RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 PNRC1Q12796 327 aaPredicted RBP8.98□□□□□ -0.97
LTA-215ENST00000471842 PRR27Q6MZM9 219 aa8.98□□□□□ -0.97
LTA-215ENST00000471842 TEX43Q6ZNM6 134 aa8.98□□□□□ -0.97
LTA-215ENST00000471842 CTDSP1Q9GZU7 261 aa8.98□□□□□ -0.97
LTA-215ENST00000471842 EIF5A2Q9GZV4 153 aaKnown RBP8.98□□□□□ -0.97
LTA-215ENST00000471842 SCGB1D1O95968 90 aa8.97□□□□□ -0.97
LTA-215ENST00000471842 EVI2AP22794 236 aa8.97□□□□□ -0.97
LTA-215ENST00000471842 S100A4P26447 101 aaKnown RBP8.97□□□□□ -0.97
LTA-215ENST00000471842 FUSP35637 526 aaKnown RBP eCLIP8.97□□□□□ -0.97
LTA-215ENST00000471842 MAPKAPK5-AS1Q8N8E1 139 aa8.97□□□□□ -0.97
LTA-215ENST00000471842 ARL2-SNX15V9GYD0 113 aa8.97□□□□□ -0.97
LTA-215ENST00000471842 PCLOQ9Y6V0 5065 aa8.97□□□□□ -0.97
LTA-215ENST00000471842 A0A1W2PRE2 83 aa8.96□□□□□ -0.97
LTA-215ENST00000471842 MAP1LC3B2A6NCE7 125 aa8.96□□□□□ -0.97
LTA-215ENST00000471842 PEX7O00628 323 aa8.96□□□□□ -0.97
LTA-215ENST00000471842 SEC11BP0C7V7 166 aa8.96□□□□□ -0.97
LTA-215ENST00000471842 GATA1P15976 413 aaPredicted RBP8.96□□□□□ -0.97
LTA-215ENST00000471842 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.97
LTA-215ENST00000471842 MAP1LC3BQ9GZQ8 125 aa8.96□□□□□ -0.97
LTA-215ENST00000471842 MUC4Q99102 2169 aa8.96□□□□□ -0.98
LTA-215ENST00000471842 ZNF506Q5JVG8 444 aa8.96□□□□□ -0.98
LTA-215ENST00000471842 CFAP126Q5VTH2 177 aa8.96□□□□□ -0.98
LTA-215ENST00000471842 Q86TA4 180 aa8.96□□□□□ -0.98
LTA-215ENST00000471842 MSRB1Q9NZV6 116 aa8.96□□□□□ -0.98
LTA-215ENST00000471842 A0A1B0GV50 99 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 PGPEP1LA6NFU8 196 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 RS1O15537 224 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 CRYGDP07320 174 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 DNAH10OSP0CZ25 163 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 ASIPP42127 132 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 UBE2G1P62253 170 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 RHOHQ15669 191 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 OR10J3Q5JRS4 329 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 CST9LP1Q5W188 147 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 DPPA3Q6W0C5 159 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 Q6ZRN7 208 aaPredicted RBP8.95□□□□□ -0.98
LTA-215ENST00000471842 NFE4Q86UQ8 179 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 SLC25A29Q8N8R3 303 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 BTF3L4Q96K17 158 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 C9orf85Q96MD7 179 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 UQCR10Q9UDW1 63 aa8.95□□□□□ -0.98
LTA-215ENST00000471842 CDK2AP2O75956 126 aa8.94□□□□□ -0.98
LTA-215ENST00000471842 BATFQ16520 125 aa8.94□□□□□ -0.98
LTA-215ENST00000471842 SH2D6Q7Z4S9 175 aa8.94□□□□□ -0.98
LTA-215ENST00000471842 RYR1P21817 5038 aa8.93□□□□□ -0.98
LTA-215ENST00000471842 TMSB15BA0A087X1C1 80 aa8.93□□□□□ -0.98
LTA-215ENST00000471842 H3BVH4 76 aa8.93□□□□□ -0.98
LTA-215ENST00000471842 RNASE3P12724 160 aaKnown RBP8.93□□□□□ -0.98
LTA-215ENST00000471842 VAMP8Q9BV40 100 aa8.93□□□□□ -0.98
LTA-215ENST00000471842 TRAV8-6A0A0B4J262 113 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 GRIFINA4D1Z8 144 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 FABP5P3A8MUU1 101 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 PSCAO43653 123 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 IGHV3-30P01768 117 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 IGHV3-33P01772 117 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 IGHV3-30-3P0DP02 117 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 IGHV3-30-5P0DP03 117 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 ODF1Q14990 250 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 FAM213BQ8TBF2 198 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 ZC2HC1AQ96GY0 325 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 KRTAP4-5Q9BYR2 181 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 Q9HAA7 133 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 LAMTOR2Q9Y2Q5 125 aa8.92□□□□□ -0.98
LTA-215ENST00000471842 IGKV3D-20A0A0C4DH25 116 aa8.91□□□□□ -0.98
LTA-215ENST00000471842 IGHV3-38A0A0C4DH36 116 aa8.91□□□□□ -0.98
LTA-215ENST00000471842 TRBV6-4A0A1B0GX49 114 aa8.91□□□□□ -0.98
LTA-215ENST00000471842 GAGE12JA6NER3 117 aa8.91□□□□□ -0.98
LTA-215ENST00000471842 SH2D1AO60880 128 aa8.91□□□□□ -0.98
LTA-215ENST00000471842 MGST1P10620 155 aaKnown RBP8.91□□□□□ -0.98
LTA-215ENST00000471842 GAGE4Q13068 117 aa8.91□□□□□ -0.98
LTA-215ENST00000471842 GAGE5Q13069 117 aa8.91□□□□□ -0.98
LTA-215ENST00000471842 GAGE13Q4V321 117 aa8.91□□□□□ -0.98
LTA-215ENST00000471842 C10orf126Q8N4M7 172 aa8.91□□□□□ -0.98
LTA-215ENST00000471842 SSBP4Q9BWG4 385 aaPredicted RBP8.91□□□□□ -0.98
LTA-215ENST00000471842 ZNF727A8MUV8 499 aa8.9□□□□□ -0.98
LTA-215ENST00000471842 FAM74A4Q5TZK3 123 aa8.9□□□□□ -0.98
LTA-215ENST00000471842 SYT8Q8NBV8 401 aa8.9□□□□□ -0.98
LTA-215ENST00000471842 ATP6V0E2Q8NHE4 81 aa8.9□□□□□ -0.98
LTA-215ENST00000471842 FMC1Q96HJ9 113 aa8.9□□□□□ -0.98
LTA-215ENST00000471842 PARLQ9H300 379 aa8.9□□□□□ -0.98
LTA-215ENST00000471842 A0A087WTM6 91 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 RBFOX3A6NFN3 312 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 A8MWV9 139 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 PAGE4O60829 102 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 FAM162BQ5T6X4 162 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 Q6ZSN1 163 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 NIT1Q86X76 327 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 STPG4Q8N801 248 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 JPT2Q9H910 190 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 ABCA13Q86UQ4 5058 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 M0R381 172 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 SRP19P09132 144 aaKnown RBP8.89□□□□□ -0.99
LTA-215ENST00000471842 HNRNPA3P51991 378 aaKnown RBP8.89□□□□□ -0.99
LTA-215ENST00000471842 SCRT2Q9NQ03 307 aa8.89□□□□□ -0.99
LTA-215ENST00000471842 LRP1BQ9NZR2 4599 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 ARMS2P0C7Q2 107 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 SMIM17P0DL12 118 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 CRIP1P50238 77 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 VAMP3Q15836 100 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 SAMD10Q9BYL1 202 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms