RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 CEBPZOSA8MTT3 80 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 SH2D1AO60880 128 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 ERC2-IT1O76042 136 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 TRGV3P03979 118 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 SLC25A16P16260 332 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 IFI27P40305 119 aaPredicted RBP2.19□□□□□ -2.06
SCN3A-207ENST00000471697 XCL1P47992 114 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 NOVP48745 357 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 CAV3P56539 151 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 FXYD7P58549 80 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 ZNF816Q0VGE8 651 aaPredicted RBP2.19□□□□□ -2.06
SCN3A-207ENST00000471697 SS18Q15532 418 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 RHOHQ15669 191 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 KISS1Q15726 138 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 S100A7L2Q5SY68 101 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 PATE2Q6UY27 113 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 CNEP1R1Q8N9A8 125 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 LINC01560Q8TB33 94 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 TMEM141Q96I45 108 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 LINC00467Q9BRT7 94 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 TMEM14AQ9Y6G1 99 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 PLXNA2O75051 1894 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 COL16A1Q07092 1604 aaPredicted RBP2.19□□□□□ -2.06
SCN3A-207ENST00000471697 PCDH15Q96QU1 1955 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 DDX60Q8IY21 1712 aaKnown RBP2.19□□□□□ -2.06
SCN3A-207ENST00000471697 ADAMTS7Q9UKP4 1686 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 CABIN1Q9Y6J0 2220 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 CEP350Q5VT06 3117 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 LTBP4Q8N2S1 1624 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 TOGARAM1Q9Y4F4 1720 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 IGKV6D-41A0A0C4DH26 115 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 NDUFAF8A1L188 74 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 C19orf71A6NCJ1 209 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 A6NN06 94 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 H7BZZ5 65 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 HMGN2P05204 90 aaKnown RBP2.18□□□□□ -2.06
SCN3A-207ENST00000471697 FXYD2P54710 66 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 KRTAP24-1Q3LI83 254 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 ATP5EP2Q5VTU8 51 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 Q6JHZ5 121 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 ZNF826PQ6ZT77 177 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 PFN4Q8NHR9 129 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 ZNF563Q8TA94 476 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 SCGB3A1Q96QR1 104 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 NABP2Q9BQ15 211 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 LINC00574Q9H8X3 128 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 ZNF355PQ9NSJ1 428 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 TIMM9Q9Y5J7 89 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 PAPPA2Q9BXP8 1791 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 MGAMO43451 1857 aa2.18□□□□□ -2.06
SCN3A-207ENST00000471697 TNS1Q9HBL0 1735 aaKnown RBP2.17□□□□□ -2.06
SCN3A-207ENST00000471697 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.17□□□□□ -2.06
SCN3A-207ENST00000471697 IGLV3-9A0A075B6K5 115 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 TRBV25-1A0A075B6N4 114 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 TRBV7-1A0A0A6YYK4 115 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 LOC107984156A0A0G2JMH3 177 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 FAM168BA1KXE4 195 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 H3BVH4 76 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 LY6HO94772 140 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 LHBP01229 141 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 PPYP01298 95 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 IGHV1-69P01742 117 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 COX6CP09669 75 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 UBE2D1P51668 147 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 PLGLAQ15195 96 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 MIAQ16674 131 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 VMO1Q7Z5L0 202 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 ARL17AQ8IVW1 177 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 DYNAPQ8N1N2 210 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 LINC00269Q8N2A0 174 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 FAM19A2Q8N3H0 131 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 RPRMLQ8N4K4 120 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 MIR7-3HGQ8N6C7 128 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 SPANXA2-OT1Q8N9U9 137 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 SMCR5Q8TEV8 140 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 NHSQ6T4R5 1651 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 SHROOM3Q8TF72 1996 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 LY75O60449 1722 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 PAPPAQ13219 1627 aa2.17□□□□□ -2.06
SCN3A-207ENST00000471697 UBR3Q6ZT12 1888 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 SCN7AQ01118 1682 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 IGKV1OR2-108A0A075B7D4 117 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 SMIM27A0A1W2PRY6 76 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 PINLYPA6NC86 204 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 A6NED7 52 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 GNRH2O43555 120 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 HCRTO43612 131 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 MSMBP08118 114 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 IFI6P09912 130 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 EIF4EBP1Q13541 118 aaPredicted RBP2.16□□□□□ -2.06
SCN3A-207ENST00000471697 HIGD2BQ4VC39 106 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 LYPD5Q6UWN5 251 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 SOSTDC1Q6X4U4 206 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 CLECL1Q8IZS7 167 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 ABCA7Q8IZY2 2146 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 MUC7Q8TAX7 377 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 CLEC2BQ92478 149 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 FAM167A-AS1Q96KT0 104 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 LIMD2Q9BT23 127 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms