RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-210	ENST00000470396		A8MWL6	223 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	GAS8-AS1	O95177	125 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	ADIRF	Q15847	76 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	FAM74A3	Q4VXF1	159 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	TTC32	Q5I0X7	151 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	LINC01556	Q5JQF7	62 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	SOHLH1	Q5JUK2	328 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	SUMO4	Q6EEV6	95 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	TSKU	Q8WUA8	353 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	PGLYRP4	Q96LB8	373 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	NAT8	Q9UHE5	227 aa		4.6	□□□□□ -1.67
PSMD4-210	ENST00000470396	TRAV26-2	A0A0B4J265	109 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396		F5H697	171 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	MGP	P08493	103 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	RPL36A	P83881	106 aa	Known RBP	4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	TWIST1	Q15672	202 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	OR10J3	Q5JRS4	329 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	NTM-AS1	Q6ZSK4	140 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	GATD1	Q8NB37	220 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	RPL36AL	Q969Q0	106 aa	Known RBP	4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	DNAJC30	Q96LL9	226 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	GFRA4	Q9GZZ7	299 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	DPH3P1	Q9H4G8	78 aa		4.59	□□□□□ -1.67
PSMD4-210	ENST00000470396	TRAV8-6	A0A0B4J262	113 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	SMIM27	A0A1W2PRY6	76 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	FAM231B	A6NCW3	169 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	IGHV3-30	P01768	117 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	IGHV3-33	P01772	117 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	TRGC1	P0CF51	173 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	SMIM17	P0DL12	118 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	IGHV3-30-3	P0DP02	117 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	IGHV3-30-5	P0DP03	117 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	ADCYAP1	P18509	176 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	BTF3	P20290	206 aa	Known RBP	4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	DAZ4	Q86SG3	579 aa	Known RBP	4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	NIT1	Q86X76	327 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	NUP35	Q8NFH5	326 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	RPL39L	Q96EH5	51 aa	Known RBP	4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	RNF185	Q96GF1	192 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	DAZ3	Q9NR90	486 aa	Known RBP	4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396	DNAH8	Q96JB1	4490 aa		4.58	□□□□□ -1.68
PSMD4-210	ENST00000470396		A0A087WWC5	75 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396	TRBV6-8	A0A0A6YYG3	113 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396		A0A1B0GUT8	65 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396	IBA57-AS1	B1ANH7	110 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396		K7EP13	123 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396	KRTAP10-2	P60368	255 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396	RAB14	P61106	215 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396	RASL11A	Q6T310	242 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396	C15orf54	Q8N8G6	183 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396	DEFB104A	Q8WTQ1	72 aa		4.57	□□□□□ -1.68
PSMD4-210	ENST00000470396	FUS	P35637	526 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
PSMD4-210	ENST00000470396	RPS10	P46783	165 aa	Known RBP	4.56	□□□□□ -1.68
PSMD4-210	ENST00000470396	MPV17L2	Q567V2	206 aa		4.56	□□□□□ -1.68
PSMD4-210	ENST00000470396	AMN1	Q8IY45	258 aa		4.56	□□□□□ -1.68
PSMD4-210	ENST00000470396	C10orf126	Q8N4M7	172 aa		4.56	□□□□□ -1.68
PSMD4-210	ENST00000470396	TMEM191A	Q9H0A3	160 aa		4.56	□□□□□ -1.68
PSMD4-210	ENST00000470396	NIT2	Q9NQR4	276 aa		4.56	□□□□□ -1.68
PSMD4-210	ENST00000470396	NAT8B	Q9UHF3	227 aa		4.56	□□□□□ -1.68
PSMD4-210	ENST00000470396	TRAV9-2	A0A087WT02	112 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396		A0A1B0GXF2	115 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396	LRCOL1	A6NCL2	159 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396	SMKR1	H3BMG3	65 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396		H7C1H1	209 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396	RAB4A	P20338	218 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396	LAGE3	Q14657	143 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396	IQCJ	Q1A5X6	159 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396	MAPKAPK5-AS1	Q8N8E1	139 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396		Q9HAA7	133 aa		4.55	□□□□□ -1.68
PSMD4-210	ENST00000470396	FAT1	Q14517	4588 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396		A0A087WTM6	91 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	TMEM218	A2RU14	115 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	LINC00862	A6NCI5	91 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	NCR2	O95944	276 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	WFDC2	Q14508	124 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	UQCC3	Q6UW78	93 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	SPATA12	Q7Z6I5	190 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	NFE4	Q86UQ8	179 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	COMMD7	Q86VX2	200 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	NRAC	Q8N912	160 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396		Q8N976	141 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	KLK12	Q9UKR0	248 aa		4.54	□□□□□ -1.68
PSMD4-210	ENST00000470396	TRBV6-5	A0A0K0K1A5	114 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	SDHAF1	A6NFY7	115 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	POLR2K	P53803	58 aa	Known RBP	4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	RBX1	P62877	108 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	PNRC1	Q12796	327 aa	Predicted RBP	4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	GAGE6	Q13070	117 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	RIG	Q13278	110 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	MRPL51	Q4U2R6	128 aa	Known RBP	4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	C10orf91	Q5T1B1	145 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	FAM104B	Q5XKR9	115 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	MRPL54	Q6P161	138 aa	Known RBP	4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	ATRAID	Q6UW56	229 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	ENHO	Q6UWT2	76 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	SMIM15	Q7Z3B0	74 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	FRZB	Q92765	325 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	BORCS7	Q96B45	105 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	CHCHD5	Q9BSY4	110 aa		4.53	□□□□□ -1.68
PSMD4-210	ENST00000470396	CHCHD7	Q9BUK0	85 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms