RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 SCXQ7RTU7 201 aa9.65□□□□□ -0.86
SDCCAG3-209ENST00000468963 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
SDCCAG3-209ENST00000468963 SPANXN1Q5VSR9 72 aa9.64□□□□□ -0.87
SDCCAG3-209ENST00000468963 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
SDCCAG3-209ENST00000468963 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
SDCCAG3-209ENST00000468963 RPL35P42766 123 aaKnown RBP9.63□□□□□ -0.87
SDCCAG3-209ENST00000468963 SSTP61278 116 aa9.63□□□□□ -0.87
SDCCAG3-209ENST00000468963 C15orf54Q8N8G6 183 aa9.63□□□□□ -0.87
SDCCAG3-209ENST00000468963 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
SDCCAG3-209ENST00000468963 TRAV1-1A0A0B4J248 108 aa9.62□□□□□ -0.87
SDCCAG3-209ENST00000468963 F5H697 171 aa9.62□□□□□ -0.87
SDCCAG3-209ENST00000468963 IGLV2-8P01709 118 aa9.62□□□□□ -0.87
SDCCAG3-209ENST00000468963 KRTAP10-4P60372 401 aaPredicted RBP9.62□□□□□ -0.87
SDCCAG3-209ENST00000468963 EIF5AP63241 154 aaKnown RBP9.62□□□□□ -0.87
SDCCAG3-209ENST00000468963 C11orf52Q96A22 123 aa9.62□□□□□ -0.87
SDCCAG3-209ENST00000468963 DERL1Q9BUN8 251 aa9.62□□□□□ -0.87
SDCCAG3-209ENST00000468963 KRTAP29-1A8MX34 341 aaPredicted RBP9.61□□□□□ -0.87
SDCCAG3-209ENST00000468963 ANGP03950 147 aaKnown RBP9.61□□□□□ -0.87
SDCCAG3-209ENST00000468963 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
SDCCAG3-209ENST00000468963 TMEM97Q5BJF2 176 aa9.61□□□□□ -0.87
SDCCAG3-209ENST00000468963 CIRBP-AS1Q8TBR5 109 aa9.61□□□□□ -0.87
SDCCAG3-209ENST00000468963 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
SDCCAG3-209ENST00000468963 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
SDCCAG3-209ENST00000468963 PRR34Q9NV39 138 aa9.61□□□□□ -0.87
SDCCAG3-209ENST00000468963 J3QL48 77 aa9.6□□□□□ -0.87
SDCCAG3-209ENST00000468963 IGLC6P0CF74 106 aa9.6□□□□□ -0.87
SDCCAG3-209ENST00000468963 GZMBP10144 247 aa9.6□□□□□ -0.87
SDCCAG3-209ENST00000468963 PKIAP61925 76 aa9.6□□□□□ -0.87
SDCCAG3-209ENST00000468963 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
SDCCAG3-209ENST00000468963 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.6□□□□□ -0.87
SDCCAG3-209ENST00000468963 MANBALQ9NQG1 85 aa9.6□□□□□ -0.87
SDCCAG3-209ENST00000468963 GNG13Q9P2W3 67 aa9.6□□□□□ -0.87
SDCCAG3-209ENST00000468963 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
SDCCAG3-209ENST00000468963 M0QY20 66 aa9.59□□□□□ -0.87
SDCCAG3-209ENST00000468963 CRPP02741 224 aa9.59□□□□□ -0.87
SDCCAG3-209ENST00000468963 SMIM17P0DL12 118 aa9.59□□□□□ -0.87
SDCCAG3-209ENST00000468963 RBX1P62877 108 aa9.59□□□□□ -0.87
SDCCAG3-209ENST00000468963 MIAQ16674 131 aa9.59□□□□□ -0.87
SDCCAG3-209ENST00000468963 RAB19A4D1S5 217 aa9.58□□□□□ -0.88
SDCCAG3-209ENST00000468963 USP17L23D6RBM5 183 aa9.58□□□□□ -0.88
SDCCAG3-209ENST00000468963 PRSS1P07477 247 aa9.58□□□□□ -0.88
SDCCAG3-209ENST00000468963 RAB5CP51148 216 aa9.58□□□□□ -0.88
SDCCAG3-209ENST00000468963 RPS20P60866 119 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-209ENST00000468963 GAGE6Q13070 117 aa9.58□□□□□ -0.88
SDCCAG3-209ENST00000468963 IQCJQ1A5X6 159 aa9.58□□□□□ -0.88
SDCCAG3-209ENST00000468963 CENPWQ5EE01 88 aa9.58□□□□□ -0.88
SDCCAG3-209ENST00000468963 AP1S3Q96PC3 154 aa9.58□□□□□ -0.88
SDCCAG3-209ENST00000468963 LINC00269Q8N2A0 174 aa9.57□□□□□ -0.88
SDCCAG3-209ENST00000468963 FER1L6-AS1Q8NA97 138 aa9.57□□□□□ -0.88
SDCCAG3-209ENST00000468963 OR2D3Q8NGH3 330 aa9.57□□□□□ -0.88
SDCCAG3-209ENST00000468963 DAZAP1Q96EP5 407 aaKnown RBP9.57□□□□□ -0.88
SDCCAG3-209ENST00000468963 HMCN2Q8NDA2 5059 aa9.57□□□□□ -0.88
SDCCAG3-209ENST00000468963 TRBV25-1A0A075B6N4 114 aa9.56□□□□□ -0.88
SDCCAG3-209ENST00000468963 SULT1A2P50226 295 aa9.56□□□□□ -0.88
SDCCAG3-209ENST00000468963 CACNG7P62955 275 aa9.56□□□□□ -0.88
SDCCAG3-209ENST00000468963 SUMO4Q6EEV6 95 aa9.56□□□□□ -0.88
SDCCAG3-209ENST00000468963 DGAT2L7PQ6IED9 249 aa9.56□□□□□ -0.88
SDCCAG3-209ENST00000468963 SMIM12Q96EX1 92 aa9.56□□□□□ -0.88
SDCCAG3-209ENST00000468963 IGHV1-24A0A0C4DH33 117 aa9.55□□□□□ -0.88
SDCCAG3-209ENST00000468963 C9orf163Q8N9P6 203 aa9.55□□□□□ -0.88
SDCCAG3-209ENST00000468963 TPPP3Q9BW30 176 aa9.55□□□□□ -0.88
SDCCAG3-209ENST00000468963 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
SDCCAG3-209ENST00000468963 F2Z2F3 143 aa9.54□□□□□ -0.88
SDCCAG3-209ENST00000468963 H7C1H1 209 aa9.54□□□□□ -0.88
SDCCAG3-209ENST00000468963 HLA-DQA1P01909 254 aa9.54□□□□□ -0.88
SDCCAG3-209ENST00000468963 MGPP08493 103 aa9.54□□□□□ -0.88
SDCCAG3-209ENST00000468963 GNG4P50150 75 aa9.54□□□□□ -0.88
SDCCAG3-209ENST00000468963 MEF2BQ02080 365 aaPredicted RBP9.54□□□□□ -0.88
SDCCAG3-209ENST00000468963 EIF5AL1Q6IS14 154 aaKnown RBP9.54□□□□□ -0.88
SDCCAG3-209ENST00000468963 C20orf203Q8NBC4 194 aa9.54□□□□□ -0.88
SDCCAG3-209ENST00000468963 A0A1B0GUV1 79 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 TEX46H3BTG2 121 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 PDE6DO43924 150 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 P01737 135 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 WDR73Q6P4I2 378 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 RASL11AQ6T310 242 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 CLPSL2Q6UWE3 100 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 LYZL1Q6UWQ5 148 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 C9orf62Q8N4C0 152 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 MED9Q9NWA0 146 aa9.53□□□□□ -0.88
SDCCAG3-209ENST00000468963 XKRY2A2RUG3 117 aa9.52□□□□□ -0.89
SDCCAG3-209ENST00000468963 NTF3P20783 257 aa9.52□□□□□ -0.89
SDCCAG3-209ENST00000468963 NKX2-5P52952 324 aaPredicted RBP9.52□□□□□ -0.89
SDCCAG3-209ENST00000468963 REG3AQ06141 175 aa9.52□□□□□ -0.89
SDCCAG3-209ENST00000468963 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.89
SDCCAG3-209ENST00000468963 NUDT10Q8NFP7 164 aa9.52□□□□□ -0.89
SDCCAG3-209ENST00000468963 NUDT11Q96G61 164 aa9.52□□□□□ -0.89
SDCCAG3-209ENST00000468963 NIT2Q9NQR4 276 aa9.52□□□□□ -0.89
SDCCAG3-209ENST00000468963 IGLV4-60A0A075B6I1 120 aa9.51□□□□□ -0.89
SDCCAG3-209ENST00000468963 IFNA1P01562 189 aa9.51□□□□□ -0.89
SDCCAG3-209ENST00000468963 CLRN3Q8NCR9 226 aa9.51□□□□□ -0.89
SDCCAG3-209ENST00000468963 GFRA4Q9GZZ7 299 aa9.51□□□□□ -0.89
SDCCAG3-209ENST00000468963 DPH3P1Q9H4G8 78 aa9.51□□□□□ -0.89
SDCCAG3-209ENST00000468963 BIN3Q9NQY0 253 aa9.51□□□□□ -0.89
SDCCAG3-209ENST00000468963 IGLV10-54A0A075B6I4 117 aa9.5□□□□□ -0.89
SDCCAG3-209ENST00000468963 TRAV8-4A0A0B4J246 113 aa9.5□□□□□ -0.89
SDCCAG3-209ENST00000468963 OXTP01178 125 aa9.5□□□□□ -0.89
SDCCAG3-209ENST00000468963 TRGC1P0CF51 173 aa9.5□□□□□ -0.89
SDCCAG3-209ENST00000468963 BCL2P10415 239 aa9.5□□□□□ -0.89
SDCCAG3-209ENST00000468963 PGLYRP4Q96LB8 373 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms