RNA–Protein interactions for RNA: ENST00000469765.5

LCK-208, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best)

Gene LCK, Length 2,126 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-208ENST00000469765 FAM231CP0DMU5 169 aa12.64□□□□□ -0.39
LCK-208ENST00000469765 IGHV4-31P0DP07 118 aa12.64□□□□□ -0.39
LCK-208ENST00000469765 SRSF9Q13242 221 aaKnown RBP eCLIP12.64□□□□□ -0.39
LCK-208ENST00000469765 TMEM170BQ5T4T1 132 aa12.64□□□□□ -0.39
LCK-208ENST00000469765 CENPEQ02224 2701 aa12.64□□□□□ -0.39
LCK-208ENST00000469765 A0A0J9YY99 117 aa12.64□□□□□ -0.39
LCK-208ENST00000469765 KNCNA6PVL3 124 aa12.64□□□□□ -0.39
LCK-208ENST00000469765 F8W1H4 67 aa12.64□□□□□ -0.39
LCK-208ENST00000469765 C18orf65Q6ZTR6 163 aa12.64□□□□□ -0.39
LCK-208ENST00000469765 OPRPNQ99935 248 aaPredicted RBP12.64□□□□□ -0.39
LCK-208ENST00000469765 CSMD2Q7Z408 3487 aa12.63□□□□□ -0.39
LCK-208ENST00000469765 TMEM238LA0A1B0GVL6 79 aa12.63□□□□□ -0.39
LCK-208ENST00000469765 A6NJY4 79 aa12.63□□□□□ -0.39
LCK-208ENST00000469765 UBE2D1P51668 147 aa12.63□□□□□ -0.39
LCK-208ENST00000469765 SLURP1P55000 103 aa12.63□□□□□ -0.39
LCK-208ENST00000469765 COTL1Q14019 142 aa12.63□□□□□ -0.39
LCK-208ENST00000469765 WFDC2Q14508 124 aa12.63□□□□□ -0.39
LCK-208ENST00000469765 SORL1Q92673 2214 aa12.63□□□□□ -0.39
LCK-208ENST00000469765 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
LCK-208ENST00000469765 C20orf203Q8NBC4 194 aa12.62□□□□□ -0.39
LCK-208ENST00000469765 PGPEP1Q9NXJ5 209 aa12.62□□□□□ -0.39
LCK-208ENST00000469765 ZANQ9Y493 2812 aa12.62□□□□□ -0.39
LCK-208ENST00000469765 GCN1Q92616 2671 aaKnown RBP12.62□□□□□ -0.39
LCK-208ENST00000469765 I3L3M4 83 aa12.62□□□□□ -0.39
LCK-208ENST00000469765 KRTAP10-9P60411 292 aa12.62□□□□□ -0.39
LCK-208ENST00000469765 NFE4Q86UQ8 179 aa12.62□□□□□ -0.39
LCK-208ENST00000469765 CR1P17927 2039 aa12.61□□□□□ -0.39
LCK-208ENST00000469765 DEFB131AP59861 70 aa12.61□□□□□ -0.39
LCK-208ENST00000469765 HIST2H2BCQ6DN03 193 aa12.61□□□□□ -0.39
LCK-208ENST00000469765 AMELXQ99217 191 aa12.61□□□□□ -0.39
LCK-208ENST00000469765 SPANXB1Q9NS25 103 aaPredicted RBP12.61□□□□□ -0.39
LCK-208ENST00000469765 MRPL16Q9NX20 251 aaKnown RBP12.6□□□□□ -0.39
LCK-208ENST00000469765 POLQO75417 2590 aa12.6□□□□□ -0.39
LCK-208ENST00000469765 A8MTW9 85 aa12.59□□□□□ -0.39
LCK-208ENST00000469765 PRO0461Q9UI25 63 aa12.59□□□□□ -0.39
LCK-208ENST00000469765 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
LCK-208ENST00000469765 RBMY1BA6NDE4 496 aaKnown RBP12.59□□□□□ -0.39
LCK-208ENST00000469765 RBMY1EA6NEQ0 496 aaKnown RBP12.59□□□□□ -0.39
LCK-208ENST00000469765 J3QQQ9 107 aa12.59□□□□□ -0.39
LCK-208ENST00000469765 RBMY1DP0C7P1 496 aaKnown RBP12.59□□□□□ -0.39
LCK-208ENST00000469765 HTN1P15515 57 aa12.59□□□□□ -0.39
LCK-208ENST00000469765 GAGE13Q4V321 117 aa12.59□□□□□ -0.39
LCK-208ENST00000469765 H3BMM0 161 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 SLC25A29Q8N8R3 303 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 EDA2RQ9HAV5 297 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 IGLV4-3A0A075B6K6 122 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 IGHV3-73A0A0B4J1V6 119 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 TSPAN13O95857 204 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 IGHV3-30P01768 117 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 IGHV3-30-5P0DP03 117 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 LGALS3P17931 250 aaKnown RBP12.58□□□□□ -0.4
LCK-208ENST00000469765 MTURNQ8N3F0 131 aa12.58□□□□□ -0.4
LCK-208ENST00000469765 APOMO95445 188 aa12.57□□□□□ -0.4
LCK-208ENST00000469765 PROK1P58294 105 aa12.57□□□□□ -0.4
LCK-208ENST00000469765 Q8N2B8 174 aa12.57□□□□□ -0.4
LCK-208ENST00000469765 LEPROTO15243 131 aa12.56□□□□□ -0.4
LCK-208ENST00000469765 ZNF22P17026 224 aaPredicted RBP12.56□□□□□ -0.4
LCK-208ENST00000469765 SH2D6Q7Z4S9 175 aa12.56□□□□□ -0.4
LCK-208ENST00000469765 ABCA12Q86UK0 2595 aa12.56□□□□□ -0.4
LCK-208ENST00000469765 PRM2P04554 102 aa12.56□□□□□ -0.4
LCK-208ENST00000469765 Q5PR19 223 aa12.56□□□□□ -0.4
LCK-208ENST00000469765 NDUFA11Q86Y39 141 aa12.56□□□□□ -0.4
LCK-208ENST00000469765 MXRA5Q9NR99 2828 aa12.56□□□□□ -0.4
LCK-208ENST00000469765 ETDBQ3ZM63 59 aa12.55□□□□□ -0.4
LCK-208ENST00000469765 TMEM61Q8N0U2 210 aa12.55□□□□□ -0.4
LCK-208ENST00000469765 DUX3Q96PT4 197 aa12.55□□□□□ -0.4
LCK-208ENST00000469765 NBPF19A0A087WUL8 3843 aa12.55□□□□□ -0.4
LCK-208ENST00000469765 TRAV2A0A0B4J234 112 aa12.55□□□□□ -0.4
LCK-208ENST00000469765 A0A0J9YXV3 536 aa12.55□□□□□ -0.4
LCK-208ENST00000469765 RHODO00212 210 aa12.55□□□□□ -0.4
LCK-208ENST00000469765 SPAG8Q99932 426 aaPredicted RBP12.55□□□□□ -0.4
LCK-208ENST00000469765 VCX2Q9H322 139 aa12.55□□□□□ -0.4
LCK-208ENST00000469765 PEMTQ9UBM1 199 aa12.54□□□□□ -0.4
LCK-208ENST00000469765 PRRC2AP48634 2157 aaKnown RBP12.54□□□□□ -0.4
LCK-208ENST00000469765 M0R2P5 195 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
LCK-208ENST00000469765 FASNP49327 2511 aaKnown RBP12.53□□□□□ -0.4
LCK-208ENST00000469765 A8MWV9 139 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 CFC1BP0CG36 223 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 CFC1P0CG37 223 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 UBE2D3P61077 147 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 UBE2D2P62837 147 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 SFTA2Q6UW10 78 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 C4orf3Q8WVX3 66 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 FAM104AQ969W3 186 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 APCP25054 2843 aa12.53□□□□□ -0.4
LCK-208ENST00000469765 CREBBPQ92793 2442 aa12.52□□□□□ -0.4
LCK-208ENST00000469765 IGHV3-64A0A075B6Q5 118 aa12.52□□□□□ -0.4
LCK-208ENST00000469765 LOC107984156A0A0G2JMH3 177 aa12.52□□□□□ -0.4
LCK-208ENST00000469765 ZNF415Q09FC8 603 aa12.52□□□□□ -0.4
LCK-208ENST00000469765 DEFB113Q30KQ7 82 aa12.52□□□□□ -0.4
LCK-208ENST00000469765 ARL17AQ8IVW1 177 aa12.52□□□□□ -0.4
LCK-208ENST00000469765 MAP6D1Q9H9H5 199 aa12.52□□□□□ -0.4
LCK-208ENST00000469765 PYGO1Q9Y3Y4 419 aa12.52□□□□□ -0.4
LCK-208ENST00000469765 NACAE9PAV3 2078 aa12.52□□□□□ -0.41
LCK-208ENST00000469765 CD28P10747 220 aa12.52□□□□□ -0.41
LCK-208ENST00000469765 PSMB2P49721 201 aa12.51□□□□□ -0.41
LCK-208ENST00000469765 KHDC1LQ5JSQ8 128 aa12.51□□□□□ -0.41
LCK-208ENST00000469765 Q6ZSN1 163 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms