RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 ACTR3CQ9C0K3 210 aaPredicted RBP12.38□□□□□ -0.43
CCDC78-208ENST00000471861 GFRA4Q9GZZ7 299 aa12.38□□□□□ -0.43
CCDC78-208ENST00000471861 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.37□□□□□ -0.43
CCDC78-208ENST00000471861 MUC21A0A0G2JKD1 596 aa12.37□□□□□ -0.43
CCDC78-208ENST00000471861 DERL1Q9BUN8 251 aa12.37□□□□□ -0.43
CCDC78-208ENST00000471861 ZFP30Q9Y2G7 519 aa12.37□□□□□ -0.43
CCDC78-208ENST00000471861 FAM74A7A6NL05 159 aa12.36□□□□□ -0.43
CCDC78-208ENST00000471861 SSNA1O43805 119 aa12.36□□□□□ -0.43
CCDC78-208ENST00000471861 MBP02144 154 aa12.36□□□□□ -0.43
CCDC78-208ENST00000471861 SERF2P84101 59 aa12.36□□□□□ -0.43
CCDC78-208ENST00000471861 IFITM3Q01628 133 aa12.36□□□□□ -0.43
CCDC78-208ENST00000471861 HIST1H2BAQ96A08 127 aa12.36□□□□□ -0.43
CCDC78-208ENST00000471861 NDUFA13Q9P0J0 144 aa12.36□□□□□ -0.43
CCDC78-208ENST00000471861 TRBV25-1A0A075B6N4 114 aa12.35□□□□□ -0.43
CCDC78-208ENST00000471861 IQCJQ1A5X6 159 aa12.35□□□□□ -0.43
CCDC78-208ENST00000471861 TMEM97Q5BJF2 176 aa12.35□□□□□ -0.43
CCDC78-208ENST00000471861 GTSF1Q8WW33 167 aa12.35□□□□□ -0.43
CCDC78-208ENST00000471861 MARVELD1Q9BSK0 173 aa12.35□□□□□ -0.43
CCDC78-208ENST00000471861 AP5S1Q9NUS5 200 aa12.35□□□□□ -0.43
CCDC78-208ENST00000471861 TNFSF18Q9UNG2 199 aa12.35□□□□□ -0.43
CCDC78-208ENST00000471861 COX6A2Q02221 97 aa12.34□□□□□ -0.43
CCDC78-208ENST00000471861 C15orf56Q8N910 161 aa12.34□□□□□ -0.43
CCDC78-208ENST00000471861 IGLV4-60A0A075B6I1 120 aa12.33□□□□□ -0.44
CCDC78-208ENST00000471861 LTAP01374 205 aa12.33□□□□□ -0.44
CCDC78-208ENST00000471861 RAB5CP51148 216 aa12.33□□□□□ -0.44
CCDC78-208ENST00000471861 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.33□□□□□ -0.44
CCDC78-208ENST00000471861 PRSS3P2Q8NHM4 247 aa12.33□□□□□ -0.44
CCDC78-208ENST00000471861 FMC1Q96HJ9 113 aa12.33□□□□□ -0.44
CCDC78-208ENST00000471861 TRAV8-4A0A0B4J246 113 aa12.32□□□□□ -0.44
CCDC78-208ENST00000471861 MUC21A0A140T8X8 626 aa12.32□□□□□ -0.44
CCDC78-208ENST00000471861 UPK1BO75841 260 aa12.32□□□□□ -0.44
CCDC78-208ENST00000471861 P01737 135 aa12.32□□□□□ -0.44
CCDC78-208ENST00000471861 DEFA3P59666 94 aa12.32□□□□□ -0.44
CCDC78-208ENST00000471861 MAJINQ3KP22 176 aa12.32□□□□□ -0.44
CCDC78-208ENST00000471861 IGHV1-24A0A0C4DH33 117 aa12.31□□□□□ -0.44
CCDC78-208ENST00000471861 IGKV2-24A0A0C4DH68 120 aa12.31□□□□□ -0.44
CCDC78-208ENST00000471861 SNAI2O43623 268 aa12.31□□□□□ -0.44
CCDC78-208ENST00000471861 INO80EQ8NBZ0 244 aaPredicted RBP12.31□□□□□ -0.44
CCDC78-208ENST00000471861 ZNF471Q9BX82 626 aaPredicted RBP12.31□□□□□ -0.44
CCDC78-208ENST00000471861 CTXND1A0A1B0GTU2 59 aa12.3□□□□□ -0.44
CCDC78-208ENST00000471861 F5H697 171 aa12.3□□□□□ -0.44
CCDC78-208ENST00000471861 UBE2G1P62253 170 aa12.3□□□□□ -0.44
CCDC78-208ENST00000471861 LYPD6BQ8NI32 183 aa12.3□□□□□ -0.44
CCDC78-208ENST00000471861 AQP10Q96PS8 301 aa12.3□□□□□ -0.44
CCDC78-208ENST00000471861 SSBP4Q9BWG4 385 aaPredicted RBP12.3□□□□□ -0.44
CCDC78-208ENST00000471861 NDUFS6O75380 124 aaKnown RBP12.29□□□□□ -0.44
CCDC78-208ENST00000471861 SPINK6Q6UWN8 80 aa12.29□□□□□ -0.44
CCDC78-208ENST00000471861 STPG4Q8N801 248 aa12.29□□□□□ -0.44
CCDC78-208ENST00000471861 NKX6-2Q9C056 277 aaPredicted RBP12.29□□□□□ -0.44
CCDC78-208ENST00000471861 MUC2Q02817 5179 aa12.28□□□□□ -0.44
CCDC78-208ENST00000471861 CXCL1P09341 107 aa12.28□□□□□ -0.44
CCDC78-208ENST00000471861 GZMBP10144 247 aa12.28□□□□□ -0.44
CCDC78-208ENST00000471861 SRSF9Q13242 221 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC78-208ENST00000471861 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
CCDC78-208ENST00000471861 A0A1B0GUV1 79 aa12.27□□□□□ -0.45
CCDC78-208ENST00000471861 OR5AL1P0C617 328 aa12.27□□□□□ -0.45
CCDC78-208ENST00000471861 LINC00299Q6ZSB3 139 aa12.27□□□□□ -0.45
CCDC78-208ENST00000471861 A0A096LNI7 61 aa12.26□□□□□ -0.45
CCDC78-208ENST00000471861 RPS10P46783 165 aaKnown RBP12.26□□□□□ -0.45
CCDC78-208ENST00000471861 SSTP61278 116 aa12.26□□□□□ -0.45
CCDC78-208ENST00000471861 HIGD2BQ4VC39 106 aa12.26□□□□□ -0.45
CCDC78-208ENST00000471861 SPANXN1Q5VSR9 72 aa12.26□□□□□ -0.45
CCDC78-208ENST00000471861 S100ZQ8WXG8 99 aa12.26□□□□□ -0.45
CCDC78-208ENST00000471861 M0QY20 66 aa12.25□□□□□ -0.45
CCDC78-208ENST00000471861 RPL7L1Q6DKI1 246 aaKnown RBP12.25□□□□□ -0.45
CCDC78-208ENST00000471861 GAGE12HA6NDE8 117 aa12.24□□□□□ -0.45
CCDC78-208ENST00000471861 A6NHS1 94 aa12.24□□□□□ -0.45
CCDC78-208ENST00000471861 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
CCDC78-208ENST00000471861 AKR1C3P42330 323 aa12.23□□□□□ -0.45
CCDC78-208ENST00000471861 AP1S3Q96PC3 154 aa12.23□□□□□ -0.45
CCDC78-208ENST00000471861 KRTAP9-2Q9BYQ4 174 aa12.23□□□□□ -0.45
CCDC78-208ENST00000471861 Q5BKY6 102 aa12.22□□□□□ -0.45
CCDC78-208ENST00000471861 MLST8Q9BVC4 326 aa12.22□□□□□ -0.45
CCDC78-208ENST00000471861 MAP1LC3B2A6NCE7 125 aa12.21□□□□□ -0.45
CCDC78-208ENST00000471861 SMIM17P0DL12 118 aa12.21□□□□□ -0.45
CCDC78-208ENST00000471861 FHITP49789 147 aa12.21□□□□□ -0.45
CCDC78-208ENST00000471861 SUMO4Q6EEV6 95 aa12.21□□□□□ -0.45
CCDC78-208ENST00000471861 TCEAL7Q9BRU2 100 aa12.21□□□□□ -0.45
CCDC78-208ENST00000471861 MAP1LC3BQ9GZQ8 125 aa12.21□□□□□ -0.45
CCDC78-208ENST00000471861 GVQW2A0A096LPI5 108 aaPredicted RBP12.2□□□□□ -0.46
CCDC78-208ENST00000471861 MGPP08493 103 aa12.2□□□□□ -0.46
CCDC78-208ENST00000471861 SULT1A2P50226 295 aa12.2□□□□□ -0.46
CCDC78-208ENST00000471861 NKX2-5P52952 324 aaPredicted RBP12.2□□□□□ -0.46
CCDC78-208ENST00000471861 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
CCDC78-208ENST00000471861 CFAP161Q6P656 301 aa12.19□□□□□ -0.46
CCDC78-208ENST00000471861 Q6ZRP5 223 aa12.18□□□□□ -0.46
CCDC78-208ENST00000471861 STOML3Q8TAV4 291 aa12.18□□□□□ -0.46
CCDC78-208ENST00000471861 PGLYRP4Q96LB8 373 aa12.18□□□□□ -0.46
CCDC78-208ENST00000471861 IGKV3OR2-268A0A0C4DH90 116 aa12.17□□□□□ -0.46
CCDC78-208ENST00000471861 AKR1C8PQ5T2L2 129 aa12.17□□□□□ -0.46
CCDC78-208ENST00000471861 ALG5Q9Y673 324 aa12.17□□□□□ -0.46
CCDC78-208ENST00000471861 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
CCDC78-208ENST00000471861 H7C1H1 209 aa12.16□□□□□ -0.46
CCDC78-208ENST00000471861 PAGE4O60829 102 aa12.15□□□□□ -0.46
CCDC78-208ENST00000471861 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
CCDC78-208ENST00000471861 BORCS7-ASMTA0A0B4J1R7 106 aa12.14□□□□□ -0.47
CCDC78-208ENST00000471861 UBE2L6O14933 153 aa12.14□□□□□ -0.47
CCDC78-208ENST00000471861 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
CCDC78-208ENST00000471861 AMTP48728 403 aa12.14□□□□□ -0.47
CCDC78-208ENST00000471861 RASL11AQ6T310 242 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms