q8N1L1 170 aa14.76□□□□□ -0.05
C9orf3-213ENST00000471978 C11orf52Q96A22 123 aa14.76□□□□□ -0.05
C9orf3-213ENST00000471978 CHCHD5Q9BSY4 110 aa14.76□□□□□ -0.05
C9orf3-213ENST00000471978 ANGP03950 147 aaKnown RBP14.75□□□□□ -0.05
C9orf3-213ENST00000471978 AP1S3Q96PC3 154 aa14.75□□□□□ -0.05
C9orf3-213ENST00000471978 KIF25-AS1Q9Y6Z4 181 aa14.75□□□□□ -0.05
C9orf3-213ENST00000471978 TRAV1-1A0A0B4J248 108 aa14.74□□□□□ -0.05
C9orf3-213ENST00000471978 PKIAP61925 76 aa14.74□□□□□ -0.05
C9orf3-213ENST00000471978 GZMBP10144 247 aa14.73□□□□□ -0.05
C9orf3-213ENST00000471978 TMEM97Q5BJF2 176 aa14.73□□□□□ -0.05
C9orf3-213ENST00000471978 CENPWQ5EE01 88 aa14.73□□□□□ -0.05
C9orf3-213ENST00000471978 SCXQ7RTU7 201 aa14.73□□□□□ -0.05
C9orf3-213ENST00000471978 TPPP3Q9BW30 176 aa14.73□□□□□ -0.05
C9orf3-213ENST00000471978 VAX2Q9UIW0 290 aa14.73□□□□□ -0.05
C9orf3-213ENST00000471978 RAB5CP51148 216 aa14.72□□□□□ -0.05
C9orf3-213ENST00000471978 C14orf177Q52M58 125 aa14.72□□□□□ -0.05
C9orf3-213ENST00000471978 NTM-AS1Q6ZSK4 140 aa14.72□□□□□ -0.05
C9orf3-213ENST00000471978 DAZAP1Q96EP5 407 aaKnown RBP14.72□□□□□ -0.05
C9orf3-213ENST00000471978 IGLV2-8P01709 118 aa14.71□□□□□ -0.05
C9orf3-213ENST00000471978 OR2D3Q8NGH3 330 aa14.71□□□□□ -0.05
C9orf3-213ENST00000471978 TEX46H3BTG2 121 aa14.7□□□□□ -0.06
C9orf3-213ENST00000471978 IGLC6P0CF74 106 aa14.7□□□□□ -0.06
C9orf3-213ENST00000471978 RPS20P60866 119 aaKnown RBP14.7□□□□□ -0.06
C9orf3-213ENST00000471978 EIF5AL1Q6IS14 154 aaKnown RBP14.7□□□□□ -0.06
C9orf3-213ENST00000471978 FER1L6-AS1Q8NA97 138 aa14.7□□□□□ -0.06
C9orf3-213ENST00000471978 CHAC1Q9BUX1 264 aa14.7□□□□□ -0.06
C9orf3-213ENST00000471978 RAB19A4D1S5 217 aa14.69□□□□□ -0.06
C9orf3-213ENST00000471978 MGPP08493 103 aa14.69□□□□□ -0.06
C9orf3-213ENST00000471978 GNG4P50150 75 aa14.69□□□□□ -0.06
C9orf3-213ENST00000471978 MIAQ16674 131 aa14.69□□□□□ -0.06
C9orf3-213ENST00000471978 TRBV25-1A0A075B6N4 114 aa14.68□□□□□ -0.06
C9orf3-213ENST00000471978 C19orf71A6NCJ1 209 aa14.68□□□□□ -0.06
C9orf3-213ENST00000471978 HLA-DQA1P01909 254 aa14.68□□□□□ -0.06
C9orf3-213ENST00000471978 GAGE6Q13070 117 aa14.68□□□□□ -0.06
C9orf3-213ENST00000471978 J3QL48 77 aa14.67□□□□□ -0.06
C9orf3-213ENST00000471978 M0QY20 66 aa14.67□□□□□ -0.06
C9orf3-213ENST00000471978 SULT1A2P50226 295 aa14.67□□□□□ -0.06
C9orf3-213ENST00000471978 RBX1P62877 108 aa14.67□□□□□ -0.06
C9orf3-213ENST00000471978 CACNG7P62955 275 aa14.67□□□□□ -0.06
C9orf3-213ENST00000471978 MEF2BQ02080 365 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-213ENST00000471978 SMIM12Q96EX1 92 aa14.67□□□□□ -0.06
C9orf3-213ENST00000471978 USP17L23D6RBM5 183 aa14.66□□□□□ -0.06
C9orf3-213ENST00000471978 H7C1H1 209 aa14.66□□□□□ -0.06
C9orf3-213ENST00000471978 PDE6DO43924 150 aa14.66□□□□□ -0.06
C9orf3-213ENST00000471978 SUMO4Q6EEV6 95 aa14.66□□□□□ -0.06
C9orf3-213ENST00000471978 CLPSL2Q6UWE3 100 aa14.66□□□□□ -0.06
C9orf3-213ENST00000471978 CIRBP-AS1Q8TBR5 109 aa14.66□□□□□ -0.06
C9orf3-213ENST00000471978 XKRY2A2RUG3 117 aa14.65□□□□□ -0.06
C9orf3-213ENST00000471978 IFNA1P01562 189 aa14.65□□□□□ -0.06
C9orf3-213ENST00000471978 P01737 135 aa14.65□□□□□ -0.06
C9orf3-213ENST00000471978 IQCJQ1A5X6 159 aa14.65□□□□□ -0.06
C9orf3-213ENST00000471978 LINC00269Q8N2A0 174 aa14.65□□□□□ -0.06
C9orf3-213ENST00000471978 DEFB104AQ8WTQ1 72 aa14.65□□□□□ -0.06
C9orf3-213ENST00000471978 PRR34Q9NV39 138 aa14.65□□□□□ -0.06
C9orf3-213ENST00000471978 MED9Q9NWA0 146 aa14.65□□□□□ -0.06
C9orf3-213ENST00000471978 IGHV1-24A0A0C4DH33 117 aa14.64□□□□□ -0.07
C9orf3-213ENST00000471978 F2Z2F3 143 aa14.64□□□□□ -0.07
C9orf3-213ENST00000471978 TRBV20OR9-2A0A075B6H5 130 aa14.62□□□□□ -0.07
C9orf3-213ENST00000471978 PRSS1P07477 247 aa14.62□□□□□ -0.07
C9orf3-213ENST00000471978 BCL2P10415 239 aa14.62□□□□□ -0.07
C9orf3-213ENST00000471978 NKX2-5P52952 324 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-213ENST00000471978 LYZL1Q6UWQ5 148 aa14.62□□□□□ -0.07
C9orf3-213ENST00000471978 BIN3Q9NQY0 253 aa14.62□□□□□ -0.07
C9orf3-213ENST00000471978 TRGC1P0CF51 173 aa14.61□□□□□ -0.07
C9orf3-213ENST00000471978 RASL11AQ6T310 242 aa14.61□□□□□ -0.07
C9orf3-213ENST00000471978 KRTAP26-1Q6PEX3 210 aa14.6□□□□□ -0.07
C9orf3-213ENST00000471978 TCTE3Q8IZS6 198 aa14.6□□□□□ -0.07
C9orf3-213ENST00000471978 KRTAP29-1A8MX34 341 aaPredicted RBP14.59□□□□□ -0.07
C9orf3-213ENST00000471978 NTF3P20783 257 aa14.59□□□□□ -0.07
C9orf3-213ENST00000471978 REG3AQ06141 175 aa14.59□□□□□ -0.07
C9orf3-213ENST00000471978 DGAT2L7PQ6IED9 249 aa14.59□□□□□ -0.07
C9orf3-213ENST00000471978 SLC51BQ86UW2 128 aa14.59□□□□□ -0.07
C9orf3-213ENST00000471978 DPH3P1Q9H4G8 78 aa14.59□□□□□ -0.07
C9orf3-213ENST00000471978 C9orf62Q8N4C0 152 aa14.58□□□□□ -0.08
C9orf3-213ENST00000471978 NUDT10Q8NFP7 164 aa14.58□□□□□ -0.08
C9orf3-213ENST00000471978 NUDT11Q96G61 164 aa14.58□□□□□ -0.08
C9orf3-213ENST00000471978 TMEM243Q9BU79 118 aa14.58□□□□□ -0.08
C9orf3-213ENST00000471978 NIT2Q9NQR4 276 aa14.58□□□□□ -0.08
C9orf3-213ENST00000471978 IGLV10-54A0A075B6I4 117 aa14.57□□□□□ -0.08
C9orf3-213ENST00000471978 KRTAP10-4P60372 401 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-213ENST00000471978 C20orf203Q8NBC4 194 aa14.57□□□□□ -0.08
C9orf3-213ENST00000471978 TAGLN2P37802 199 aaKnown RBP14.56□□□□□ -0.08
C9orf3-213ENST00000471978 CTRLP40313 264 aa14.56□□□□□ -0.08
C9orf3-213ENST00000471978 WDR73Q6P4I2 378 aa14.56□□□□□ -0.08
C9orf3-213ENST00000471978 PGLYRP4Q96LB8 373 aa14.56□□□□□ -0.08
C9orf3-213ENST00000471978 LRP1Q07954 4544 aaKnown RBP14.56□□□□□ -0.08
C9orf3-213ENST00000471978 A0A1B0GUV1 79 aa14.55□□□□□ -0.08
C9orf3-213ENST00000471978 TWIST1Q15672 202 aa14.55□□□□□ -0.08
C9orf3-213ENST00000471978 C9orf163Q8N9P6 203 aa14.55□□□□□ -0.08
C9orf3-213ENST00000471978 IGLV4-60A0A075B6I1 120 aa14.54□□□□□ -0.08
C9orf3-213ENST00000471978 CLRN3Q8NCR9 226 aa14.54□□□□□ -0.08
C9orf3-213ENST00000471978 RPP21Q9H633 154 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms