RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 DAZAP1Q96EP5 407 aaKnown RBP14.35□□□□□ -0.11
TTC28-204ENST00000468807 CRPP02741 224 aa14.34□□□□□ -0.11
TTC28-204ENST00000468807 C1QBP02746 253 aa14.34□□□□□ -0.11
TTC28-204ENST00000468807 GZMBP10144 247 aa14.34□□□□□ -0.11
TTC28-204ENST00000468807 RAB5CP51148 216 aa14.34□□□□□ -0.11
TTC28-204ENST00000468807 C15orf54Q8N8G6 183 aa14.34□□□□□ -0.11
TTC28-204ENST00000468807 Q8N976 141 aa14.34□□□□□ -0.11
TTC28-204ENST00000468807 C11orf52Q96A22 123 aa14.34□□□□□ -0.11
TTC28-204ENST00000468807 AP1S3Q96PC3 154 aa14.34□□□□□ -0.11
TTC28-204ENST00000468807 CHCHD5Q9BSY4 110 aa14.34□□□□□ -0.11
TTC28-204ENST00000468807 FLG2Q5D862 2391 aaPredicted RBP14.34□□□□□ -0.11
TTC28-204ENST00000468807 Q0VG73 95 aa14.33□□□□□ -0.12
TTC28-204ENST00000468807 MPV17L2Q567V2 206 aa14.33□□□□□ -0.12
TTC28-204ENST00000468807 TRAV1-1A0A0B4J248 108 aa14.32□□□□□ -0.12
TTC28-204ENST00000468807 ANGP03950 147 aaKnown RBP14.32□□□□□ -0.12
TTC28-204ENST00000468807 MGPP08493 103 aa14.32□□□□□ -0.12
TTC28-204ENST00000468807 OR2D3Q8NGH3 330 aa14.32□□□□□ -0.12
TTC28-204ENST00000468807 C1orf43Q9BWL3 253 aa14.32□□□□□ -0.12
TTC28-204ENST00000468807 RAB19A4D1S5 217 aa14.31□□□□□ -0.12
TTC28-204ENST00000468807 GNG4P50150 75 aa14.31□□□□□ -0.12
TTC28-204ENST00000468807 FER1L6-AS1Q8NA97 138 aa14.31□□□□□ -0.12
TTC28-204ENST00000468807 IFNA1P01562 189 aa14.3□□□□□ -0.12
TTC28-204ENST00000468807 RPS20P60866 119 aaKnown RBP14.3□□□□□ -0.12
TTC28-204ENST00000468807 KIF25-AS1Q9Y6Z4 181 aa14.3□□□□□ -0.12
TTC28-204ENST00000468807 IGLV2-8P01709 118 aa14.29□□□□□ -0.12
TTC28-204ENST00000468807 SULT1A2P50226 295 aa14.29□□□□□ -0.12
TTC28-204ENST00000468807 MEF2BQ02080 365 aaPredicted RBP14.29□□□□□ -0.12
TTC28-204ENST00000468807 ATRAIDQ6UW56 229 aa14.29□□□□□ -0.12
TTC28-204ENST00000468807 ENHOQ6UWT2 76 aa14.29□□□□□ -0.12
TTC28-204ENST00000468807 Q6ZSA8 131 aa14.29□□□□□ -0.12
TTC28-204ENST00000468807 MED9Q9NWA0 146 aa14.29□□□□□ -0.12
TTC28-204ENST00000468807 PKIAP61925 76 aa14.28□□□□□ -0.12
TTC28-204ENST00000468807 TMEM97Q5BJF2 176 aa14.28□□□□□ -0.12
TTC28-204ENST00000468807 PDE6DO43924 150 aa14.27□□□□□ -0.13
TTC28-204ENST00000468807 P01737 135 aa14.27□□□□□ -0.13
TTC28-204ENST00000468807 NTM-AS1Q6ZSK4 140 aa14.27□□□□□ -0.13
TTC28-204ENST00000468807 TRBV25-1A0A075B6N4 114 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 XKRY2A2RUG3 117 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 C19orf71A6NCJ1 209 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 HLA-DQA1P01909 254 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 IGLC6P0CF74 106 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 CACNG7P62955 275 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 GAGE6Q13070 117 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 CLPSL2Q6UWE3 100 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 LINC00528Q8N1L1 170 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 VAX2Q9UIW0 290 aa14.26□□□□□ -0.13
TTC28-204ENST00000468807 PLA2G1BP04054 148 aaKnown RBP14.25□□□□□ -0.13
TTC28-204ENST00000468807 C14orf177Q52M58 125 aa14.25□□□□□ -0.13
TTC28-204ENST00000468807 SUMO4Q6EEV6 95 aa14.25□□□□□ -0.13
TTC28-204ENST00000468807 TCTE3Q8IZS6 198 aa14.25□□□□□ -0.13
TTC28-204ENST00000468807 SMIM12Q96EX1 92 aa14.25□□□□□ -0.13
TTC28-204ENST00000468807 H7C1H1 209 aa14.24□□□□□ -0.13
TTC28-204ENST00000468807 BCL2P10415 239 aa14.24□□□□□ -0.13
TTC28-204ENST00000468807 SCXQ7RTU7 201 aa14.24□□□□□ -0.13
TTC28-204ENST00000468807 SLC51BQ86UW2 128 aa14.24□□□□□ -0.13
TTC28-204ENST00000468807 M0QY20 66 aa14.23□□□□□ -0.13
TTC28-204ENST00000468807 RBX1P62877 108 aa14.23□□□□□ -0.13
TTC28-204ENST00000468807 BIN3Q9NQY0 253 aa14.23□□□□□ -0.13
TTC28-204ENST00000468807 TRBV20OR9-2A0A075B6H5 130 aa14.22□□□□□ -0.13
TTC28-204ENST00000468807 IGHV1-24A0A0C4DH33 117 aa14.22□□□□□ -0.13
TTC28-204ENST00000468807 F2Z2F3 143 aa14.22□□□□□ -0.13
TTC28-204ENST00000468807 NKX2-5P52952 324 aaPredicted RBP14.22□□□□□ -0.13
TTC28-204ENST00000468807 MIAQ16674 131 aa14.22□□□□□ -0.13
TTC28-204ENST00000468807 LYZL1Q6UWQ5 148 aa14.22□□□□□ -0.13
TTC28-204ENST00000468807 LINC00269Q8N2A0 174 aa14.22□□□□□ -0.13
TTC28-204ENST00000468807 USP17L23D6RBM5 183 aa14.21□□□□□ -0.13
TTC28-204ENST00000468807 TRGC1P0CF51 173 aa14.21□□□□□ -0.13
TTC28-204ENST00000468807 IQCJQ1A5X6 159 aa14.2□□□□□ -0.14
TTC28-204ENST00000468807 NTF3P20783 257 aa14.19□□□□□ -0.14
TTC28-204ENST00000468807 RASL11AQ6T310 242 aa14.19□□□□□ -0.14
TTC28-204ENST00000468807 DEFB104AQ8WTQ1 72 aa14.19□□□□□ -0.14
TTC28-204ENST00000468807 CHAC1Q9BUX1 264 aa14.19□□□□□ -0.14
TTC28-204ENST00000468807 DPH3P1Q9H4G8 78 aa14.19□□□□□ -0.14
TTC28-204ENST00000468807 NUDT10Q8NFP7 164 aa14.18□□□□□ -0.14
TTC28-204ENST00000468807 NUDT11Q96G61 164 aa14.18□□□□□ -0.14
TTC28-204ENST00000468807 J3QL48 77 aa14.17□□□□□ -0.14
TTC28-204ENST00000468807 TAGLN2P37802 199 aaKnown RBP14.17□□□□□ -0.14
TTC28-204ENST00000468807 TWIST1Q15672 202 aa14.17□□□□□ -0.14
TTC28-204ENST00000468807 PRR34Q9NV39 138 aa14.17□□□□□ -0.14
TTC28-204ENST00000468807 IGLV10-54A0A075B6I4 117 aa14.16□□□□□ -0.14
TTC28-204ENST00000468807 CIRBP-AS1Q8TBR5 109 aa14.16□□□□□ -0.14
TTC28-204ENST00000468807 TMEM243Q9BU79 118 aa14.16□□□□□ -0.14
TTC28-204ENST00000468807 RNASE7Q9H1E1 156 aaKnown RBP14.16□□□□□ -0.14
TTC28-204ENST00000468807 RPP21Q9H633 154 aaKnown RBP14.16□□□□□ -0.14
TTC28-204ENST00000468807 REG3AQ06141 175 aa14.15□□□□□ -0.14
TTC28-204ENST00000468807 C9orf62Q8N4C0 152 aa14.15□□□□□ -0.14
TTC28-204ENST00000468807 NIT2Q9NQR4 276 aa14.15□□□□□ -0.14
TTC28-204ENST00000468807 PRSS1P07477 247 aa14.14□□□□□ -0.15
TTC28-204ENST00000468807 CTRLP40313 264 aa14.14□□□□□ -0.15
TTC28-204ENST00000468807 hCG_2014768A0A024R1R8 64 aa14.13□□□□□ -0.15
TTC28-204ENST00000468807 K7EN84 100 aa14.13□□□□□ -0.15
TTC28-204ENST00000468807 UBE2L6O14933 153 aa14.13□□□□□ -0.15
TTC28-204ENST00000468807 C20orf203Q8NBC4 194 aa14.13□□□□□ -0.15
TTC28-204ENST00000468807 OCC1Q8TAD7 63 aa14.13□□□□□ -0.15
TTC28-204ENST00000468807 WDR73Q6P4I2 378 aa14.12□□□□□ -0.15
TTC28-204ENST00000468807 AKAP14Q86UN6 197 aa14.12□□□□□ -0.15
TTC28-204ENST00000468807 IGLV4-60A0A075B6I1 120 aa14.11□□□□□ -0.15
TTC28-204ENST00000468807 AMTP48728 403 aa14.11□□□□□ -0.15
TTC28-204ENST00000468807 COTL1Q14019 142 aa14.11□□□□□ -0.15
TTC28-204ENST00000468807 KRTAP26-1Q6PEX3 210 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms